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Sphaerochaeta coccoides DSM 17374 superfamily assignments

Taxonomy
Taxonomy browser entry

Bacteria; Spirochaetes; Spirochaetia; Spirochaetales; Spirochaetaceae; Sphaerochaeta; Sphaerochaeta coccoides; Sphaerochaeta coccoides DSM 17374

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Fasta format sequences
Domain assignments


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Assignment statistics

Sequences: 1822 total
1362 (75 %) with assignment
363 average length
65 % amino acid coverage
Domains: 2019 total
526 unique superfamilies
332 unique families
318 average length
3.8 average superfamily size
74 % formed by duplication
Domain combinations: 333 domain pairs
708 unique architectures

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Superfamily assignments

Domains

Proteins

Architectures

Families

SCOP link

Superfamilies

193 162 55 8 SCOP 52540 P-loop containing nucleoside triphosphate hydrolases
64 61 5 1 SCOP 161098 MetI-like
58 39 5 0 SCOP 50985 RCC1/BLIP-II
54 53 18 7 SCOP 51735 NAD(P)-binding Rossmann-fold domains
45 44 22 0 SCOP 46785 "Winged helix" DNA-binding domain
43 43 6 1 SCOP 53850 Periplasmic binding protein-like II
41 27 12 0 SCOP 46689 Homeodomain-like
38 37 7 1 SCOP 53822 Periplasmic binding protein-like I
32 20 8 3 SCOP 53067 Actin-like ATPase domain
26 20 16 1 SCOP 50249 Nucleic acid-binding proteins
23 21 11 2 SCOP 53335 S-adenosyl-L-methionine-dependent methyltransferases
22 20 15 6 SCOP 54211 Ribosomal protein S5 domain 2-like
22 22 14 7 SCOP 51445 (Trans)glycosidases
21 21 2 4 SCOP 53383 PLP-dependent transferases
18 18 4 0 SCOP 102114 Radical SAM enzymes
18 18 5 0 SCOP 47413 lambda repressor-like DNA-binding domains
17 17 11 2 SCOP 52374 Nucleotidylyl transferase
16 16 5 4 SCOP 56784 HAD-like
15 15 2 0 SCOP 103473 MFS general substrate transporter
15 15 10 2 SCOP 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
14 14 6 2 SCOP 53098 Ribonuclease H-like
14 14 12 2 SCOP 55681 Class II aaRS and biotin synthetases
14 14 5 1 SCOP 52172 CheY-like
13 13 4 3 SCOP 55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
12 7 6 7 SCOP 52518 Thiamin diphosphate-binding fold (THDP-binding)
11 11 6 3 SCOP 51569 Aldolase
11 11 3 0 SCOP 52218 Flavoproteins
11 9 9 0 SCOP 55021 ACT-like
11 6 4 1 SCOP 54980 EF-G C-terminal domain-like
10 10 5 5 SCOP 51556 Metallo-dependent hydrolases
10 10 8 3 SCOP 52317 Class I glutamine amidotransferase-like
10 9 5 1 SCOP 53271 PRTase-like
10 10 9 2 SCOP 52402 Adenine nucleotide alpha hydrolases-like
10 9 7 2 SCOP 50447 Translation proteins
10 4 4 0 SCOP 53738 Phosphoglucomutase, first 3 domains
9 7 4 0 SCOP 48452 TPR-like
9 9 3 2 SCOP 56281 Metallo-hydrolase/oxidoreductase
9 9 2 0 SCOP 46894 C-terminal effector domain of the bipartite response regulators
9 9 1 1 SCOP 90123 ABC transporter transmembrane region
9 8 6 1 SCOP 47323 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
8 7 6 2 SCOP 56059 Glutathione synthetase ATP-binding domain-like
8 8 2 1 SCOP 53474 alpha/beta-Hydrolases
8 8 5 1 SCOP 51905 FAD/NAD(P)-binding domain
8 8 1 3 SCOP 51658 Xylose isomerase-like
8 7 3 3 SCOP 100950 NagB/RpiA/CoA transferase-like
8 8 5 1 SCOP 53187 Zn-dependent exopeptidases
8 8 4 1 SCOP 109604 HD-domain/PDEase-like
8 6 4 0 SCOP 55729 Acyl-CoA N-acyltransferases (Nat)
8 8 7 1 SCOP 54534 FKBP-like
8 8 4 3 SCOP 48208 Six-hairpin glycosidases
8 8 4 0 SCOP 140931 Fic-like
7 7 2 1 SCOP 53613 Ribokinase-like
7 6 2 1 SCOP 56300 Metallo-dependent phosphatases
7 7 3 2 SCOP 75217 alpha/beta knot
7 5 2 0 SCOP 54637 Thioesterase/thiol ester dehydrase-isomerase
7 7 3 3 SCOP 51182 RmlC-like cupins
7 7 5 2 SCOP 81301 Nucleotidyltransferase
7 7 1 1 SCOP 48179 6-phosphogluconate dehydrogenase C-terminal domain-like
7 4 3 0 SCOP 51971 Nucleotide-binding domain
7 4 4 0 SCOP 49303 beta-Galactosidase/glucuronidase domain
6 6 1 1 SCOP 52833 Thioredoxin-like
6 6 3 3 SCOP 55120 Pseudouridine synthase
6 6 3 1 SCOP 51395 FMN-linked oxidoreductases
6 6 6 1 SCOP 74650 Galactose mutarotase-like
6 6 4 4 SCOP 51998 PFL-like glycyl radical enzymes
6 6 2 2 SCOP 53223 Aminoacid dehydrogenase-like, N-terminal domain
6 5 4 1 SCOP 52440 PreATP-grasp domain
6 6 1 0 SCOP 160964 MalF N-terminal region-like
5 5 4 1 SCOP 50104 Translation proteins SH3-like domain
5 5 2 0 SCOP 69593 Glycerol-3-phosphate (1)-acyltransferase
5 5 4 2 SCOP 53633 Carbamate kinase-like
5 5 3 1 SCOP 48150 DNA-glycosylase
5 5 4 2 SCOP 51621 Phosphoenolpyruvate/pyruvate domain
5 5 2 3 SCOP 52096 ClpP/crotonase
5 5 3 2 SCOP 56796 Dehydroquinate synthase-like
5 5 2 1 SCOP 56801 Acetyl-CoA synthetase-like
5 5 1 1 SCOP 55469 FMN-dependent nitroreductase-like
5 5 2 2 SCOP 53649 Alkaline phosphatase-like
5 5 5 1 SCOP 49785 Galactose-binding domain-like
5 5 4 1 SCOP 88713 Glycoside hydrolase/deacetylase
5 4 4 1 SCOP 51230 Single hybrid motif
5 5 4 4 SCOP 52467 DHS-like NAD/FAD-binding domain
5 3 3 0 SCOP 88659 Sigma3 and sigma4 domains of RNA polymerase sigma factors
5 2 2 1 SCOP 63411 LuxS/MPP-like metallohydrolase
5 4 4 0 SCOP 54814 Prokaryotic type KH domain (KH-domain type II)
5 5 1 0 SCOP 50331 MOP-like
5 5 4 0 SCOP 46548 alpha-helical ferredoxin
5 5 3 0 SCOP 53244 MurD-like peptide ligases, peptide-binding domain
5 5 4 0 SCOP 56176 FAD-binding/transporter-associated domain-like
5 5 3 0 SCOP 47384 Homodimeric domain of signal transducing histidine kinase
5 5 3 0 SCOP 158472 HAMP domain-like
5 5 2 0 SCOP 51215 Regulatory protein AraC
5 5 3 1 SCOP 53623 MurD-like peptide ligases, catalytic domain
5 5 3 1 SCOP 50677 ValRS/IleRS/LeuRS editing domain
5 5 2 0 SCOP 55031 Bacterial exopeptidase dimerisation domain
4 4 2 1 SCOP 53448 Nucleotide-diphospho-sugar transferases
4 4 1 1 SCOP 53167 Purine and uridine phosphorylases
4 4 3 1 SCOP 53927 Cytidine deaminase-like
4 4 2 2 SCOP 51366 Ribulose-phoshate binding barrel
4 4 4 2 SCOP 47240 Ferritin-like
4 4 3 1 SCOP 55486 Metalloproteases ("zincins"), catalytic domain
4 4 2 1 SCOP 53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes
4 4 2 2 SCOP 53720 ALDH-like
4 4 4 0 SCOP 54862 4Fe-4S ferredoxins
4 4 2 3 SCOP 53756 UDP-Glycosyltransferase/glycogen phosphorylase
4 4 4 2 SCOP 56235 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
4 4 1 1 SCOP 50475 FMN-binding split barrel
4 4 2 1 SCOP 51430 NAD(P)-linked oxidoreductase
4 3 2 1 SCOP 51726 UROD/MetE-like
4 4 3 1 SCOP 52151 FabD/lysophospholipase-like
4 4 3 0 SCOP 52954 Class II aaRS ABD-related
4 4 3 0 SCOP 54631 CBS-domain pair
4 4 3 0 SCOP 46955 Putative DNA-binding domain
4 4 2 1 SCOP 56349 DNA breaking-rejoining enzymes
4 4 4 0 SCOP 89550 PHP domain-like
4 2 2 0 SCOP 56024 Phospholipase D/nuclease
4 4 4 0 SCOP 47781 RuvA domain 2-like
4 4 4 1 SCOP 55186 ThrRS/AlaRS common domain
4 4 4 1 SCOP 52777 CoA-dependent acyltransferases
4 4 1 0 SCOP 48008 GntR ligand-binding domain-like
4 4 2 0 SCOP 46589 tRNA-binding arm
4 3 3 0 SCOP 50156 PDZ domain-like
4 4 3 1 SCOP 56719 Type II DNA topoisomerase
4 4 4 1 SCOP 52922 TK C-terminal domain-like
4 4 2 1 SCOP 81665 Calcium ATPase, transmembrane domain M
4 3 2 0 SCOP 117892 Band 7/SPFH domain
4 4 2 0 SCOP 81653 Calcium ATPase, transduction domain A
3 3 2 1 SCOP 53697 SIS domain
3 3 3 0 SCOP 57716 Glucocorticoid receptor-like (DNA-binding domain)
3 3 3 1 SCOP 55920 Creatinase/aminopeptidase
3 2 2 1 SCOP 64182 DHH phosphoesterases
3 3 3 1 SCOP 55174 Alpha-L RNA-binding motif
3 3 3 0 SCOP 52980 Restriction endonuclease-like
3 3 3 1 SCOP 50129 GroES-like
3 3 3 0 SCOP 51161 Trimeric LpxA-like enzymes
3 3 2 0 SCOP 55811 Nudix
3 3 1 1 SCOP 81345 ABC transporter involved in vitamin B12 uptake, BtuC
3 3 3 0 SCOP 51419 PLP-binding barrel
3 3 3 0 SCOP 51306 LexA/Signal peptidase
3 3 2 1 SCOP 53639 AraD/HMP-PK domain-like
3 3 3 2 SCOP 55781 GAF domain-like
3 3 2 0 SCOP 55008 HMA, heavy metal-associated domain
3 3 1 0 SCOP 52283 Formate/glycerate dehydrogenase catalytic domain-like
3 3 3 1 SCOP 102405 MCP/YpsA-like
3 3 3 1 SCOP 88946 Sigma2 domain of RNA polymerase sigma factors
3 2 2 0 SCOP 54913 GlnB-like
3 3 1 1 SCOP 144052 Thermophilic metalloprotease-like
3 3 3 0 SCOP 88697 PUA domain-like
3 2 2 0 SCOP 101386 all-alpha NTP pyrophosphatases
3 3 2 0 SCOP 50037 C-terminal domain of transcriptional repressors
3 3 2 0 SCOP 56925 OMPA-like
3 2 2 1 SCOP 75005 Arabinanase/levansucrase/invertase
3 2 2 0 SCOP 53092 Creatinase/prolidase N-terminal domain
3 1 1 0 SCOP 55979 DNA clamp
3 3 2 0 SCOP 51246 Rudiment single hybrid motif
3 3 1 0 SCOP 48230 Chondroitin AC/alginate lyase
3 3 3 1 SCOP 48019 post-AAA+ oligomerization domain-like
3 3 2 0 SCOP 52009 Phosphohistidine domain
3 1 1 1 SCOP 55973 S-adenosylmethionine synthetase
3 2 2 0 SCOP 116726 TrkA C-terminal domain-like
3 3 2 0 SCOP 51011 Glycosyl hydrolase domain
3 2 2 1 SCOP 56042 PurM C-terminal domain-like
3 2 2 1 SCOP 55326 PurM N-terminal domain-like
3 3 2 0 SCOP 101852 Bacterial fluorinating enzyme, C-terminal domain
2 2 1 0 SCOP 55594 HPr-like
2 2 1 0 SCOP 57829 Zn-binding ribosomal proteins
2 2 1 1 SCOP 53178 Peptidyl-tRNA hydrolase-like
2 2 2 2 SCOP 52141 Uracil-DNA glycosylase-like
2 2 1 0 SCOP 111331 NAD kinase/diacylglycerol kinase-like
2 2 1 1 SCOP 53137 Translational machinery components
2 2 1 1 SCOP 53784 Phosphofructokinase
2 2 1 0 SCOP 89447 AbrB/MazE/MraZ-like
2 2 1 0 SCOP 143800 L28p-like
2 2 1 1 SCOP 75620 Release factor
2 2 1 0 SCOP 51695 PLC-like phosphodiesterases
2 2 1 2 SCOP 53659 Isocitrate/Isopropylmalate dehydrogenase-like
2 2 1 1 SCOP 53748 Phosphoglycerate kinase
2 2 2 1 SCOP 82649 SufE/NifU
2 2 2 0 SCOP 109998 Triger factor/SurA peptide-binding domain-like
2 2 2 1 SCOP 89623 Ribose/Galactose isomerase RpiB/AlsB
2 2 2 2 SCOP 64484 beta and beta-prime subunits of DNA dependent RNA-polymerase
2 2 1 1 SCOP 48557 L-aspartase-like
2 2 2 1 SCOP 50715 Ribosomal protein L25-like
2 2 1 1 SCOP 102705 NIF3 (NGG1p interacting factor 3)-like
2 2 1 1 SCOP 53254 Phosphoglycerate mutase-like
2 2 1 1 SCOP 55205 EPT/RTPC-like
2 2 1 1 SCOP 55298 YjgF-like
2 2 2 0 SCOP 48371 ARM repeat
2 2 2 2 SCOP 56672 DNA/RNA polymerases
2 2 2 1 SCOP 50891 Cyclophilin-like
2 2 2 1 SCOP 53328 Formyltransferase
2 2 1 1 SCOP 56752 D-aminoacid aminotransferase-like PLP-dependent enzymes
2 2 2 0 SCOP 56317 Carbon-nitrogen hydrolase
2 2 2 2 SCOP 49899 Concanavalin A-like lectins/glucanases
2 2 1 2 SCOP 52972 ITPase-like
2 2 1 1 SCOP 51126 Pectin lyase-like
2 2 1 0 SCOP 110849 ParB/Sulfiredoxin
2 2 1 0 SCOP 52266 SGNH hydrolase
2 2 1 0 SCOP 101960 Stabilizer of iron transporter SufD
2 2 2 2 SCOP 53795 PEP carboxykinase-like
2 2 1 0 SCOP 54593 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
2 2 2 0 SCOP 54909 Dimeric alpha+beta barrel
2 2 1 0 SCOP 143011 RelE-like
2 2 2 1 SCOP 52016 LeuD/IlvD-like
2 2 1 2 SCOP 53807 "Helical backbone" metal receptor
2 2 2 0 SCOP 51206 cAMP-binding domain-like
2 2 2 1 SCOP 56219 DNase I-like
2 1 1 0 SCOP 103481 Multidrug resistance efflux transporter EmrE
2 2 2 0 SCOP 55826 YbaK/ProRS associated domain
2 2 2 0 SCOP 51338 Composite domain of metallo-dependent hydrolases
2 2 2 1 SCOP 103025 Folate-binding domain
2 2 2 1 SCOP 52335 Methylglyoxal synthase-like
2 2 1 0 SCOP 55804 Phoshotransferase/anion transport protein
2 2 2 0 SCOP 48295 TrpR-like
2 2 2 0 SCOP 57802 Rubredoxin-like
2 2 2 0 SCOP 55785 PYP-like sensor domain (PAS domain)
2 2 1 0 SCOP 64288 Chorismate lyase-like
2 2 1 0 SCOP 53041 Resolvase-like
2 2 2 1 SCOP 50486 FMT C-terminal domain-like
2 1 1 1 SCOP 53901 Thiolase-like
2 2 2 1 SCOP 46565 Chaperone J-domain
2 2 2 1 SCOP 52490 Tubulin nucleotide-binding domain-like
2 2 2 0 SCOP 52343 Ferredoxin reductase-like, C-terminal NADP-linked domain
2 2 1 1 SCOP 56712 Prokaryotic type I DNA topoisomerase
2 2 2 0 SCOP 160443 SMR domain-like
2 2 2 1 SCOP 48334 DNA repair protein MutS, domain III
2 2 2 1 SCOP 53671 Aspartate/ornithine carbamoyltransferase
2 2 1 0 SCOP 48163 An anticodon-binding domain of class I aminoacyl-tRNA synthetases
2 2 2 0 SCOP 54791 Eukaryotic type KH-domain (KH-domain type I)
2 2 1 0 SCOP 55060 GHMP Kinase, C-terminal domain
2 2 2 0 SCOP 81891 Poly A polymerase C-terminal region-like
2 2 1 0 SCOP 81660 Metal cation-transporting ATPase, ATP-binding domain N
2 2 2 0 SCOP 63380 Riboflavin synthase domain-like
2 2 2 0 SCOP 46600 C-terminal UvrC-binding domain of UvrB
2 2 1 1 SCOP 56327 LDH C-terminal domain-like
2 2 1 0 SCOP 63418 MurE/MurF N-terminal domain
2 2 1 0 SCOP 110921 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
2 2 1 0 SCOP 51984 MurCD N-terminal domain
2 2 2 0 SCOP 54768 dsRNA-binding domain-like
2 2 2 0 SCOP 141259 CarD-like
2 2 1 0 SCOP 47831 Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
2 1 1 1 SCOP 56053 Ribosomal protein L6
2 2 2 0 SCOP 55545 beta-N-acetylhexosaminidase-like domain
2 2 2 0 SCOP 55957 Phosphoglucomutase, C-terminal domain
2 2 1 2 SCOP 53743 FucI/AraA N-terminal and middle domains
2 2 1 2 SCOP 50443 FucI/AraA C-terminal domain-like
2 2 2 1 SCOP 81271 TGS-like
2 2 1 0 SCOP 102522 Bacterial fluorinating enzyme, N-terminal domain
2 2 2 0 SCOP 88688 Families 57/38 glycoside transferase middle domain
2 1 1 0 SCOP 49493 HSP40/DnaJ peptide-binding domain
2 1 1 1 SCOP 55666 Ribonuclease PH domain 2-like
1 1 1 1 SCOP 56731 DNA primase core
1 1 1 0 SCOP 48013 NusB-like
1 1 1 0 SCOP 53790 Tetrapyrrole methylase
1 1 1 1 SCOP 74982 Small protein B (SmpB)
1 1 1 1 SCOP 56808 Ribosomal protein L1
1 1 1 1 SCOP 47973 Ribosomal protein S7
1 1 1 0 SCOP 46911 Ribosomal protein S18
1 1 1 0 SCOP 75304 Amidase signature (AS) enzymes
1 1 1 1 SCOP 143597 YojJ-like
1 1 1 1 SCOP 56420 Peptide deformylase
1 1 1 0 SCOP 56112 Protein kinase-like (PK-like)
1 1 1 0 SCOP 142433 CinA-like
1 1 1 0 SCOP 54197 HIT-like
1 1 1 0 SCOP 89919 Ribosome-binding factor A, RbfA
1 1 1 1 SCOP 54999 Ribosomal protein S10
1 1 1 1 SCOP 52166 Ribosomal protein L4
1 1 1 0 SCOP 54189 Ribosomal proteins S24e, L23 and L15e
1 1 1 1 SCOP 54570 Ribosomal protein S19
1 1 1 1 SCOP 54843 Ribosomal protein L22
1 1 1 1 SCOP 54686 Ribosomal protein L16p/L10e
1 1 1 1 SCOP 50193 Ribosomal protein L14
1 1 1 1 SCOP 55282 RL5-like
1 1 1 1 SCOP 56047 Ribosomal protein S8
1 1 1 1 SCOP 52080 Ribosomal proteins L15p and L18e
1 1 1 0 SCOP 103491 Preprotein translocase SecY subunit
1 1 1 0 SCOP 57840 Ribosomal protein L36
1 1 1 1 SCOP 46946 S13-like H2TH domain
1 1 1 1 SCOP 64263 Prokaryotic ribosomal protein L17
1 1 1 0 SCOP 143034 L35p-like
1 1 1 1 SCOP 74731 Ribosomal protein L20
1 1 1 0 SCOP 56214 4'-phosphopantetheinyl transferase
1 1 1 0 SCOP 141091 L21p-like
1 1 1 0 SCOP 110324 Ribosomal L27 protein-like
1 1 1 0 SCOP 47336 ACP-like
1 1 1 1 SCOP 75625 YebC-like
1 1 1 0 SCOP 47729 IHF-like DNA-binding proteins
1 1 1 0 SCOP 160369 Ribosomal protein L10-like
1 1 1 0 SCOP 46992 Ribosomal protein S20
1 1 1 0 SCOP 81333 F1F0 ATP synthase subunit C
1 1 1 1 SCOP 55068 Peptide methionine sulfoxide reductase
1 1 1 0 SCOP 109755 PhoU-like
1 1 1 1 SCOP 52161 Ribosomal protein L13
1 1 1 1 SCOP 47060 S15/NS1 RNA-binding domain
1 1 1 0 SCOP 82784 OsmC-like
1 1 1 1 SCOP 51351 Triosephosphate isomerase (TIM)
1 1 1 1 SCOP 55194 Ribosome recycling factor, RRF
1 1 1 0 SCOP 54565 Ribosomal protein S16
1 1 1 0 SCOP 51316 Mss4-like
1 1 1 1 SCOP 69765 IpsF-like
1 1 1 1 SCOP 51730 FAD-linked oxidoreductase
1 1 1 0 SCOP 55821 YrdC/RibB
1 1 1 0 SCOP 51261 Duplicated hybrid motif
1 1 1 1 SCOP 103263 Chorismate synthase, AroC
1 1 1 1 SCOP 51283 dUTPase-like
1 1 1 1 SCOP 111337 QueA-like
1 1 1 1 SCOP 51713 tRNA-guanine transglycosylase
1 1 1 0 SCOP 54292 2Fe-2S ferredoxin-like
1 1 1 1 SCOP 51412 Inosine monophosphate dehydrogenase (IMPDH)
1 1 1 1 SCOP 52313 Ribosomal protein S2
1 1 1 1 SCOP 64005 Undecaprenyl diphosphate synthase
1 1 1 0 SCOP 56655 Carbohydrate phosphatase
1 1 1 1 SCOP 54060 His-Me finger endonucleases
1 1 1 0 SCOP 50685 Barwin-like endoglucanases
1 1 1 0 SCOP 55129 Ribosomal protein L30p/L7e
1 1 1 0 SCOP 46561 Ribosomal protein L29 (L29p)
1 1 1 0 SCOP 54995 Ribosomal protein S6
1 1 1 0 SCOP 49764 HSP20-like chaperones
1 1 1 1 SCOP 56104 SAICAR synthase-like
1 1 1 0 SCOP 50182 Sm-like ribonucleoproteins
1 1 1 1 SCOP 52949 Macro domain-like
1 1 1 0 SCOP 81296 E set domains
1 1 1 1 SCOP 69500 DTD-like
1 1 1 0 SCOP 52799 (Phosphotyrosine protein) phosphatases II
1 1 1 1 SCOP 56634 Heme-dependent catalase-like
1 1 1 0 SCOP 48317 Acid phosphatase/Vanadium-dependent haloperoxidase
1 1 1 1 SCOP 88723 PIN domain-like
1 1 1 1 SCOP 53590 Nucleoside hydrolase
1 1 1 0 SCOP 52499 Isochorismatase-like hydrolases
1 1 1 0 SCOP 48403 Ankyrin repeat
1 1 1 0 SCOP 159468 AtpF-like
1 1 1 0 SCOP 53774 Glutaminase/Asparaginase
1 1 1 0 SCOP 54928 RNA-binding domain, RBD
1 1 1 0 SCOP 47819 HRDC-like
1 1 1 0 SCOP 51197 Clavaminate synthase-like
1 1 1 0 SCOP 103486 V-type ATP synthase subunit C
1 1 1 0 SCOP 55257 RBP11-like subunits of RNA polymerase
1 1 1 1 SCOP 56529 FAH
1 1 1 1 SCOP 64153 YjeF N-terminal domain-like
1 1 1 0 SCOP 58113 Apolipoprotein A-I
1 1 1 0 SCOP 52058 L domain-like
1 1 1 1 SCOP 141734 HisI-like
1 1 1 0 SCOP 55931 Glutamine synthetase/guanido kinase
1 1 1 0 SCOP 144091 Rhomboid-like
1 1 1 1 SCOP 111038 YjbQ-like
1 1 1 0 SCOP 51717 Dihydropteroate synthetase-like
1 1 1 0 SCOP 56601 beta-lactamase/transpeptidase-like
1 1 1 0 SCOP 141571 Pentapeptide repeat-like
1 1 1 0 SCOP 55718 SCP-like
1 1 1 0 SCOP 102712 JAB1/MPN domain
1 1 1 1 SCOP 50494 Trypsin-like serine proteases
1 1 1 0 SCOP 52255 N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
1 1 1 1 SCOP 56266 DmpA/ArgJ-like
1 1 1 0 SCOP 57783 Zinc beta-ribbon
1 1 1 0 SCOP 82771 GIY-YIG endonuclease
1 1 1 0 SCOP 117916 Fe-S cluster assembly (FSCA) domain-like
1 1 1 0 SCOP 46767 Methylated DNA-protein cysteine methyltransferase, C-terminal domain
1 1 1 0 SCOP 56954 Outer membrane efflux proteins (OEP)
1 1 1 1 SCOP 89733 L-sulfolactate dehydrogenase-like
1 1 1 1 SCOP 64167 SurE-like
1 1 1 0 SCOP 110857 Gamma-glutamyl cyclotransferase-like
1 1 1 0 SCOP 55154 CYTH-like phosphatases
1 1 1 0 SCOP 161111 Cation efflux protein transmembrane domain-like
1 1 1 0 SCOP 109854 DinB/YfiT-like putative metalloenzymes
1 1 1 0 SCOP 116842 XseB-like
1 1 1 0 SCOP 53218 Molybdenum cofactor biosynthesis proteins
1 1 1 0 SCOP 54736 ClpS-like
1 1 1 1 SCOP 111304 Recombination protein RecR
1 1 1 0 SCOP 50800 PK beta-barrel domain-like
1 1 1 0 SCOP 159894 YgaC/TfoX-N like
1 1 1 1 SCOP 69796 Thymidylate synthase-complementing protein Thy1
1 1 1 1 SCOP 53732 Aconitase iron-sulfur domain
1 1 1 1 SCOP 69065 RNase III domain-like
1 1 1 0 SCOP 55200 Translation initiation factor IF3, C-terminal domain
1 1 1 0 SCOP 159245 AttH-like
1 1 1 0 SCOP 82689 Mechanosensitive channel protein MscS (YggB), C-terminal domain
1 1 1 0 SCOP 141694 AF2212/PG0164-like
1 1 1 0 SCOP 111369 HlyD-like secretion proteins
1 1 1 0 SCOP 51004 C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
1 1 1 0 SCOP 81330 Gated mechanosensitive channel
1 1 1 0 SCOP 118215 Proton glutamate symport protein
1 1 1 0 SCOP 102588 LmbE-like
1 1 1 0 SCOP 160537 SpoVG-like
1 1 1 0 SCOP 159888 YdhG-like
1 1 1 1 SCOP 140478 LemA-like
1 1 1 1 SCOP 53323 Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
1 1 1 1 SCOP 143631 ApbE-like
1 1 1 0 SCOP 117457 FumA C-terminal domain-like
1 1 1 0 SCOP 75138 HprK N-terminal domain-like
1 1 1 1 SCOP 53182 Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase)
1 1 1 1 SCOP 110738 Glycerate kinase I
1 1 1 0 SCOP 69917 OMPT-like
1 1 1 1 SCOP 51604 Enolase C-terminal domain-like
1 1 1 0 SCOP 75471 YhbY-like
1 1 1 0 SCOP 69754 Ribosome binding protein Y (YfiA homologue)
1 1 1 1 SCOP 110395 CutC-like
1 1 1 0 SCOP 82171 DPP6 N-terminal domain-like
1 1 1 0 SCOP 55136 Probable bacterial effector-binding domain
1 1 1 1 SCOP 56091 DNA ligase/mRNA capping enzyme, catalytic domain
1 1 1 0 SCOP 102546 RbsD-like
1 1 1 0 SCOP 50346 PRC-barrel domain
1 1 1 0 SCOP 143437 THUMP domain-like
1 1 1 1 SCOP 50465 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
1 1 1 0 SCOP 48498 Tetracyclin repressor-like, C-terminal domain
1 1 1 1 SCOP 69864 Argininosuccinate synthetase, C-terminal domain
1 1 1 0 SCOP 55424 FAD/NAD-linked reductases, dimerisation (C-terminal) domain
1 1 1 0 SCOP 52743 Subtilisin-like
1 1 1 0 SCOP 48024 N-terminal domain of DnaB helicase
1 1 1 0 SCOP 56003 Molybdenum cofactor-binding domain
1 1 1 0 SCOP 82866 Multidrug efflux transporter AcrB transmembrane domain
1 1 1 0 SCOP 143865 CorA soluble domain-like
1 1 1 1 SCOP 48592 GroEL equatorial domain-like
1 1 1 1 SCOP 69336 Alpha subunit of glutamate synthase, C-terminal domain
1 1 1 1 SCOP 51690 Nicotinate/Quinolinate PRTase C-terminal domain-like
1 1 1 0 SCOP 57938 DnaJ/Hsp40 cysteine-rich domain
1 1 1 0 SCOP 55103 FAD-linked oxidases, C-terminal domain
1 1 1 0 SCOP 101898 NHL repeat
1 1 1 0 SCOP 81923 Double Clp-N motif
1 1 1 0 SCOP 63520 PTS-regulatory domain, PRD
1 1 1 0 SCOP 46906 Ribosomal protein L11, C-terminal domain
1 1 1 0 SCOP 49344 CBD9-like
1 1 1 0 SCOP 118352 HSP33 redox switch-like
1 1 1 0 SCOP 56014 Nitrite and sulphite reductase 4Fe-4S domain-like
1 1 1 1 SCOP 54821 Ribosomal protein S3 C-terminal domain
1 1 1 0 SCOP 52935 PK C-terminal domain-like
1 1 1 0 SCOP 109635 DnaK suppressor protein DksA, alpha-hairpin domain
1 1 1 0 SCOP 50965 Galactose oxidase, central domain
1 1 1 0 SCOP 118116 DNA mismatch repair protein MutL
1 1 1 0 SCOP 47789 C-terminal domain of RNA polymerase alpha subunit
1 1 1 0 SCOP 55658 L9 N-domain-like
1 1 1 1 SCOP 55816 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
1 1 1 1 SCOP 68923 PEP carboxykinase N-terminal domain
1 1 1 0 SCOP 82679 N-utilization substance G protein NusG, N-terminal domain
1 1 1 0 SCOP 56436 C-type lectin-like
1 1 1 0 SCOP 55190 Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
1 1 1 0 SCOP 69055 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
1 1 1 0 SCOP 56037 PheT/TilS domain
1 1 1 0 SCOP 58014 Coiled-coil domain of nucleotide exchange factor GrpE
1 1 1 0 SCOP 63999 Thiamin pyrophosphokinase, catalytic domain
1 1 1 1 SCOP 55307 Tubulin C-terminal domain-like
1 1 1 1 SCOP 140990 FtsH protease domain-like
1 1 1 0 SCOP 142984 Nqo1 middle domain-like
1 1 1 1 SCOP 50621 Alanine racemase C-terminal domain-like
1 1 1 1 SCOP 54719 Fe,Mn superoxide dismutase (SOD), C-terminal domain
1 1 1 0 SCOP 52021 Carbamoyl phosphate synthetase, small subunit N-terminal domain
1 1 1 1 SCOP 54826 Enolase N-terminal domain-like
1 1 1 1 SCOP 52029 GroEL apical domain-like
1 1 1 0 SCOP 54665 CO dehydrogenase molybdoprotein N-domain-like
1 1 1 0 SCOP 47979 Iron-dependent repressor protein, dimerization domain
1 1 1 1 SCOP 53920 Fe-only hydrogenase
1 1 1 1 SCOP 54810 GMP synthetase C-terminal dimerisation domain
1 1 1 1 SCOP 56425 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
1 1 1 1 SCOP 101904 GyrA/ParC C-terminal domain-like
1 1 1 0 SCOP 57825 Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain
1 1 1 0 SCOP 57863 ArfGap/RecO-like zinc finger
1 1 1 0 SCOP 143548 Serine metabolism enzymes domain
1 1 1 0 SCOP 52279 Beta-D-glucan exohydrolase, C-terminal domain
1 1 1 0 SCOP 47364 Domain of the SRP/SRP receptor G-proteins
1 1 1 0 SCOP 48300 Ribosomal protein L7/12, oligomerisation (N-terminal) domain
1 1 1 1 SCOP 100920 Heat shock protein 70kD (HSP70), peptide-binding domain
1 1 1 0 SCOP 48310 Aldehyde ferredoxin oxidoreductase, C-terminal domains
1 1 1 0 SCOP 55252 C-terminal domain of arginine repressor
1 1 1 0 SCOP 90002 Hypothetical protein YjiA, C-terminal domain
1 1 1 0 SCOP 144083 Magnesium transport protein CorA, transmembrane region
1 1 1 0 SCOP 46934 UBA-like
1 1 1 0 SCOP 160240 Cation efflux protein cytoplasmic domain-like
1 1 1 0 SCOP 100879 Lesion bypass DNA polymerase (Y-family), little finger domain
1 1 1 0 SCOP 55945 TATA-box binding protein-like
1 1 1 0 SCOP 52113 BRCT domain
1 1 1 0 SCOP 53155 Methylated DNA-protein cysteine methyltransferase domain
1 1 1 0 SCOP 82861 Mechanosensitive channel protein MscS (YggB), transmembrane region
1 1 1 0 SCOP 75420 YhbC-like, N-terminal domain
1 1 1 0 SCOP 54752 RecA protein, C-terminal domain
1 1 1 0 SCOP 100934 Heat shock protein 70kD (HSP70), C-terminal subdomain
1 1 1 0 SCOP 140490 Nqo1C-terminal domain-like
1 1 1 0 SCOP 102735 Trigger factor ribosome-binding domain
1 1 1 1 SCOP 143975 IlvD/EDD N-terminal domain-like
1 1 1 0 SCOP 46557 GreA transcript cleavage protein, N-terminal domain
1 1 1 0 SCOP 54675 Nicotinate/Quinolinate PRTase N-terminal domain-like
1 1 1 0 SCOP 117987 CRISPR-associated protein
1 1 1 0 SCOP 47807 5' to 3' exonuclease, C-terminal subdomain
1 1 1 0 SCOP 47446 Signal peptide-binding domain
1 1 1 0 SCOP 50615 N-terminal domain of alpha and beta subunits of F1 ATP synthase
1 1 1 1 SCOP 64397 Hsp33 domain
1 1 1 0 SCOP 82708 R3H domain
1 1 1 0 SCOP 141986 LD-carboxypeptidase A C-terminal domain-like
1 1 1 1 SCOP 55271 DNA repair protein MutS, domain I
1 1 1 0 SCOP 55048 Probable ACP-binding domain of malonyl-CoA ACP transacylase
1 1 1 0 SCOP 48108 Carbamoyl phosphate synthetase, large subunit connection domain
1 1 1 1 SCOP 82051 Obg GTP-binding protein N-terminal domain
1 1 1 0 SCOP 142019 Nqo1 FMN-binding domain-like
1 1 1 0 SCOP 55261 GAD domain-like
1 1 1 0 SCOP 54713 Elongation factor Ts (EF-Ts), dimerisation domain
1 1 1 0 SCOP 110942 HSP90 C-terminal domain
1 1 1 0 SCOP 54747 Ribosomal L11/L12e N-terminal domain
1 1 1 1 SCOP 46609 Fe,Mn superoxide dismutase (SOD), N-terminal domain
1 1 1 0 SCOP 69742 Glutamyl tRNA-reductase catalytic, N-terminal domain
1 1 1 0 SCOP 56228 Aldehyde ferredoxin oxidoreductase, N-terminal domain
1 1 1 0 SCOP 47917 C-terminal domain of alpha and beta subunits of F1 ATP synthase
1 1 1 1 SCOP 48168 R1 subunit of ribonucleotide reductase, N-terminal domain
1 1 1 1 SCOP 81886 Helical scaffold and wing domains of SecA
1 1 1 0 SCOP 54849 GroEL-intermediate domain like
1 1 1 0 SCOP 56194 Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
1 1 1 0 SCOP 89000 post-HMGL domain-like
1 1 1 0 SCOP 63862 Thiamin pyrophosphokinase, substrate-binding domain
1 1 1 0 SCOP 52156 Initiation factor IF2/eIF5b, domain 3
1 1 1 0 SCOP 116878 TrmE connector domain
1 1 1 0 SCOP 51064 Head domain of nucleotide exchange factor GrpE
1 1 1 0 SCOP 47005 Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
1 1 1 0 SCOP 55653 Ribosomal protein L9 C-domain
1 1 1 0 SCOP 101790 Aminomethyltransferase beta-barrel domain
1 1 1 0 SCOP 143517 TRCF domain-like
1 1 1 1 SCOP 101353 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
1 1 1 0 SCOP 56553 Insert subdomain of RNA polymerase alpha subunit
1 1 1 0 SCOP 101821 Aminopeptidase/glucanase lid domain
1 1 1 0 SCOP 54893 Aspartate carbamoyltransferase, Regulatory-chain, N-terminal domain
1 1 1 0 SCOP 54364 Translation initiation factor IF3, N-terminal domain
1 1 1 0 SCOP 69705 Transcription factor NusA, N-terminal domain
1 1 1 0 SCOP 53150 DNA repair protein MutS, domain II
1 1 1 1 SCOP 81767 Pre-protein crosslinking domain of SecA
1 1 1 0 SCOP 56519 Penicillin binding protein dimerisation domain
1 1 1 0 SCOP 81799 Putative methyltransferase TM0872, insert domain
1 1 1 0 SCOP 46915 Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
1 1 1 0 SCOP 109736 FGAM synthase PurL, linker domain
1 1 1 0 SCOP 160996 HI0933 insert domain-like
1 1 1 0 SCOP 57770 Methionyl-tRNA synthetase (MetRS), Zn-domain

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The following superfamilies have one or more weak hits:

SCOP superfamily Myosin rod fragments
SCOP superfamily Tumor suppressor gene product Apc
SCOP superfamily Cysteine-rich DNA binding domain, (DM domain)
SCOP superfamily Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
SCOP superfamily YhbC-like, C-terminal domain
SCOP superfamily Cell wall binding repeat
SCOP superfamily Rho N-terminal domain-like
SCOP superfamily Calcium-dependent phosphotriesterase
SCOP superfamily Methyl-accepting chemotaxis protein (MCP) signaling domain
SCOP superfamily Tropomyosin
SCOP superfamily RING/U-box
SCOP superfamily Porins
SCOP superfamily DNA topoisomerase IV, alpha subunit
SCOP superfamily Nitrile hydratase alpha chain
SCOP superfamily Pentein
SCOP superfamily Glucose permease domain IIB
SCOP superfamily CO dehydrogenase flavoprotein C-terminal domain-like
SCOP superfamily L30e-like
SCOP superfamily Nucleoside diphosphate kinase, NDK
SCOP superfamily DNA-binding domain of Mlu1-box binding protein MBP1
SCOP superfamily Sialidases
SCOP superfamily TNF-like
SCOP superfamily Fibronectin type III
SCOP superfamily Multiheme cytochromes
SCOP superfamily DBL homology domain (DH-domain)
SCOP superfamily Apolipophorin-III
SCOP superfamily Ribbon-helix-helix
SCOP superfamily YfgJ-like
SCOP superfamily V-type ATPase subunit E-like
SCOP superfamily Heme iron utilization protein-like
SCOP superfamily UbiD C-terminal domain-like
SCOP superfamily YefM-like
SCOP superfamily OmpH-like
SCOP superfamily Sporulation related repeat
SCOP superfamily DEK C-terminal domain
SCOP superfamily BAR/IMD domain-like
SCOP superfamily Mitochondrial carrier
SCOP superfamily 2-methylcitrate dehydratase PrpD
SCOP superfamily Formin homology 2 domain (FH2 domain)

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