SUPERFAMILY 1.75 HMM library and genome assignments server


Pectobacterium atrosepticum SCRI1043 superfamily assignments

Taxonomy
Taxonomy browser entry

Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pectobacterium; Pectobacterium atrosepticum; Pectobacterium atrosepticum SCRI1043

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Fasta format sequences
Domain assignments


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Assignment statistics

Sequences: 4472 total
3146 (70 %) with assignment
323 average length
66 % amino acid coverage
Domains: 4618 total
821 unique superfamilies
926 unique families
303 average length
5.6 average superfamily size
82 % formed by duplication
Domain combinations: 556 domain pairs
1240 unique architectures

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Superfamily assignments

Domains

Proteins

Architectures

Families

SCOP link

Superfamilies

316 275 69 11 SCOP 52540 P-loop containing nucleoside triphosphate hydrolases
141 139 26 9 SCOP 46785 "Winged helix" DNA-binding domain
139 139 9 1 SCOP 53850 Periplasmic binding protein-like II
134 130 33 10 SCOP 51735 NAD(P)-binding Rossmann-fold domains
106 96 7 1 SCOP 161098 MetI-like
78 61 20 1 SCOP 46689 Homeodomain-like
70 68 5 2 SCOP 103473 MFS general substrate transporter
50 49 12 19 SCOP 53335 S-adenosyl-L-methionine-dependent methyltransferases
50 49 8 0 SCOP 47413 lambda repressor-like DNA-binding domains
48 47 7 5 SCOP 53383 PLP-dependent transferases
46 33 22 5 SCOP 50249 Nucleic acid-binding proteins
44 27 11 7 SCOP 53067 Actin-like ATPase domain
39 38 8 7 SCOP 52833 Thioredoxin-like
37 7 7 1 SCOP 52777 CoA-dependent acyltransferases
36 35 9 3 SCOP 55729 Acyl-CoA N-acyltransferases (Nat)
36 34 12 1 SCOP 52172 CheY-like
36 36 6 1 SCOP 58104 Methyl-accepting chemotaxis protein (MCP) signaling domain
34 33 8 4 SCOP 53474 alpha/beta-Hydrolases
34 30 16 5 SCOP 51905 FAD/NAD(P)-binding domain
34 18 8 6 SCOP 52518 Thiamin diphosphate-binding fold (THDP-binding)
34 33 21 3 SCOP 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
31 31 5 1 SCOP 53822 Periplasmic binding protein-like I
29 29 4 4 SCOP 56935 Porins
28 28 13 4 SCOP 51445 (Trans)glycosidases
27 16 9 1 SCOP 56801 Acetyl-CoA synthetase-like
27 18 6 1 SCOP 103481 Multidrug resistance efflux transporter EmrE
26 13 9 1 SCOP 47336 ACP-like
26 26 5 1 SCOP 56349 DNA breaking-rejoining enzymes
24 24 7 5 SCOP 53448 Nucleotide-diphospho-sugar transferases
24 24 7 6 SCOP 56784 HAD-like
23 23 4 5 SCOP 51569 Aldolase
23 20 17 7 SCOP 54211 Ribosomal protein S5 domain 2-like
23 17 12 4 SCOP 55021 ACT-like
23 20 6 7 SCOP 48179 6-phosphogluconate dehydrogenase C-terminal domain-like
22 22 7 1 SCOP 54862 4Fe-4S ferredoxins
22 17 7 1 SCOP 48452 TPR-like
22 13 4 2 SCOP 53901 Thiolase-like
21 7 3 1 SCOP 82693 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
20 20 5 5 SCOP 51182 RmlC-like cupins
19 19 7 2 SCOP 53187 Zn-dependent exopeptidases
19 19 2 4 SCOP 53807 "Helical backbone" metal receptor
19 19 5 2 SCOP 46894 C-terminal effector domain of the bipartite response regulators
18 18 14 3 SCOP 52374 Nucleotidylyl transferase
18 18 7 5 SCOP 53098 Ribonuclease H-like
18 17 9 4 SCOP 52402 Adenine nucleotide alpha hydrolases-like
18 17 2 1 SCOP 81345 ABC transporter involved in vitamin B12 uptake, BtuC
18 10 5 1 SCOP 82866 Multidrug efflux transporter AcrB transmembrane domain
18 18 5 4 SCOP 55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
17 17 3 4 SCOP 52218 Flavoproteins
17 16 6 6 SCOP 100950 NagB/RpiA/CoA transferase-like
17 17 2 5 SCOP 53756 UDP-Glycosyltransferase/glycogen phosphorylase
17 17 4 5 SCOP 51126 Pectin lyase-like
17 17 10 1 SCOP 55073 Nucleotide cyclase
17 14 10 0 SCOP 55785 PYP-like sensor domain (PAS domain)
17 16 2 0 SCOP 50331 MOP-like
16 15 11 3 SCOP 56059 Glutathione synthetase ATP-binding domain-like
16 16 9 3 SCOP 52317 Class I glutamine amidotransferase-like
16 15 5 2 SCOP 50129 GroES-like
16 16 4 3 SCOP 102114 Radical SAM enzymes
16 16 9 1 SCOP 47384 Homodimeric domain of signal transducing histidine kinase
15 15 10 2 SCOP 55681 Class II aaRS and biotin synthetases
15 14 4 3 SCOP 55811 Nudix
15 14 3 5 SCOP 54637 Thioesterase/thiol ester dehydrase-isomerase
15 15 4 3 SCOP 54427 NTF2-like
15 15 11 2 SCOP 55781 GAF domain-like
15 12 7 1 SCOP 57783 Zinc beta-ribbon
15 12 3 1 SCOP 88659 Sigma3 and sigma4 domains of RNA polymerase sigma factors
15 15 2 2 SCOP 51604 Enolase C-terminal domain-like
15 15 3 1 SCOP 90123 ABC transporter transmembrane region
15 15 2 1 SCOP 54826 Enolase N-terminal domain-like
14 14 6 6 SCOP 51621 Phosphoenolpyruvate/pyruvate domain
14 14 8 2 SCOP 53955 Lysozyme-like
14 12 5 1 SCOP 111369 HlyD-like secretion proteins
14 7 3 1 SCOP 82714 Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
13 13 3 2 SCOP 53720 ALDH-like
13 13 3 3 SCOP 56281 Metallo-hydrolase/oxidoreductase
13 13 4 1 SCOP 51395 FMN-linked oxidoreductases
13 12 8 2 SCOP 54534 FKBP-like
13 13 4 1 SCOP 55604 Glucose permease domain IIB
13 13 1 1 SCOP 47616 GST C-terminal domain-like
12 12 6 3 SCOP 56300 Metallo-dependent phosphatases
12 11 4 4 SCOP 54909 Dimeric alpha+beta barrel
12 12 3 1 SCOP 88946 Sigma2 domain of RNA polymerase sigma factors
12 12 2 0 SCOP 48498 Tetracyclin repressor-like, C-terminal domain
12 7 2 0 SCOP 69279 Phage tail proteins
11 11 4 5 SCOP 51556 Metallo-dependent hydrolases
11 11 4 6 SCOP 51161 Trimeric LpxA-like enzymes
11 11 6 4 SCOP 56235 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
11 11 7 2 SCOP 109604 HD-domain/PDEase-like
11 10 9 2 SCOP 50447 Translation proteins
11 11 6 0 SCOP 141868 EAL domain-like
11 11 4 3 SCOP 52467 DHS-like NAD/FAD-binding domain
11 4 3 2 SCOP 63411 LuxS/MPP-like metallohydrolase
11 11 4 1 SCOP 48008 GntR ligand-binding domain-like
11 11 2 0 SCOP 47170 Aspartate receptor, ligand-binding domain
11 10 6 3 SCOP 52440 PreATP-grasp domain
11 11 1 1 SCOP 55031 Bacterial exopeptidase dimerisation domain
10 10 4 4 SCOP 53613 Ribokinase-like
10 10 4 3 SCOP 53697 SIS domain
10 10 4 4 SCOP 55120 Pseudouridine synthase
10 10 1 5 SCOP 51658 Xylose isomerase-like
10 10 2 1 SCOP 53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes
10 9 4 3 SCOP 52096 ClpP/crotonase
10 8 5 2 SCOP 50891 Cyclophilin-like
10 10 1 2 SCOP 54593 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
10 10 5 2 SCOP 50692 ADC-like
10 10 2 1 SCOP 56954 Outer membrane efflux proteins (OEP)
10 9 4 1 SCOP 52794 PTS system IIB component-like
10 5 2 1 SCOP 63520 PTS-regulatory domain, PRD
10 10 3 1 SCOP 51215 Regulatory protein AraC
10 9 7 3 SCOP 63380 Riboflavin synthase domain-like
9 9 4 1 SCOP 56112 Protein kinase-like (PK-like)
9 9 6 1 SCOP 57716 Glucocorticoid receptor-like (DNA-binding domain)
9 9 5 4 SCOP 75217 alpha/beta knot
9 9 6 2 SCOP 56601 beta-lactamase/transpeptidase-like
9 9 3 1 SCOP 47598 Ribbon-helix-helix
9 9 3 2 SCOP 54523 Pili subunits
9 7 6 1 SCOP 51230 Single hybrid motif
9 5 4 1 SCOP 56024 Phospholipase D/nuclease
9 6 5 1 SCOP 50156 PDZ domain-like
9 9 4 1 SCOP 53706 Formate dehydrogenase/DMSO reductase, domains 1-3
9 6 6 1 SCOP 54980 EF-G C-terminal domain-like
9 7 6 1 SCOP 103190 Sensory domain-like
9 3 2 0 SCOP 53738 Phosphoglucomutase, first 3 domains
8 8 3 1 SCOP 56731 DNA primase core
8 8 3 2 SCOP 53271 PRTase-like
8 8 3 2 SCOP 55174 Alpha-L RNA-binding motif
8 8 4 1 SCOP 51261 Duplicated hybrid motif
8 8 6 2 SCOP 54292 2Fe-2S ferredoxin-like
8 8 2 2 SCOP 56796 Dehydroquinate synthase-like
8 8 3 2 SCOP 50475 FMN-binding split barrel
8 8 3 1 SCOP 51430 NAD(P)-linked oxidoreductase
8 8 3 2 SCOP 51197 Clavaminate synthase-like
8 8 5 0 SCOP 54631 CBS-domain pair
8 7 5 2 SCOP 81301 Nucleotidyltransferase
8 7 7 3 SCOP 47781 RuvA domain 2-like
8 5 2 1 SCOP 81273 H-NS histone-like proteins
8 4 1 1 SCOP 53681 Aspartate/glutamate racemase
8 4 2 0 SCOP 116726 TrkA C-terminal domain-like
7 6 5 3 SCOP 53927 Cytidine deaminase-like
7 6 2 4 SCOP 51366 Ribulose-phoshate binding barrel
7 7 3 4 SCOP 53659 Isocitrate/Isopropylmalate dehydrogenase-like
7 7 5 4 SCOP 55486 Metalloproteases ("zincins"), catalytic domain
7 7 6 2 SCOP 53633 Carbamate kinase-like
7 7 1 1 SCOP 48557 L-aspartase-like
7 6 4 2 SCOP 52821 Rhodanese/Cell cycle control phosphatase
7 7 5 1 SCOP 51419 PLP-binding barrel
7 7 4 3 SCOP 50182 Sm-like ribonucleoproteins
7 7 4 1 SCOP 46955 Putative DNA-binding domain
7 6 3 1 SCOP 55804 Phoshotransferase/anion transport protein
7 7 1 2 SCOP 74653 TolA/TonB C-terminal domain
7 7 1 0 SCOP 141452 Hcp1-like
7 7 6 1 SCOP 46548 alpha-helical ferredoxin
7 7 4 3 SCOP 56176 FAD-binding/transporter-associated domain-like
7 7 4 2 SCOP 52922 TK C-terminal domain-like
7 5 2 0 SCOP 159871 YdgH-like
6 6 4 3 SCOP 50104 Translation proteins SH3-like domain
6 6 3 4 SCOP 52980 Restriction endonuclease-like
6 6 5 4 SCOP 74650 Galactose mutarotase-like
6 5 4 1 SCOP 52151 FabD/lysophospholipase-like
6 6 3 1 SCOP 52283 Formate/glycerate dehydrogenase catalytic domain-like
6 6 3 3 SCOP 51998 PFL-like glycyl radical enzymes
6 6 1 1 SCOP 118215 Proton glutamate symport protein
6 6 3 2 SCOP 56925 OMPA-like
6 6 5 3 SCOP 52343 Ferredoxin reductase-like, C-terminal NADP-linked domain
6 6 3 1 SCOP 53244 MurD-like peptide ligases, peptide-binding domain
6 6 3 1 SCOP 51246 Rudiment single hybrid motif
6 6 6 1 SCOP 47323 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
6 6 3 0 SCOP 158472 HAMP domain-like
6 6 3 2 SCOP 53623 MurD-like peptide ligases, catalytic domain
5 5 4 0 SCOP 69593 Glycerol-3-phosphate (1)-acyltransferase
5 5 1 0 SCOP 89447 AbrB/MazE/MraZ-like
5 5 2 2 SCOP 47240 Ferritin-like
5 5 1 2 SCOP 56655 Carbohydrate phosphatase
5 5 1 2 SCOP 53254 Phosphoglycerate mutase-like
5 4 4 1 SCOP 81296 E set domains
5 4 2 2 SCOP 51726 UROD/MetE-like
5 5 2 2 SCOP 53649 Alkaline phosphatase-like
5 5 2 1 SCOP 56322 ADC synthase
5 5 2 0 SCOP 54001 Cysteine proteinases
5 5 2 1 SCOP 52499 Isochorismatase-like hydrolases
5 5 4 1 SCOP 49785 Galactose-binding domain-like
5 5 2 0 SCOP 56317 Carbon-nitrogen hydrolase
5 5 2 1 SCOP 88713 Glycoside hydrolase/deacetylase
5 5 2 2 SCOP 55620 Tetrahydrobiopterin biosynthesis enzymes-like
5 5 4 2 SCOP 52016 LeuD/IlvD-like
5 5 1 1 SCOP 51679 Bacterial luciferase-like
5 5 5 1 SCOP 88697 PUA domain-like
5 5 2 1 SCOP 64288 Chorismate lyase-like
5 5 3 2 SCOP 75005 Arabinanase/levansucrase/invertase
5 5 1 0 SCOP 69349 Phage fibre proteins
5 5 3 4 SCOP 53223 Aminoacid dehydrogenase-like, N-terminal domain
5 4 4 1 SCOP 56014 Nitrite and sulphite reductase 4Fe-4S domain-like
5 5 4 1 SCOP 51011 Glycosyl hydrolase domain
5 4 2 1 SCOP 56042 PurM C-terminal domain-like
5 5 4 1 SCOP 56425 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
5 4 2 1 SCOP 55326 PurM N-terminal domain-like
5 5 1 0 SCOP 69255 gp5 N-terminal domain-like
4 4 2 1 SCOP 53167 Purine and uridine phosphorylases
4 4 3 1 SCOP 53790 Tetrapyrrole methylase
4 3 3 2 SCOP 54197 HIT-like
4 4 2 2 SCOP 82649 SufE/NifU
4 4 1 1 SCOP 47729 IHF-like DNA-binding proteins
4 4 4 2 SCOP 109998 Triger factor/SurA peptide-binding domain-like
4 4 1 2 SCOP 82784 OsmC-like
4 4 3 2 SCOP 55821 YrdC/RibB
4 4 1 1 SCOP 111283 Putative modulator of DNA gyrase, PmbA/TldD
4 4 2 3 SCOP 48150 DNA-glycosylase
4 4 2 1 SCOP 89360 HesB-like domain
4 4 1 1 SCOP 64518 Phase 1 flagellin
4 4 1 1 SCOP 55469 FMN-dependent nitroreductase-like
4 4 4 2 SCOP 47226 Histidine-containing phosphotransfer domain, HPT domain
4 4 3 1 SCOP 88723 PIN domain-like
4 4 4 1 SCOP 53328 Formyltransferase
4 4 1 1 SCOP 56752 D-aminoacid aminotransferase-like PLP-dependent enzymes
4 4 2 0 SCOP 49899 Concanavalin A-like lectins/glucanases
4 4 1 1 SCOP 53639 AraD/HMP-PK domain-like
4 4 1 3 SCOP 52972 ITPase-like
4 4 2 0 SCOP 48208 Six-hairpin glycosidases
4 4 1 1 SCOP 81343 Fumarate reductase respiratory complex transmembrane subunits
4 2 2 0 SCOP 55008 HMA, heavy metal-associated domain
4 3 2 1 SCOP 69118 AhpD-like
4 4 3 1 SCOP 50494 Trypsin-like serine proteases
4 4 2 1 SCOP 143120 YefM-like
4 4 1 1 SCOP 143011 RelE-like
4 4 3 1 SCOP 46767 Methylated DNA-protein cysteine methyltransferase, C-terminal domain
4 2 2 1 SCOP 49503 Cupredoxins
4 2 2 0 SCOP 81901 HCP-like
4 4 2 3 SCOP 54913 GlnB-like
4 4 2 0 SCOP 88874 Receptor-binding domain of short tail fibre protein gp12
4 4 3 2 SCOP 53218 Molybdenum cofactor biosynthesis proteins
4 2 2 0 SCOP 116734 DNA methylase specificity domain
4 3 3 0 SCOP 50969 YVTN repeat-like/Quinoprotein amine dehydrogenase
4 4 3 1 SCOP 103088 OmpA-like
4 4 2 0 SCOP 51338 Composite domain of metallo-dependent hydrolases
4 3 3 0 SCOP 101386 all-alpha NTP pyrophosphatases
4 3 3 1 SCOP 54814 Prokaryotic type KH domain (KH-domain type II)
4 4 2 1 SCOP 48695 Multiheme cytochromes
4 4 2 0 SCOP 141523 L,D-transpeptidase catalytic domain-like
4 4 1 0 SCOP 46973 Enzyme IIa from lactose specific PTS, IIa-lac
4 2 2 0 SCOP 54106 LysM domain
4 4 2 2 SCOP 48019 post-AAA+ oligomerization domain-like
4 4 3 1 SCOP 56719 Type II DNA topoisomerase
4 4 4 1 SCOP 51971 Nucleotide-binding domain
4 4 4 0 SCOP 81665 Calcium ATPase, transmembrane domain M
4 3 3 1 SCOP 52210 Succinyl-CoA synthetase domains
4 4 3 2 SCOP 50621 Alanine racemase C-terminal domain-like
4 4 1 0 SCOP 50151 SacY-like RNA-binding domain
4 3 3 0 SCOP 117892 Band 7/SPFH domain
4 3 3 1 SCOP 55124 Nitrite/Sulfite reductase N-terminal domain-like
4 4 3 2 SCOP 81271 TGS-like
4 3 3 1 SCOP 55048 Probable ACP-binding domain of malonyl-CoA ACP transacylase
4 4 4 0 SCOP 81653 Calcium ATPase, transduction domain A
4 4 3 0 SCOP 160467 PH0987 N-terminal domain-like
3 3 2 1 SCOP 55594 HPr-like
3 3 2 1 SCOP 57829 Zn-binding ribosomal proteins
3 3 1 2 SCOP 111331 NAD kinase/diacylglycerol kinase-like
3 3 3 1 SCOP 55920 Creatinase/aminopeptidase
3 3 2 2 SCOP 46946 S13-like H2TH domain
3 3 1 2 SCOP 143800 L28p-like
3 3 1 1 SCOP 75620 Release factor
3 3 1 1 SCOP 51695 PLC-like phosphodiesterases
3 3 2 2 SCOP 56770 HydA/Nqo6-like
3 3 1 0 SCOP 54285 MoaD/ThiS
3 3 2 1 SCOP 117143 Flagellar hook protein flgE
3 3 3 1 SCOP 50685 Barwin-like endoglucanases
3 3 1 1 SCOP 75169 DsrEFH-like
3 3 3 2 SCOP 56672 DNA/RNA polymerases
3 3 1 0 SCOP 48317 Acid phosphatase/Vanadium-dependent haloperoxidase
3 3 1 1 SCOP 53590 Nucleoside hydrolase
3 3 1 0 SCOP 48403 Ankyrin repeat
3 3 1 1 SCOP 69572 Activating enzymes of the ubiquitin-like proteins
3 3 2 2 SCOP 54506 Diaminopimelate epimerase-like
3 3 1 1 SCOP 53774 Glutaminase/Asparaginase
3 3 3 2 SCOP 51306 LexA/Signal peptidase
3 2 2 2 SCOP 47819 HRDC-like
3 3 3 0 SCOP 110849 ParB/Sulfiredoxin
3 3 2 1 SCOP 52266 SGNH hydrolase
3 3 1 1 SCOP 81342 Transmembrane di-heme cytochromes
3 3 3 1 SCOP 52954 Class II aaRS ABD-related
3 3 2 0 SCOP 52091 SpoIIaa-like
3 3 2 0 SCOP 102712 JAB1/MPN domain
3 3 3 0 SCOP 50341 CheW-like
3 3 3 0 SCOP 117916 Fe-S cluster assembly (FSCA) domain-like
3 3 3 1 SCOP 89550 PHP domain-like
3 3 2 1 SCOP 55166 Hedgehog/DD-peptidase
3 3 1 1 SCOP 51206 cAMP-binding domain-like
3 3 2 2 SCOP 56762 HydB/Nqo4-like
3 3 2 1 SCOP 50800 PK beta-barrel domain-like
3 3 3 1 SCOP 53732 Aconitase iron-sulfur domain
3 3 2 1 SCOP 56219 DNase I-like
3 3 2 1 SCOP 82689 Mechanosensitive channel protein MscS (YggB), C-terminal domain
3 3 1 0 SCOP 160719 gpW/gp25-like
3 3 3 0 SCOP 48600 Chorismate mutase II
3 3 1 2 SCOP 89392 Prokaryotic lipoproteins and lipoprotein localization factors
3 3 3 3 SCOP 52335 Methylglyoxal synthase-like
3 3 2 1 SCOP 101801 Surface presentation of antigens (SPOA)
3 2 2 1 SCOP 81593 Nucleotidyltransferase substrate binding subunit/domain
3 3 3 0 SCOP 53146 Nitrogenase accessory factor-like
3 2 2 0 SCOP 142906 YjbR-like
3 3 3 0 SCOP 50974 Nitrous oxide reductase, N-terminal domain
3 3 3 1 SCOP 56091 DNA ligase/mRNA capping enzyme, catalytic domain
3 3 3 1 SCOP 46565 Chaperone J-domain
3 3 2 1 SCOP 50465 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
3 3 1 1 SCOP 55424 FAD/NAD-linked reductases, dimerisation (C-terminal) domain
3 3 2 0 SCOP 46589 tRNA-binding arm
3 1 1 1 SCOP 55979 DNA clamp
3 3 3 1 SCOP 56712 Prokaryotic type I DNA topoisomerase
3 3 2 1 SCOP 81923 Double Clp-N motif
3 1 1 0 SCOP 82185 Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
3 3 3 1 SCOP 52009 Phosphohistidine domain
3 1 1 1 SCOP 55973 S-adenosylmethionine synthetase
3 3 2 1 SCOP 55816 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
3 3 2 1 SCOP 52418 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
3 3 1 2 SCOP 55060 GHMP Kinase, C-terminal domain
3 3 2 0 SCOP 81891 Poly A polymerase C-terminal region-like
3 3 2 1 SCOP 46977 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
3 3 2 0 SCOP 160964 MalF N-terminal region-like
3 3 2 0 SCOP 110997 Sporulation related repeat
3 3 2 1 SCOP 47648 Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
3 3 1 2 SCOP 56327 LDH C-terminal domain-like
3 3 1 1 SCOP 51984 MurCD N-terminal domain
3 3 2 0 SCOP 53155 Methylated DNA-protein cysteine methyltransferase domain
3 3 2 0 SCOP 54373 FAD-linked reductases, C-terminal domain
3 3 2 1 SCOP 82861 Mechanosensitive channel protein MscS (YggB), transmembrane region
3 3 3 1 SCOP 50677 ValRS/IleRS/LeuRS editing domain
3 3 2 0 SCOP 55957 Phosphoglucomutase, C-terminal domain
3 2 2 1 SCOP 55666 Ribonuclease PH domain 2-like
2 2 2 2 SCOP 48013 NusB-like
2 2 1 2 SCOP 52141 Uracil-DNA glycosylase-like
2 2 2 1 SCOP 75304 Amidase signature (AS) enzymes
2 2 2 1 SCOP 142433 CinA-like
2 2 1 1 SCOP 53137 Translational machinery components
2 2 1 0 SCOP 57840 Ribosomal protein L36
2 2 2 0 SCOP 56214 4'-phosphopantetheinyl transferase
2 2 1 1 SCOP 53784 Phosphofructokinase
2 2 2 2 SCOP 53597 Dihydrofolate reductase-like
2 2 2 1 SCOP 89623 Ribose/Galactose isomerase RpiB/AlsB
2 2 2 1 SCOP 109755 PhoU-like
2 2 1 1 SCOP 51351 Triosephosphate isomerase (TIM)
2 2 1 2 SCOP 64484 beta and beta-prime subunits of DNA dependent RNA-polymerase
2 2 2 2 SCOP 51730 FAD-linked oxidoreductase
2 2 1 1 SCOP 51283 dUTPase-like
2 2 2 2 SCOP 50715 Ribosomal protein L25-like
2 2 2 1 SCOP 51412 Inosine monophosphate dehydrogenase (IMPDH)
2 2 1 1 SCOP 55205 EPT/RTPC-like
2 2 1 1 SCOP 55298 YjgF-like
2 2 1 1 SCOP 82657 BolA-like
2 2 1 1 SCOP 48576 Terpenoid synthases
2 2 1 0 SCOP 49764 HSP20-like chaperones
2 2 1 0 SCOP 48371 ARM repeat
2 2 2 1 SCOP 55315 L30e-like
2 2 1 1 SCOP 48256 Citrate synthase
2 1 1 1 SCOP 48113 Heme-dependent peroxidases
2 2 2 1 SCOP 82282 Homocysteine S-methyltransferase
2 2 2 1 SCOP 56529 FAH
2 2 1 0 SCOP 55961 Bet v1-like
2 2 1 0 SCOP 56399 ADP-ribosylation
2 2 1 0 SCOP 103378 2-methylcitrate dehydratase PrpD
2 2 1 1 SCOP 101960 Stabilizer of iron transporter SufD
2 2 2 2 SCOP 55931 Glutamine synthetase/guanido kinase
2 2 2 1 SCOP 46458 Globin-like
2 2 1 0 SCOP 102405 MCP/YpsA-like
2 2 1 0 SCOP 143243 Nqo5-like
2 2 2 1 SCOP 51717 Dihydropteroate synthetase-like
2 2 1 0 SCOP 69635 Type III secretory system chaperone-like
2 2 2 0 SCOP 55718 SCP-like
2 2 1 1 SCOP 48264 Cytochrome P450
2 2 1 0 SCOP 55724 Mog1p/PsbP-like
2 2 1 0 SCOP 55331 Tautomerase/MIF
2 2 2 0 SCOP 82771 GIY-YIG endonuclease
2 2 2 1 SCOP 50022 ISP domain
2 2 1 1 SCOP 50118 Cell growth inhibitor/plasmid maintenance toxic component
2 2 2 0 SCOP 158682 TerB-like
2 2 2 1 SCOP 110857 Gamma-glutamyl cyclotransferase-like
2 2 2 1 SCOP 55154 CYTH-like phosphatases
2 2 2 1 SCOP 52507 Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
2 2 1 1 SCOP 161111 Cation efflux protein transmembrane domain-like
2 2 1 0 SCOP 109854 DinB/YfiT-like putative metalloenzymes
2 2 2 2 SCOP 54736 ClpS-like
2 2 2 0 SCOP 159894 YgaC/TfoX-N like
2 2 1 0 SCOP 49879 SMAD/FHA domain
2 2 1 1 SCOP 69047 Hypothetical protein YjbJ
2 2 1 0 SCOP 117396 TM1631-like
2 2 2 1 SCOP 54975 Acylphosphatase/BLUF domain-like
2 2 2 1 SCOP 51391 Thiamin phosphate synthase
2 2 2 1 SCOP 48173 Cryptochrome/photolyase FAD-binding domain
2 2 2 1 SCOP 55826 YbaK/ProRS associated domain
2 2 1 1 SCOP 103025 Folate-binding domain
2 2 1 0 SCOP 159594 XCC0632-like
2 2 2 2 SCOP 48295 TrpR-like
2 2 2 0 SCOP 140931 Fic-like
2 2 1 1 SCOP 53323 Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
2 2 2 1 SCOP 143631 ApbE-like
2 2 1 2 SCOP 50814 Lipocalins
2 2 1 0 SCOP 53041 Resolvase-like
2 2 2 1 SCOP 50486 FMT C-terminal domain-like
2 2 1 1 SCOP 101874 YceI-like
2 2 1 1 SCOP 53163 HybD-like
2 2 1 1 SCOP 142764 YgbK-like
2 1 1 1 SCOP 89963 YajQ-like
2 2 2 0 SCOP 89155 TorD-like
2 2 2 1 SCOP 55846 N-acetylmuramoyl-L-alanine amidase-like
2 2 1 1 SCOP 69754 Ribosome binding protein Y (YfiA homologue)
2 2 2 0 SCOP 103515 Autotransporter
2 2 2 0 SCOP 82171 DPP6 N-terminal domain-like
2 2 2 1 SCOP 55186 ThrRS/AlaRS common domain
2 2 1 0 SCOP 49401 Bacterial adhesins
2 2 2 1 SCOP 52743 Subtilisin-like
2 2 1 1 SCOP 48024 N-terminal domain of DnaB helicase
2 2 1 0 SCOP 143865 CorA soluble domain-like
2 2 1 0 SCOP 143749 Phage tail protein-like
2 2 1 2 SCOP 51690 Nicotinate/Quinolinate PRTase C-terminal domain-like
2 2 2 1 SCOP 55103 FAD-linked oxidases, C-terminal domain
2 2 1 2 SCOP 144064 Heme iron utilization protein-like
2 2 2 0 SCOP 160544 EscU C-terminal domain-like
2 2 1 0 SCOP 55890 Sporulation response regulatory protein Spo0B
2 1 1 0 SCOP 49313 Cadherin-like
2 2 1 1 SCOP 52935 PK C-terminal domain-like
2 2 2 0 SCOP 82679 N-utilization substance G protein NusG, N-terminal domain
2 1 1 1 SCOP 48029 FliG
2 2 2 2 SCOP 56037 PheT/TilS domain
2 2 2 0 SCOP 47090 PGBD-like
2 2 1 1 SCOP 53671 Aspartate/ornithine carbamoyltransferase
2 2 2 1 SCOP 52964 TolB, N-terminal domain
2 2 2 1 SCOP 143968 UbiD C-terminal domain-like
2 2 2 1 SCOP 51120 beta-Roll
2 2 1 1 SCOP 46575 DNA polymerase III theta subunit-like
2 2 1 1 SCOP 101904 GyrA/ParC C-terminal domain-like
2 2 1 1 SCOP 143548 Serine metabolism enzymes domain
2 2 2 0 SCOP 52279 Beta-D-glucan exohydrolase, C-terminal domain
2 2 1 1 SCOP 100920 Heat shock protein 70kD (HSP70), peptide-binding domain
2 2 2 0 SCOP 46600 C-terminal UvrC-binding domain of UvrB
2 2 2 1 SCOP 49354 PapD-like
2 2 1 0 SCOP 144083 Magnesium transport protein CorA, transmembrane region
2 2 1 1 SCOP 160240 Cation efflux protein cytoplasmic domain-like
2 1 1 0 SCOP 158544 GspK insert domain-like
2 2 1 1 SCOP 63418 MurE/MurF N-terminal domain
2 2 1 1 SCOP 47823 lambda integrase-like, N-terminal domain
2 2 1 1 SCOP 54423 DsbC/DsbG N-terminal domain-like
2 2 2 1 SCOP 54768 dsRNA-binding domain-like
2 1 1 0 SCOP 47794 Rad51 N-terminal domain-like
2 2 2 1 SCOP 47831 Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
2 2 1 0 SCOP 75516 Pheromone-binding domain of LuxR-like quorum-sensing transcription factors
2 1 1 1 SCOP 56053 Ribosomal protein L6
2 2 1 0 SCOP 52413 UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
2 2 1 1 SCOP 81624 N-terminal domain of MutM-like DNA repair proteins
2 2 1 1 SCOP 100934 Heat shock protein 70kD (HSP70), C-terminal subdomain
2 2 1 1 SCOP 143975 IlvD/EDD N-terminal domain-like
2 2 1 1 SCOP 46557 GreA transcript cleavage protein, N-terminal domain
2 2 1 1 SCOP 54675 Nicotinate/Quinolinate PRTase N-terminal domain-like
2 2 1 1 SCOP 69189 Penicillin-binding protein associated domain
2 2 2 0 SCOP 47807 5' to 3' exonuclease, C-terminal subdomain
2 2 1 0 SCOP 50615 N-terminal domain of alpha and beta subunits of F1 ATP synthase
2 1 1 1 SCOP 49303 beta-Galactosidase/glucuronidase domain
2 2 2 1 SCOP 142019 Nqo1 FMN-binding domain-like
2 1 1 0 SCOP 49493 HSP40/DnaJ peptide-binding domain
2 1 1 1 SCOP 54713 Elongation factor Ts (EF-Ts), dimerisation domain
2 2 1 1 SCOP 75615 Siroheme synthase middle domains-like
2 2 1 1 SCOP 47917 C-terminal domain of alpha and beta subunits of F1 ATP synthase
2 2 1 1 SCOP 48168 R1 subunit of ribonucleotide reductase, N-terminal domain
2 2 2 0 SCOP 47005 Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
2 2 1 1 SCOP 101790 Aminomethyltransferase beta-barrel domain
2 2 1 0 SCOP 56519 Penicillin binding protein dimerisation domain
1 1 1 1 SCOP 81338 Aquaporin-like
1 1 1 1 SCOP 74982 Small protein B (SmpB)
1 1 1 1 SCOP 56808 Ribosomal protein L1
1 1 1 1 SCOP 53178 Peptidyl-tRNA hydrolase-like
1 1 1 1 SCOP 47973 Ribosomal protein S7
1 1 1 1 SCOP 46911 Ribosomal protein S18
1 1 1 1 SCOP 56420 Peptide deformylase
1 1 1 0 SCOP 81606 PP2C-like
1 1 1 1 SCOP 82607 YbaB-like
1 1 1 1 SCOP 89919 Ribosome-binding factor A, RbfA
1 1 1 1 SCOP 54999 Ribosomal protein S10
1 1 1 1 SCOP 52166 Ribosomal protein L4
1 1 1 1 SCOP 54189 Ribosomal proteins S24e, L23 and L15e
1 1 1 1 SCOP 54570 Ribosomal protein S19
1 1 1 1 SCOP 54843 Ribosomal protein L22
1 1 1 1 SCOP 54686 Ribosomal protein L16p/L10e
1 1 1 1 SCOP 50193 Ribosomal protein L14
1 1 1 1 SCOP 55282 RL5-like
1 1 1 1 SCOP 56047 Ribosomal protein S8
1 1 1 1 SCOP 52080 Ribosomal proteins L15p and L18e
1 1 1 0 SCOP 103491 Preprotein translocase SecY subunit
1 1 1 1 SCOP 64263 Prokaryotic ribosomal protein L17
1 1 1 1 SCOP 64182 DHH phosphoesterases
1 1 1 1 SCOP 143034 L35p-like
1 1 1 1 SCOP 74731 Ribosomal protein L20
1 1 1 1 SCOP 55831 Thymidylate synthase/dCMP hydroxymethylase
1 1 1 1 SCOP 141091 L21p-like
1 1 1 1 SCOP 110324 Ribosomal L27 protein-like
1 1 1 1 SCOP 53748 Phosphoglycerate kinase
1 1 1 1 SCOP 82549 DAK1/DegV-like
1 1 1 1 SCOP 75625 YebC-like
1 1 1 1 SCOP 50324 Inorganic pyrophosphatase
1 1 1 0 SCOP 160369 Ribosomal protein L10-like
1 1 1 1 SCOP 46992 Ribosomal protein S20
1 1 1 1 SCOP 52943 ATP synthase (F1-ATPase), gamma subunit
1 1 1 1 SCOP 81333 F1F0 ATP synthase subunit C
1 1 1 1 SCOP 55068 Peptide methionine sulfoxide reductase
1 1 1 1 SCOP 52161 Ribosomal protein L13
1 1 1 1 SCOP 47060 S15/NS1 RNA-binding domain
1 1 1 1 SCOP 55194 Ribosome recycling factor, RRF
1 1 1 1 SCOP 54565 Ribosomal protein S16
1 1 1 1 SCOP 51316 Mss4-like
1 1 1 1 SCOP 69765 IpsF-like
1 1 1 1 SCOP 54611 SecB-like
1 1 1 1 SCOP 103263 Chorismate synthase, AroC
1 1 1 1 SCOP 111337 QueA-like
1 1 1 1 SCOP 51713 tRNA-guanine transglycosylase
1 1 1 0 SCOP 56276 S-adenosylmethionine decarboxylase
1 1 1 1 SCOP 52313 Ribosomal protein S2
1 1 1 1 SCOP 64005 Undecaprenyl diphosphate synthase
1 1 1 1 SCOP 101322 YcfC-like
1 1 1 1 SCOP 142695 RibA-like
1 1 1 1 SCOP 102705 NIF3 (NGG1p interacting factor 3)-like
1 1 1 1 SCOP 55229 Cell division protein MinE topological specificity domain
1 1 1 0 SCOP 140566 FlgN-like
1 1 1 1 SCOP 52304 Type II 3-dehydroquinate dehydratase
1 1 1 1 SCOP 117130 CsrA-like
1 1 1 1 SCOP 54060 His-Me finger endonucleases
1 1 1 1 SCOP 64307 SirA-like
1 1 1 1 SCOP 52121 Lumazine synthase
1 1 1 0 SCOP 69721 DsrC, the gamma subunit of dissimilatory sulfite reductase
1 1 1 1 SCOP 81452 Cytochrome c oxidase subunit III-like
1 1 1 1 SCOP 117991 YbeD/HP0495-like
1 1 1 1 SCOP 55129 Ribosomal protein L30p/L7e
1 1 1 1 SCOP 46561 Ribosomal protein L29 (L29p)
1 1 1 1 SCOP 111148 YggX-like
1 1 1 1 SCOP 54995 Ribosomal protein S6
1 1 1 1 SCOP 55387 Frataxin/Nqo15-like
1 1 1 1 SCOP 56104 SAICAR synthase-like
1 1 1 1 SCOP 52949 Macro domain-like
1 1 1 1 SCOP 69500 DTD-like
1 1 1 0 SCOP 52799 (Phosphotyrosine protein) phosphatases II
1 1 1 1 SCOP 102886 Coproporphyrinogen III oxidase
1 1 1 0 SCOP 55144 LigT-like
1 1 1 0 SCOP 54897 Protease propeptides/inhibitors
1 1 1 0 SCOP 57997 Tropomyosin
1 1 1 0 SCOP 51645 Malate synthase G
1 1 1 1 SCOP 49329 Cu,Zn superoxide dismutase-like
1 1 1 1 SCOP 54919 Nucleoside diphosphate kinase, NDK
1 1 1 0 SCOP 49777 PEBP-like
1 1 1 1 SCOP 53056 beta-carbonic anhydrase, cab
1 1 1 1 SCOP 55257 RBP11-like subunits of RNA polymerase
1 1 1 0 SCOP 64153 YjeF N-terminal domain-like
1 1 1 1 SCOP 55159 eIF1-like
1 1 1 0 SCOP 69618 HemD-like
1 1 1 1 SCOP 55909 Pentein
1 1 1 0 SCOP 52788 Phosphotyrosine protein phosphatases I
1 1 1 0 SCOP 63562 RPB6/omega subunit-like
1 1 1 1 SCOP 81442 Cytochrome c oxidase subunit I-like
1 1 1 1 SCOP 53800 Chelatase
1 1 1 0 SCOP 141734 HisI-like
1 1 1 1 SCOP 144091 Rhomboid-like
1 1 1 0 SCOP 161084 MAPEG domain-like
1 1 1 0 SCOP 111038 YjbQ-like
1 1 1 1 SCOP 51069 Carbonic anhydrase
1 1 1 1 SCOP 55040 Molybdenum cofactor biosynthesis protein C, MoaC
1 1 1 1 SCOP 144020 FdhE-like
1 1 1 0 SCOP 143422 Transposase IS200-like
1 1 1 1 SCOP 53795 PEP carboxykinase-like
1 1 1 0 SCOP 103642 Sec-C motif
1 1 1 1 SCOP 64438 CNF1/YfiH-like putative cysteine hydrolases
1 1 1 1 SCOP 118196 YaeB-like
1 1 1 1 SCOP 52255 N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
1 1 1 1 SCOP 111352 Ammonium transporter
1 1 1 1 SCOP 142754 NadA-like
1 1 1 1 SCOP 56266 DmpA/ArgJ-like
1 1 1 1 SCOP 82697 PurS-like
1 1 1 1 SCOP 56524 Oxidoreductase molybdopterin-binding domain
1 1 1 0 SCOP 160246 EspE N-terminal domain-like
1 1 1 1 SCOP 55083 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
1 1 1 1 SCOP 101744 Rof/RNase P subunit-like
1 1 1 0 SCOP 53300 vWA-like
1 1 1 1 SCOP 89733 L-sulfolactate dehydrogenase-like
1 1 1 1 SCOP 117782 YbjQ-like
1 1 1 1 SCOP 63892 Pyridoxine 5'-phosphate synthase
1 1 1 1 SCOP 54690 Molybdopterin synthase subunit MoaE
1 1 1 0 SCOP 116842 XseB-like
1 1 1 1 SCOP 110399 ThiG-like
1 1 1 1 SCOP 111304 Recombination protein RecR
1 1 1 1 SCOP 117856 AF0104/ALDC/Ptd012-like
1 1 1 1 SCOP 103365 Hypothetical protein PH1602
1 1 1 0 SCOP 50993 Peptidase/esterase 'gauge' domain
1 1 1 0 SCOP 69065 RNase III domain-like
1 1 1 1 SCOP 55200 Translation initiation factor IF3, C-terminal domain
1 1 1 0 SCOP 50952 Soluble quinoprotein glucose dehydrogenase
1 1 1 0 SCOP 158997 Trm112p-like
1 1 1 1 SCOP 53213 LigB-like
1 1 1 1 SCOP 158442 DsbB-like
1 1 1 0 SCOP 102829 Cell division protein ZapA-like
1 1 1 1 SCOP 143456 VC0467-like
1 1 1 1 SCOP 52425 Cryptochrome/photolyase, N-terminal domain
1 1 1 0 SCOP 50998 Quinoprotein alcohol dehydrogenase-like
1 1 1 1 SCOP 102400 DNA polymerase III chi subunit
1 1 1 0 SCOP 81330 Gated mechanosensitive channel
1 1 1 0 SCOP 109910 YgfY-like
1 1 1 0 SCOP 101307 YutG-like
1 1 1 0 SCOP 56645 Acyl-CoA dehydrogenase NM domain-like
1 1 1 1 SCOP 110069 ApaG-like
1 1 1 1 SCOP 56821 Prismane protein-like
1 1 1 0 SCOP 57802 Rubredoxin-like
1 1 1 0 SCOP 50037 C-terminal domain of transcriptional repressors
1 1 1 0 SCOP 117457 FumA C-terminal domain-like
1 1 1 1 SCOP 111384 OmpH-like
1 1 1 0 SCOP 75138 HprK N-terminal domain-like
1 1 1 1 SCOP 56507 Methionine synthase activation domain-like
1 1 1 1 SCOP 53182 Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase)
1 1 1 0 SCOP 101116 Flagellar export chaperone FliS
1 1 1 1 SCOP 52242 Cobalamin (vitamin B12)-binding domain
1 1 1 1 SCOP 110738 Glycerate kinase I
1 1 1 1 SCOP 142338 CofD-like
1 1 1 1 SCOP 101327 YgfB-like
1 1 1 0 SCOP 101473 DhaL-like
1 1 1 1 SCOP 53062 PTS system fructose IIA component-like
1 1 1 0 SCOP 75011 3-carboxy-cis,cis-mucoante lactonizing enzyme
1 1 1 1 SCOP 160950 YacF-like
1 1 1 1 SCOP 101738 SspB-like
1 1 1 1 SCOP 69786 YggU-like
1 1 1 1 SCOP 140319 IscX-like
1 1 1 1 SCOP 159127 HupF/HypC-like
1 1 1 0 SCOP 159203 NifT/FixU-like
1 1 1 1 SCOP 159709 PhnH-like
1 1 1 1 SCOP 75471 YhbY-like
1 1 1 1 SCOP 103501 Respiratory nitrate reductase 1 gamma chain
1 1 1 1 SCOP 74863 Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha)
1 1 1 0 SCOP 50939 Sialidases
1 1 1 0 SCOP 101498 Anti-sigma factor FlgM
1 1 1 0 SCOP 103039 CheC-like
1 1 1 1 SCOP 110395 CutC-like
1 1 1 0 SCOP 141371 PilZ domain-like
1 1 1 0 SCOP 49452 Starch-binding domain-like
1 1 1 0 SCOP 160904 Jann2411-like
1 1 1 1 SCOP 55136 Probable bacterial effector-binding domain
1 1 1 0 SCOP 47175 Cytochromes
1 1 1 1 SCOP 52738 Methylesterase CheB, C-terminal domain
1 1 1 1 SCOP 158710 PSPTO4464-like
1 1 1 1 SCOP 89562 RraA-like
1 1 1 0 SCOP 101082 Typo IV secretion system protein TraC
1 1 1 1 SCOP 63592 Flagellar transcriptional activator FlhD
1 1 1 1 SCOP 160930 FlhC-like
1 1 1 1 SCOP 75708 Chemotaxis phosphatase CheZ
1 1 1 0 SCOP 158791 MgtE N-terminal domain-like
1 1 1 0 SCOP 102198 Putative cyclase
1 1 1 1 SCOP 63992 Dipeptide transport protein
1 1 1 0 SCOP 160631 SMI1/KNR4-like
1 1 1 1 SCOP 102546 RbsD-like
1 1 1 0 SCOP 50346 PRC-barrel domain
1 1 1 0 SCOP 143437 THUMP domain-like
1 1 1 1 SCOP 52490 Tubulin nucleotide-binding domain-like
1 1 1 1 SCOP 89946 Hypothetical protein VC0424
1 1 1 1 SCOP 160191 YcgL-like
1 1 1 1 SCOP 63867 MoeA C-terminal domain-like
1 1 1 1 SCOP 101756 Hypothetical protein YgiW
1 1 1 1 SCOP 111364 Tsx-like channel
1 1 1 1 SCOP 53092 Creatinase/prolidase N-terminal domain
1 1 1 0 SCOP 47203 Acyl-CoA dehydrogenase C-terminal domain-like
1 1 1 1 SCOP 69864 Argininosuccinate synthetase, C-terminal domain
1 1 1 1 SCOP 158832 Tex N-terminal region-like
1 1 1 1 SCOP 48592 GroEL equatorial domain-like
1 1 1 1 SCOP 69336 Alpha subunit of glutamate synthase, C-terminal domain
1 1 1 1 SCOP 158651 YejL-like
1 1 1 1 SCOP 158452 YqcC-like
1 1 1 1 SCOP 102816 Putative dsDNA mimic
1 1 1 1 SCOP 158668 MtlR-like
1 1 1 0 SCOP 118001 YehU-like
1 1 1 1 SCOP 102220 DNA polymerase III psi subunit
1 1 1 0 SCOP 141318 TM0957-like
1 1 1 1 SCOP 54857 DNA damage-inducible protein DinI
1 1 1 1 SCOP 116960 YfbU-like
1 1 1 1 SCOP 82093 Heme chaperone CcmE
1 1 1 1 SCOP 57938 DnaJ/Hsp40 cysteine-rich domain
1 1 1 0 SCOP 50370 Ricin B-like lectins
1 1 1 0 SCOP 160272 Shew3726-like
1 1 1 1 SCOP 52728 PTS IIb component
1 1 1 0 SCOP 141488 YdhA-like
1 1 1 1 SCOP 56596 Replication terminator protein (Tus)
1 1 1 1 SCOP 159270 YmcC-like
1 1 1 1 SCOP 68989 Hemolysin expression modulating protein HHA
1 1 1 0 SCOP 58042 Outer membrane lipoprotein
1 1 1 0 SCOP 82114 Riboflavin kinase-like
1 1 1 1 SCOP 46906 Ribosomal protein L11, C-terminal domain
1 1 1 0 SCOP 160443 SMR domain-like
1 1 1 1 SCOP 160991 CV3147-like
1 1 1 0 SCOP 69304 Tricorn protease N-terminal domain
1 1 1 1 SCOP 82057 Prokaryotic SH3-related domain
1 1 1 0 SCOP 141099 Atu1913-like
1 1 1 1 SCOP 141255 YccV-like
1 1 1 1 SCOP 102645 CoaB-like
1 1 1 0 SCOP 48230 Chondroitin AC/alginate lyase
1 1 1 1 SCOP 118352 HSP33 redox switch-like
1 1 1 1 SCOP 56931 Outer membrane phospholipase A (OMPLA)
1 1 1 1 SCOP 54821 Ribosomal protein S3 C-terminal domain
1 1 1 1 SCOP 81573 F1F0 ATP synthase subunit B, membrane domain
1 1 1 0 SCOP 63848 Cell-division inhibitor MinC, C-terminal domain
1 1 1 1 SCOP 160355 Bacterial polysaccharide co-polymerase-like
1 1 1 1 SCOP 109635 DnaK suppressor protein DksA, alpha-hairpin domain
1 1 1 1 SCOP 81935 N-terminal domain of bifunctional PutA protein
1 1 1 1 SCOP 118116 DNA mismatch repair protein MutL
1 1 1 1 SCOP 81336 F1F0 ATP synthase subunit A
1 1 1 0 SCOP 49384 Carbohydrate-binding domain
1 1 1 1 SCOP 47789 C-terminal domain of RNA polymerase alpha subunit
1 1 1 1 SCOP 51344 Epsilon subunit of F1F0-ATP synthase N-terminal domain
1 1 1 0 SCOP 48657 FinO-like
1 1 1 1 SCOP 55658 L9 N-domain-like
1 1 1 0 SCOP 49265 Fibronectin type III
1 1 1 1 SCOP 68923 PEP carboxykinase N-terminal domain
1 1 1 0 SCOP 55190 Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
1 1 1 1 SCOP 69055 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
1 1 1 1 SCOP 48334 DNA repair protein MutS, domain III
1 1 1 1 SCOP 58014 Coiled-coil domain of nucleotide exchange factor GrpE
1 1 1 1 SCOP 81464 Cytochrome c oxidase subunit II-like, transmembrane region
1 1 1 1 SCOP 161093 MgtE membrane domain-like
1 1 1 1 SCOP 55307 Tubulin C-terminal domain-like
1 1 1 1 SCOP 140990 FtsH protease domain-like
1 1 1 0 SCOP 141673 MOSC N-terminal domain-like
1 1 1 1 SCOP 57884 Ada DNA repair protein, N-terminal domain (N-Ada 10)
1 1 1 0 SCOP 142984 Nqo1 middle domain-like
1 1 1 1 SCOP 54719 Fe,Mn superoxide dismutase (SOD), C-terminal domain
1 1 1 0 SCOP 143469 ImmE5-like
1 1 1 0 SCOP 48163 An anticodon-binding domain of class I aminoacyl-tRNA synthetases
1 1 1 1 SCOP 102824 Colicin D/E5 nuclease domain
1 1 1 0 SCOP 49584 Periplasmic chaperone C-domain
1 1 1 1 SCOP 52021 Carbamoyl phosphate synthetase, small subunit N-terminal domain
1 1 1 0 SCOP 54791 Eukaryotic type KH-domain (KH-domain type I)
1 1 1 0 SCOP 117074 Hypothetical protein PA1324
1 1 1 1 SCOP 52029 GroEL apical domain-like
1 1 1 0 SCOP 103063 Hypothetical protein YoaG
1 1 1 0 SCOP 141729 FimD N-terminal domain-like
1 1 1 1 SCOP 143737 YeeU-like
1 1 1 0 SCOP 160472 NMB0513-like
1 1 1 0 SCOP 68912 Rho N-terminal domain-like
1 1 1 1 SCOP 54810 GMP synthetase C-terminal dimerisation domain
1 1 1 0 SCOP 57825 Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain
1 1 1 0 SCOP 57863 ArfGap/RecO-like zinc finger
1 1 1 0 SCOP 81660 Metal cation-transporting ATPase, ATP-binding domain N
1 1 1 1 SCOP 47364 Domain of the SRP/SRP receptor G-proteins
1 1 1 0 SCOP 48300 Ribosomal protein L7/12, oligomerisation (N-terminal) domain
1 1 1 0 SCOP 63737 Leukotriene A4 hydrolase N-terminal domain
1 1 1 0 SCOP 141322 NfeD domain-like
1 1 1 1 SCOP 50882 beta-Barrel protease inhibitors
1 1 1 1 SCOP 55252 C-terminal domain of arginine repressor
1 1 1 1 SCOP 90002 Hypothetical protein YjiA, C-terminal domain
1 1 1 1 SCOP 47144 HSC20 (HSCB), C-terminal oligomerisation domain
1 1 1 1 SCOP 54621 Heme-binding protein A (HasA)
1 1 1 0 SCOP 46934 UBA-like
1 1 1 0 SCOP 46604 Epsilon subunit of F1F0-ATP synthase C-terminal domain
1 1 1 0 SCOP 110921 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
1 1 1 1 SCOP 100879 Lesion bypass DNA polymerase (Y-family), little finger domain
1 1 1 0 SCOP 69075 Glutamyl tRNA-reductase dimerization domain
1 1 1 1 SCOP 63882 MoeA N-terminal region -like
1 1 1 0 SCOP 52113 BRCT domain
1 1 1 1 SCOP 141259 CarD-like
1 1 1 0 SCOP 74942 YhbC-like, C-terminal domain
1 1 1 0 SCOP 89069 N-terminal, cytoplasmic domain of anti-sigmaE factor RseA
1 1 1 1 SCOP 48435 Bacterial muramidases
1 1 1 0 SCOP 75420 YhbC-like, N-terminal domain
1 1 1 0 SCOP 54752 RecA protein, C-terminal domain
1 1 1 1 SCOP 82808 Replication modulator SeqA, C-terminal DNA-binding domain
1 1 1 1 SCOP 54782 Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
1 1 1 0 SCOP 140591 Type III secretion system domain
1 1 1 0 SCOP 69369 Cloacin translocation domain
1 1 1 0 SCOP 140490 Nqo1C-terminal domain-like
1 1 1 1 SCOP 102735 Trigger factor ribosome-binding domain
1 1 1 1 SCOP 53743 FucI/AraA N-terminal and middle domains
1 1 1 1 SCOP 54680 Pyrimidine nucleoside phosphorylase C-terminal domain
1 1 1 1 SCOP 50443 FucI/AraA C-terminal domain-like
1 1 1 1 SCOP 55904 Ornithine decarboxylase C-terminal domain
1 1 1 1 SCOP 47446 Signal peptide-binding domain
1 1 1 1 SCOP 64397 Hsp33 domain
1 1 1 0 SCOP 54991 Anticodon-binding domain of PheRS
1 1 1 1 SCOP 55271 DNA repair protein MutS, domain I
1 1 1 1 SCOP 47928 N-terminal domain of the delta subunit of the F1F0-ATP synthase
1 1 1 1 SCOP 48108 Carbamoyl phosphate synthetase, large subunit connection domain
1 1 1 0 SCOP 101690 PAZ domain
1 1 1 1 SCOP 82051 Obg GTP-binding protein N-terminal domain
1 1 1 1 SCOP 143724 PHP14-like
1 1 1 1 SCOP 54368 Glutamine synthetase, N-terminal domain
1 1 1 1 SCOP 55261 GAD domain-like
1 1 1 1 SCOP 47757 Chemotaxis receptor methyltransferase CheR, N-terminal domain
1 1 1 1 SCOP 110942 HSP90 C-terminal domain
1 1 1 0 SCOP 49590 PHL pollen allergen
1 1 1 1 SCOP 54747 Ribosomal L11/L12e N-terminal domain
1 1 1 1 SCOP 46609 Fe,Mn superoxide dismutase (SOD), N-terminal domain
1 1 1 0 SCOP 69742 Glutamyl tRNA-reductase catalytic, N-terminal domain
1 1 1 1 SCOP 81886 Helical scaffold and wing domains of SecA
1 1 1 1 SCOP 54849 GroEL-intermediate domain like
1 1 1 1 SCOP 56194 Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
1 1 1 0 SCOP 89000 post-HMGL domain-like
1 1 1 0 SCOP 52156 Initiation factor IF2/eIF5b, domain 3
1 1 1 0 SCOP 116878 TrmE connector domain
1 1 1 0 SCOP 51064 Head domain of nucleotide exchange factor GrpE
1 1 1 1 SCOP 55653 Ribosomal protein L9 C-domain
1 1 1 1 SCOP 75445 D-ribose-5-phosphate isomerase (RpiA), lid domain
1 1 1 0 SCOP 103054 General secretion pathway protein M, EpsM
1 1 1 1 SCOP 143517 TRCF domain-like
1 1 1 1 SCOP 101353 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
1 1 1 1 SCOP 56553 Insert subdomain of RNA polymerase alpha subunit
1 1 1 1 SCOP 74778 Aconitase B, N-terminal domain
1 1 1 1 SCOP 64383 Cell-division protein ZipA, C-terminal domain
1 1 1 1 SCOP 117023 DNA primase DnaG, C-terminal domain
1 1 1 1 SCOP 47644 Methionine synthase domain
1 1 1 0 SCOP 46929 DNA helicase RuvA subunit, C-terminal domain
1 1 1 1 SCOP 54893 Aspartate carbamoyltransferase, Regulatory-chain, N-terminal domain
1 1 1 0 SCOP 54364 Translation initiation factor IF3, N-terminal domain
1 1 1 0 SCOP 69705 Transcription factor NusA, N-terminal domain
1 1 1 1 SCOP 53150 DNA repair protein MutS, domain II
1 1 1 1 SCOP 81767 Pre-protein crosslinking domain of SecA
1 1 1 1 SCOP 140356 PPK N-terminal domain-like
1 1 1 0 SCOP 81799 Putative methyltransferase TM0872, insert domain
1 1 1 0 SCOP 82829 MesJ substrate recognition domain-like
1 1 1 0 SCOP 55052 CheY-binding domain of CheA
1 1 1 0 SCOP 46915 Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
1 1 1 0 SCOP 103661 Proline/betaine transporter ProP, C-terminal cytoplasmic domain
1 1 1 1 SCOP 143856 DeoB insert domain-like
1 1 1 1 SCOP 109736 FGAM synthase PurL, linker domain
1 1 1 1 SCOP 160996 HI0933 insert domain-like
1 1 1 1 SCOP 140570 MukF C-terminal domain-like
1 1 1 0 SCOP 57770 Methionyl-tRNA synthetase (MetRS), Zn-domain

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The following superfamilies have one or more weak hits:

SCOP superfamily Myosin rod fragments
SCOP superfamily Ran binding protein zinc finger-like
SCOP superfamily CoA-transferase family III (CaiB/BaiF)
SCOP superfamily Collagen-binding domain
SCOP superfamily GAT-like domain
SCOP superfamily Families 57/38 glycoside transferase middle domain
SCOP superfamily Positive stranded ssRNA viruses
SCOP superfamily Tumor suppressor gene product Apc
SCOP superfamily L-A virus major coat protein
SCOP superfamily R3H domain
SCOP superfamily a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
SCOP superfamily F-box domain
SCOP superfamily Clc chloride channel
SCOP superfamily Family A G protein-coupled receptor-like
SCOP superfamily Mitotic arrest deficient-like 1, Mad1
SCOP superfamily Zinc-binding domain of translation initiation factor 2 beta
SCOP superfamily Smc hinge domain
SCOP superfamily VSV matrix protein
SCOP superfamily Cullin repeat-like
SCOP superfamily Colicin E3 receptor domain
SCOP superfamily Tricorn protease domain 2
SCOP superfamily Integrin alpha N-terminal domain
SCOP superfamily Ribonuclease domain of colicin E3
SCOP superfamily BAG domain
SCOP superfamily RNA polymerase subunits
SCOP superfamily Apolipoprotein A-I
SCOP superfamily Bacterial hemolysins
SCOP superfamily XRCC4, C-terminal oligomerization domain
SCOP superfamily Fibrinogen coiled-coil and central regions
SCOP superfamily Leucine zipper domain
SCOP superfamily FYVE/PHD zinc finger
SCOP superfamily Microbial and mitochondrial ADK, insert "zinc finger" domain
SCOP superfamily Bcl-2 inhibitors of programmed cell death
SCOP superfamily Heme-dependent catalase-like
SCOP superfamily Substrate-binding domain of HMG-CoA reductase
SCOP superfamily Cystatin/monellin
SCOP superfamily Avidin/streptavidin
SCOP superfamily Cna protein B-type domain
SCOP superfamily Carboxypeptidase regulatory domain-like
SCOP superfamily Actinoxanthin-like
SCOP superfamily Phospholipase A2, PLA2
SCOP superfamily Aldehyde ferredoxin oxidoreductase, C-terminal domains
SCOP superfamily t-snare proteins
SCOP superfamily HLH, helix-loop-helix DNA-binding domain
SCOP superfamily Apolipoprotein
SCOP superfamily VHP, Villin headpiece domain
SCOP superfamily Spectrin repeat
SCOP superfamily Eukaryotic DNA topoisomerase I, dispensable insert domain
SCOP superfamily Prefoldin
SCOP superfamily CHY zinc finger-like
SCOP superfamily ATP synthase B chain-like
SCOP superfamily V-type ATPase subunit E-like
SCOP superfamily Lipase chaperone-like
SCOP superfamily Sec63 N-terminal domain-like
SCOP superfamily TAFH domain-like
SCOP superfamily TM1646-like
SCOP superfamily YvfG-like
SCOP superfamily NOB1 zinc finger-like
SCOP superfamily YkuJ-like
SCOP superfamily Glu-tRNAGln amidotransferase C subunit
SCOP superfamily SipA N-terminal domain-like
SCOP superfamily PA2201 C-terminal domain-like
SCOP superfamily WWE domain
SCOP superfamily Hypothetical protein MG354
SCOP superfamily VPS9 domain
SCOP superfamily Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain
SCOP superfamily NSFL1 (p97 ATPase) cofactor p47, SEP domain
SCOP superfamily Adhesin YadA, collagen-binding domain
SCOP superfamily NHL repeat
SCOP superfamily Stathmin
SCOP superfamily Oxygen-evolving enhancer protein 3,

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