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Methylobacterium populi BJ001 superfamily assignments

Taxonomy
Taxonomy browser entry

Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium; Methylobacterium populi; Methylobacterium populi BJ001

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Fasta format sequences
Domain assignments


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Assignment statistics

Sequences: 5365 total
3356 (63 %) with assignment
310 average length
61 % amino acid coverage
Domains: 5028 total
753 unique superfamilies
572 unique families
300 average length
6.7 average superfamily size
85 % formed by duplication
Domain combinations: 495 domain pairs
1302 unique architectures

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Superfamily assignments

Domains

Proteins

Architectures

Families

SCOP link

Superfamilies

289 251 66 8 SCOP 52540 P-loop containing nucleoside triphosphate hydrolases
176 89 60 1 SCOP 55785 PYP-like sensor domain (PAS domain)
136 128 47 1 SCOP 52172 CheY-like
133 131 24 9 SCOP 51735 NAD(P)-binding Rossmann-fold domains
110 110 21 1 SCOP 46785 "Winged helix" DNA-binding domain
93 92 55 3 SCOP 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
85 85 8 1 SCOP 53850 Periplasmic binding protein-like II
75 74 17 5 SCOP 53335 S-adenosyl-L-methionine-dependent methyltransferases
71 70 41 0 SCOP 47384 Homodimeric domain of signal transducing histidine kinase
60 60 10 3 SCOP 52833 Thioredoxin-like
58 22 7 1 SCOP 82693 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
55 51 16 3 SCOP 51905 FAD/NAD(P)-binding domain
54 49 13 0 SCOP 46689 Homeodomain-like
50 50 8 6 SCOP 53474 alpha/beta-Hydrolases
50 50 4 0 SCOP 103473 MFS general substrate transporter
49 45 12 4 SCOP 53448 Nucleotide-diphospho-sugar transferases
48 46 10 4 SCOP 53756 UDP-Glycosyltransferase/glycogen phosphorylase
48 25 9 1 SCOP 82866 Multidrug efflux transporter AcrB transmembrane domain
44 22 7 0 SCOP 82714 Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
38 37 3 1 SCOP 161098 MetI-like
38 37 13 2 SCOP 55073 Nucleotide cyclase
38 38 10 0 SCOP 47413 lambda repressor-like DNA-binding domains
37 28 26 2 SCOP 55781 GAF domain-like
36 26 19 3 SCOP 50249 Nucleic acid-binding proteins
36 36 8 4 SCOP 53098 Ribonuclease H-like
36 35 5 5 SCOP 53383 PLP-dependent transferases
35 31 8 1 SCOP 111369 HlyD-like secretion proteins
34 9 9 0 SCOP 51120 beta-Roll
32 32 8 0 SCOP 46894 C-terminal effector domain of the bipartite response regulators
30 30 4 1 SCOP 55729 Acyl-CoA N-acyltransferases (Nat)
29 29 3 1 SCOP 56935 Porins
29 21 8 3 SCOP 46626 Cytochrome c
28 28 9 1 SCOP 58104 Methyl-accepting chemotaxis protein (MCP) signaling domain
27 23 11 3 SCOP 52402 Adenine nucleotide alpha hydrolases-like
26 26 10 4 SCOP 56784 HAD-like
26 16 7 6 SCOP 52518 Thiamin diphosphate-binding fold (THDP-binding)
24 21 15 6 SCOP 54211 Ribosomal protein S5 domain 2-like
24 24 10 2 SCOP 53955 Lysozyme-like
23 23 6 0 SCOP 56300 Metallo-dependent phosphatases
23 23 4 6 SCOP 51182 RmlC-like cupins
22 22 8 2 SCOP 52317 Class I glutamine amidotransferase-like
22 14 6 5 SCOP 53067 Actin-like ATPase domain
22 22 2 3 SCOP 56281 Metallo-hydrolase/oxidoreductase
22 22 5 1 SCOP 90123 ABC transporter transmembrane region
21 21 4 3 SCOP 102114 Radical SAM enzymes
21 21 3 0 SCOP 47616 GST C-terminal domain-like
20 19 13 4 SCOP 56059 Glutathione synthetase ATP-binding domain-like
18 18 3 3 SCOP 47240 Ferritin-like
18 17 6 1 SCOP 56349 DNA breaking-rejoining enzymes
18 18 5 0 SCOP 51206 cAMP-binding domain-like
18 12 4 0 SCOP 103481 Multidrug resistance efflux transporter EmrE
18 14 6 1 SCOP 51338 Composite domain of metallo-dependent hydrolases
17 16 10 0 SCOP 48452 TPR-like
17 17 9 0 SCOP 54292 2Fe-2S ferredoxin-like
17 16 5 4 SCOP 52096 ClpP/crotonase
17 14 11 3 SCOP 51445 (Trans)glycosidases
17 17 5 0 SCOP 141523 L,D-transpeptidase catalytic domain-like
16 16 9 3 SCOP 52374 Nucleotidylyl transferase
16 13 7 6 SCOP 100950 NagB/RpiA/CoA transferase-like
16 16 4 1 SCOP 50129 GroES-like
16 16 5 1 SCOP 55811 Nudix
16 13 2 4 SCOP 54637 Thioesterase/thiol ester dehydrase-isomerase
16 15 3 0 SCOP 88659 Sigma3 and sigma4 domains of RNA polymerase sigma factors
16 16 8 1 SCOP 56176 FAD-binding/transporter-associated domain-like
15 15 7 5 SCOP 51556 Metallo-dependent hydrolases
15 12 5 5 SCOP 51161 Trimeric LpxA-like enzymes
15 15 5 1 SCOP 56801 Acetyl-CoA synthetase-like
15 14 3 1 SCOP 48179 6-phosphogluconate dehydrogenase C-terminal domain-like
15 11 5 1 SCOP 56003 Molybdenum cofactor-binding domain
15 15 4 3 SCOP 55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
14 14 10 2 SCOP 55681 Class II aaRS and biotin synthetases
14 14 6 5 SCOP 51621 Phosphoenolpyruvate/pyruvate domain
14 14 6 1 SCOP 109604 HD-domain/PDEase-like
14 14 6 0 SCOP 141868 EAL domain-like
14 14 9 2 SCOP 56601 beta-lactamase/transpeptidase-like
14 13 4 2 SCOP 54593 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
14 14 2 1 SCOP 88946 Sigma2 domain of RNA polymerase sigma factors
14 14 4 1 SCOP 53822 Periplasmic binding protein-like I
14 8 3 2 SCOP 53901 Thiolase-like
14 14 1 1 SCOP 48498 Tetracyclin repressor-like, C-terminal domain
13 13 7 1 SCOP 56112 Protein kinase-like (PK-like)
13 13 6 3 SCOP 56235 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
13 12 6 1 SCOP 81301 Nucleotidyltransferase
13 10 10 0 SCOP 55021 ACT-like
12 12 8 2 SCOP 54862 4Fe-4S ferredoxins
12 12 2 1 SCOP 88723 PIN domain-like
12 12 2 2 SCOP 54427 NTF2-like
12 12 3 1 SCOP 55961 Bet v1-like
12 12 4 0 SCOP 47598 Ribbon-helix-helix
12 9 7 2 SCOP 49503 Cupredoxins
12 12 1 0 SCOP 56925 OMPA-like
12 8 4 0 SCOP 50156 PDZ domain-like
12 12 8 0 SCOP 47090 PGBD-like
12 4 1 1 SCOP 53738 Phosphoglucomutase, first 3 domains
11 11 5 3 SCOP 53187 Zn-dependent exopeptidases
11 11 2 1 SCOP 50475 FMN-binding split barrel
11 10 9 2 SCOP 50447 Translation proteins
11 11 3 0 SCOP 46955 Putative DNA-binding domain
11 11 6 1 SCOP 50494 Trypsin-like serine proteases
11 11 3 0 SCOP 53300 vWA-like
11 11 4 1 SCOP 56645 Acyl-CoA dehydrogenase NM domain-like
11 11 4 1 SCOP 47203 Acyl-CoA dehydrogenase C-terminal domain-like
10 10 4 3 SCOP 53613 Ribokinase-like
10 8 4 0 SCOP 64518 Phase 1 flagellin
10 10 7 0 SCOP 81296 E set domains
10 4 4 0 SCOP 51126 Pectin lyase-like
10 10 3 0 SCOP 53041 Resolvase-like
10 9 6 1 SCOP 52440 PreATP-grasp domain
10 10 3 1 SCOP 54373 FAD-linked reductases, C-terminal domain
10 10 2 0 SCOP 47741 CO dehydrogenase ISP C-domain like
9 9 4 5 SCOP 51569 Aldolase
9 9 2 3 SCOP 52218 Flavoproteins
9 9 2 0 SCOP 49764 HSP20-like chaperones
9 9 4 0 SCOP 54001 Cysteine proteinases
9 9 1 1 SCOP 52499 Isochorismatase-like hydrolases
9 7 3 0 SCOP 55008 HMA, heavy metal-associated domain
9 9 3 1 SCOP 52151 FabD/lysophospholipase-like
9 9 2 1 SCOP 53807 "Helical backbone" metal receptor
9 9 3 1 SCOP 51679 Bacterial luciferase-like
9 9 5 4 SCOP 52467 DHS-like NAD/FAD-binding domain
9 9 6 1 SCOP 53706 Formate dehydrogenase/DMSO reductase, domains 1-3
8 8 1 4 SCOP 51366 Ribulose-phoshate binding barrel
8 8 6 0 SCOP 47336 ACP-like
8 8 6 1 SCOP 55174 Alpha-L RNA-binding motif
8 7 4 1 SCOP 52821 Rhodanese/Cell cycle control phosphatase
8 8 2 2 SCOP 53720 ALDH-like
8 8 3 3 SCOP 48150 DNA-glycosylase
8 8 4 1 SCOP 51395 FMN-linked oxidoreductases
8 8 7 1 SCOP 54534 FKBP-like
8 8 4 0 SCOP 56317 Carbon-nitrogen hydrolase
8 8 3 3 SCOP 52283 Formate/glycerate dehydrogenase catalytic domain-like
8 8 3 2 SCOP 55931 Glutamine synthetase/guanido kinase
8 8 6 1 SCOP 54631 CBS-domain pair
8 8 5 0 SCOP 50692 ADC-like
8 8 5 2 SCOP 53218 Molybdenum cofactor biosynthesis proteins
8 8 2 0 SCOP 69047 Hypothetical protein YjbJ
8 7 7 0 SCOP 47781 RuvA domain 2-like
8 8 3 1 SCOP 50346 PRC-barrel domain
8 8 3 1 SCOP 55424 FAD/NAD-linked reductases, dimerisation (C-terminal) domain
8 8 4 1 SCOP 54665 CO dehydrogenase molybdoprotein N-domain-like
8 7 6 2 SCOP 63380 Riboflavin synthase domain-like
7 7 3 2 SCOP 53271 PRTase-like
7 7 5 1 SCOP 53790 Tetrapyrrole methylase
7 7 5 3 SCOP 55120 Pseudouridine synthase
7 7 2 4 SCOP 53659 Isocitrate/Isopropylmalate dehydrogenase-like
7 7 4 1 SCOP 75217 alpha/beta knot
7 7 3 0 SCOP 52980 Restriction endonuclease-like
7 7 4 1 SCOP 55486 Metalloproteases ("zincins"), catalytic domain
7 7 1 1 SCOP 82784 OsmC-like
7 7 2 1 SCOP 53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes
7 7 1 2 SCOP 56655 Carbohydrate phosphatase
7 7 1 1 SCOP 48576 Terpenoid synthases
7 7 3 1 SCOP 63829 Calcium-dependent phosphotriesterase
7 7 1 1 SCOP 51430 NAD(P)-linked oxidoreductase
7 6 5 0 SCOP 49899 Concanavalin A-like lectins/glucanases
7 7 3 2 SCOP 48208 Six-hairpin glycosidases
7 7 3 2 SCOP 88713 Glycoside hydrolase/deacetylase
7 7 3 1 SCOP 81342 Transmembrane di-heme cytochromes
7 7 6 1 SCOP 51230 Single hybrid motif
7 7 4 1 SCOP 50022 ISP domain
7 6 4 0 SCOP 81901 HCP-like
7 7 3 1 SCOP 103088 OmpA-like
7 6 4 0 SCOP 141371 PilZ domain-like
7 7 6 1 SCOP 46548 alpha-helical ferredoxin
7 7 1 0 SCOP 48008 GntR ligand-binding domain-like
7 7 6 2 SCOP 52343 Ferredoxin reductase-like, C-terminal NADP-linked domain
7 4 4 1 SCOP 54980 EF-G C-terminal domain-like
7 7 4 0 SCOP 81665 Calcium ATPase, transmembrane domain M
7 7 5 0 SCOP 158472 HAMP domain-like
7 7 4 0 SCOP 81653 Calcium ATPase, transduction domain A
6 6 4 2 SCOP 53927 Cytidine deaminase-like
6 6 2 2 SCOP 52141 Uracil-DNA glycosylase-like
6 6 3 1 SCOP 75304 Amidase signature (AS) enzymes
6 6 2 1 SCOP 117143 Flagellar hook protein flgE
6 6 5 0 SCOP 47226 Histidine-containing phosphotransfer domain, HPT domain
6 5 4 1 SCOP 50891 Cyclophilin-like
6 6 1 1 SCOP 56634 Heme-dependent catalase-like
6 6 3 2 SCOP 74650 Galactose mutarotase-like
6 6 2 0 SCOP 54909 Dimeric alpha+beta barrel
6 5 3 0 SCOP 50341 CheW-like
6 6 2 1 SCOP 161111 Cation efflux protein transmembrane domain-like
6 6 5 2 SCOP 88697 PUA domain-like
6 6 3 1 SCOP 103025 Folate-binding domain
6 3 1 1 SCOP 63411 LuxS/MPP-like metallohydrolase
6 6 2 0 SCOP 50331 MOP-like
6 3 3 1 SCOP 56024 Phospholipase D/nuclease
6 6 5 1 SCOP 52738 Methylesterase CheB, C-terminal domain
6 6 4 1 SCOP 46565 Chaperone J-domain
6 4 3 1 SCOP 52777 CoA-dependent acyltransferases
6 6 3 0 SCOP 55103 FAD-linked oxidases, C-terminal domain
6 6 5 1 SCOP 47323 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
6 4 4 1 SCOP 56014 Nitrite and sulphite reductase 4Fe-4S domain-like
6 5 3 1 SCOP 52210 Succinyl-CoA synthetase domains
6 3 3 0 SCOP 55124 Nitrite/Sulfite reductase N-terminal domain-like
6 3 2 0 SCOP 49493 HSP40/DnaJ peptide-binding domain
5 5 3 2 SCOP 53697 SIS domain
5 5 4 2 SCOP 50104 Translation proteins SH3-like domain
5 5 4 0 SCOP 57716 Glucocorticoid receptor-like (DNA-binding domain)
5 5 2 1 SCOP 53597 Dihydrofolate reductase-like
5 5 1 1 SCOP 51658 Xylose isomerase-like
5 5 3 2 SCOP 53633 Carbamate kinase-like
5 5 1 1 SCOP 53254 Phosphoglycerate mutase-like
5 5 3 1 SCOP 51419 PLP-binding barrel
5 5 1 1 SCOP 48317 Acid phosphatase/Vanadium-dependent haloperoxidase
5 5 3 1 SCOP 51306 LexA/Signal peptidase
5 5 3 0 SCOP 52266 SGNH hydrolase
5 5 2 0 SCOP 50090 Electron transport accessory proteins
5 5 2 1 SCOP 48264 Cytochrome P450
5 5 1 0 SCOP 143011 RelE-like
5 5 3 2 SCOP 52016 LeuD/IlvD-like
5 4 4 1 SCOP 56524 Oxidoreductase molybdopterin-binding domain
5 5 3 0 SCOP 158682 TerB-like
5 5 3 1 SCOP 50800 PK beta-barrel domain-like
5 5 3 0 SCOP 101801 Surface presentation of antigens (SPOA)
5 5 3 1 SCOP 52242 Cobalamin (vitamin B12)-binding domain
5 5 2 0 SCOP 63867 MoeA C-terminal domain-like
5 5 3 0 SCOP 50199 Staphylococcal nuclease
5 5 4 1 SCOP 53244 MurD-like peptide ligases, peptide-binding domain
5 5 3 1 SCOP 51246 Rudiment single hybrid motif
5 5 4 2 SCOP 52922 TK C-terminal domain-like
5 5 4 1 SCOP 51011 Glycosyl hydrolase domain
5 5 4 2 SCOP 53623 MurD-like peptide ligases, catalytic domain
5 4 2 1 SCOP 56042 PurM C-terminal domain-like
5 5 2 0 SCOP 55447 CO dehydrogenase flavoprotein C-terminal domain-like
5 4 2 1 SCOP 55326 PurM N-terminal domain-like
5 5 1 0 SCOP 160240 Cation efflux protein cytoplasmic domain-like
5 5 2 1 SCOP 63882 MoeA N-terminal region -like
5 5 1 1 SCOP 55031 Bacterial exopeptidase dimerisation domain
4 4 2 1 SCOP 53167 Purine and uridine phosphorylases
4 4 1 0 SCOP 111331 NAD kinase/diacylglycerol kinase-like
4 4 3 1 SCOP 55920 Creatinase/aminopeptidase
4 4 2 0 SCOP 69593 Glycerol-3-phosphate (1)-acyltransferase
4 4 1 0 SCOP 51316 Mss4-like
4 4 1 1 SCOP 48557 L-aspartase-like
4 4 2 0 SCOP 51261 Duplicated hybrid motif
4 4 1 1 SCOP 81345 ABC transporter involved in vitamin B12 uptake, BtuC
4 4 1 0 SCOP 55298 YjgF-like
4 4 2 0 SCOP 75169 DsrEFH-like
4 4 3 2 SCOP 56672 DNA/RNA polymerases
4 4 1 0 SCOP 52799 (Phosphotyrosine protein) phosphatases II
4 4 3 1 SCOP 53328 Formyltransferase
4 4 3 1 SCOP 69572 Activating enzymes of the ubiquitin-like proteins
4 4 3 1 SCOP 56529 FAH
4 2 2 0 SCOP 58113 Apolipoprotein A-I
4 4 1 2 SCOP 52768 Arginase/deacetylase
4 4 1 1 SCOP 52788 Phosphotyrosine protein phosphatases I
4 4 2 1 SCOP 55620 Tetrahydrobiopterin biosynthesis enzymes-like
4 4 1 0 SCOP 143120 YefM-like
4 4 3 0 SCOP 143100 TTHA1013/TTHA0281-like
4 4 1 1 SCOP 54913 GlnB-like
4 4 1 1 SCOP 56219 DNase I-like
4 4 2 0 SCOP 50952 Soluble quinoprotein glucose dehydrogenase
4 4 1 0 SCOP 54975 Acylphosphatase/BLUF domain-like
4 4 1 0 SCOP 140804 YidB-like
4 4 2 1 SCOP 50998 Quinoprotein alcohol dehydrogenase-like
4 3 3 1 SCOP 54814 Prokaryotic type KH domain (KH-domain type II)
4 4 2 0 SCOP 74653 TolA/TonB C-terminal domain
4 3 3 1 SCOP 57938 DnaJ/Hsp40 cysteine-rich domain
4 4 2 2 SCOP 53223 Aminoacid dehydrogenase-like, N-terminal domain
4 4 4 0 SCOP 103190 Sensory domain-like
4 4 4 1 SCOP 56719 Type II DNA topoisomerase
4 2 1 1 SCOP 48029 FliG
4 4 2 1 SCOP 50621 Alanine racemase C-terminal domain-like
4 4 2 0 SCOP 117892 Band 7/SPFH domain
4 4 1 1 SCOP 55957 Phosphoglucomutase, C-terminal domain
4 4 3 0 SCOP 69287 Urease metallochaperone UreE, N-terminal domain
4 4 1 1 SCOP 54368 Glutamine synthetase, N-terminal domain
4 4 3 0 SCOP 47757 Chemotaxis receptor methyltransferase CheR, N-terminal domain
3 2 2 0 SCOP 56214 4'-phosphopantetheinyl transferase
3 3 1 0 SCOP 89447 AbrB/MazE/MraZ-like
3 3 1 0 SCOP 47729 IHF-like DNA-binding proteins
3 3 3 0 SCOP 109998 Triger factor/SurA peptide-binding domain-like
3 3 1 1 SCOP 55068 Peptide methionine sulfoxide reductase
3 2 2 1 SCOP 51283 dUTPase-like
3 3 2 1 SCOP 50685 Barwin-like endoglucanases
3 3 1 1 SCOP 81452 Cytochrome c oxidase subunit III-like
3 3 3 0 SCOP 50182 Sm-like ribonucleoproteins
3 3 2 0 SCOP 55315 L30e-like
3 3 1 1 SCOP 55469 FMN-dependent nitroreductase-like
3 3 2 1 SCOP 48613 Heme oxygenase-like
3 2 2 1 SCOP 48239 Terpenoid cyclases/Protein prenyltransferases
3 3 3 0 SCOP 49785 Galactose-binding domain-like
3 2 2 0 SCOP 54506 Diaminopimelate epimerase-like
3 3 1 1 SCOP 56752 D-aminoacid aminotransferase-like PLP-dependent enzymes
3 2 2 0 SCOP 47819 HRDC-like
3 3 1 2 SCOP 52972 ITPase-like
3 3 1 0 SCOP 51197 Clavaminate synthase-like
3 3 3 1 SCOP 110849 ParB/Sulfiredoxin
3 3 2 0 SCOP 81343 Fumarate reductase respiratory complex transmembrane subunits
3 3 2 1 SCOP 81442 Cytochrome c oxidase subunit I-like
3 3 3 0 SCOP 52954 Class II aaRS ABD-related
3 3 3 0 SCOP 52091 SpoIIaa-like
3 3 3 1 SCOP 51717 Dihydropteroate synthetase-like
3 3 3 0 SCOP 102712 JAB1/MPN domain
3 3 2 0 SCOP 57783 Zinc beta-ribbon
3 3 2 0 SCOP 82771 GIY-YIG endonuclease
3 3 3 0 SCOP 117916 Fe-S cluster assembly (FSCA) domain-like
3 3 3 2 SCOP 55166 Hedgehog/DD-peptidase
3 3 3 1 SCOP 56954 Outer membrane efflux proteins (OEP)
3 3 2 0 SCOP 50118 Cell growth inhibitor/plasmid maintenance toxic component
3 3 2 0 SCOP 55154 CYTH-like phosphatases
3 3 2 1 SCOP 81340 Clc chloride channel
3 3 1 0 SCOP 102215 Creatininase
3 3 2 1 SCOP 54111 Urease, gamma-subunit
3 3 2 1 SCOP 51278 Urease, beta-subunit
3 3 1 0 SCOP 51391 Thiamin phosphate synthase
3 3 1 1 SCOP 118215 Proton glutamate symport protein
3 3 1 1 SCOP 89796 CoA-transferase family III (CaiB/BaiF)
3 2 2 0 SCOP 101386 all-alpha NTP pyrophosphatases
3 3 3 0 SCOP 48295 TrpR-like
3 3 2 0 SCOP 140931 Fic-like
3 3 1 1 SCOP 51703 Cobalamin (vitamin B12)-dependent enzymes
3 3 2 1 SCOP 50486 FMT C-terminal domain-like
3 3 1 0 SCOP 52309 N-(deoxy)ribosyltransferase-like
3 2 2 0 SCOP 81593 Nucleotidyltransferase substrate binding subunit/domain
3 3 1 2 SCOP 51604 Enolase C-terminal domain-like
3 3 1 0 SCOP 50974 Nitrous oxide reductase, N-terminal domain
3 3 2 0 SCOP 75708 Chemotaxis phosphatase CheZ
3 3 1 0 SCOP 56563 Major capsid protein gp5
3 2 2 0 SCOP 53092 Creatinase/prolidase N-terminal domain
3 3 2 1 SCOP 50465 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
3 3 2 0 SCOP 48024 N-terminal domain of DnaB helicase
3 3 2 0 SCOP 46589 tRNA-binding arm
3 3 2 1 SCOP 69336 Alpha subunit of glutamate synthase, C-terminal domain
3 1 1 0 SCOP 55979 DNA clamp
3 3 2 0 SCOP 101898 NHL repeat
3 3 2 1 SCOP 81923 Double Clp-N motif
3 3 2 1 SCOP 48019 post-AAA+ oligomerization domain-like
3 3 3 1 SCOP 52009 Phosphohistidine domain
3 1 1 1 SCOP 55973 S-adenosylmethionine synthetase
3 3 3 1 SCOP 81464 Cytochrome c oxidase subunit II-like, transmembrane region
3 3 3 0 SCOP 142984 Nqo1 middle domain-like
3 3 2 0 SCOP 51294 Hedgehog/intein (Hint) domain
3 3 1 0 SCOP 48163 An anticodon-binding domain of class I aminoacyl-tRNA synthetases
3 3 1 1 SCOP 54826 Enolase N-terminal domain-like
3 3 2 0 SCOP 46977 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
3 2 2 0 SCOP 50882 beta-Barrel protease inhibitors
3 3 1 0 SCOP 90002 Hypothetical protein YjiA, C-terminal domain
3 3 3 0 SCOP 141259 CarD-like
3 3 3 1 SCOP 50677 ValRS/IleRS/LeuRS editing domain
3 3 3 0 SCOP 140490 Nqo1C-terminal domain-like
3 3 1 1 SCOP 143975 IlvD/EDD N-terminal domain-like
3 3 3 1 SCOP 81271 TGS-like
3 3 2 0 SCOP 55048 Probable ACP-binding domain of malonyl-CoA ACP transacylase
3 3 3 1 SCOP 142019 Nqo1 FMN-binding domain-like
3 2 2 1 SCOP 55666 Ribonuclease PH domain 2-like
3 3 2 0 SCOP 101790 Aminomethyltransferase beta-barrel domain
3 3 2 0 SCOP 69737 Urease metallochaperone UreE, C-terminal domain
2 2 1 1 SCOP 56731 DNA primase core
2 2 2 0 SCOP 48013 NusB-like
2 2 2 0 SCOP 55594 HPr-like
2 2 1 0 SCOP 57829 Zn-binding ribosomal proteins
2 2 1 1 SCOP 56420 Peptide deformylase
2 2 1 0 SCOP 54197 HIT-like
2 2 1 1 SCOP 53137 Translational machinery components
2 2 2 1 SCOP 46946 S13-like H2TH domain
2 2 1 1 SCOP 64182 DHH phosphoesterases
2 2 2 0 SCOP 141091 L21p-like
2 2 1 0 SCOP 143800 L28p-like
2 2 1 1 SCOP 75620 Release factor
2 2 2 1 SCOP 75625 YebC-like
2 2 1 0 SCOP 82649 SufE/NifU
2 2 2 2 SCOP 64484 beta and beta-prime subunits of DNA dependent RNA-polymerase
2 2 2 2 SCOP 51730 FAD-linked oxidoreductase
2 2 2 2 SCOP 55821 YrdC/RibB
2 2 1 0 SCOP 89360 HesB-like domain
2 2 2 1 SCOP 51412 Inosine monophosphate dehydrogenase (IMPDH)
2 2 1 1 SCOP 64005 Undecaprenyl diphosphate synthase
2 2 1 0 SCOP 54285 MoaD/ThiS
2 2 1 1 SCOP 55205 EPT/RTPC-like
2 2 1 0 SCOP 82657 BolA-like
2 1 1 0 SCOP 48371 ARM repeat
2 2 1 0 SCOP 52949 Macro domain-like
2 2 1 0 SCOP 143744 GlcG-like
2 2 2 1 SCOP 53649 Alkaline phosphatase-like
2 2 1 1 SCOP 56322 ADC synthase
2 2 1 0 SCOP 55144 LigT-like
2 2 1 1 SCOP 53774 Glutaminase/Asparaginase
2 2 1 1 SCOP 53056 beta-carbonic anhydrase, cab
2 2 1 1 SCOP 101960 Stabilizer of iron transporter SufD
2 2 2 1 SCOP 46458 Globin-like
2 2 1 1 SCOP 81483 Bacterial photosystem II reaction centre, L and M subunits
2 2 2 1 SCOP 102405 MCP/YpsA-like
2 2 2 1 SCOP 53795 PEP carboxykinase-like
2 2 2 1 SCOP 111352 Ammonium transporter
2 2 1 1 SCOP 55331 Tautomerase/MIF
2 2 1 1 SCOP 56266 DmpA/ArgJ-like
2 2 1 1 SCOP 56209 Nitrile hydratase alpha chain
2 2 2 0 SCOP 89550 PHP domain-like
2 2 1 0 SCOP 55797 PR-1-like
2 2 2 0 SCOP 110857 Gamma-glutamyl cyclotransferase-like
2 2 2 2 SCOP 54736 ClpS-like
2 2 2 1 SCOP 53732 Aconitase iron-sulfur domain
2 2 1 1 SCOP 143081 BB1717-like
2 2 1 1 SCOP 82544 GckA/TtuD-like
2 2 1 0 SCOP 48173 Cryptochrome/photolyase FAD-binding domain
2 2 1 0 SCOP 52425 Cryptochrome/photolyase, N-terminal domain
2 2 2 1 SCOP 158634 RPA2825-like
2 2 2 0 SCOP 89095 GatB/YqeY motif
2 2 2 0 SCOP 110087 DR1885-like metal-binding protein
2 2 2 1 SCOP 158694 UraD-Like
2 2 1 0 SCOP 102588 LmbE-like
2 2 2 1 SCOP 52335 Methylglyoxal synthase-like
2 2 2 0 SCOP 55804 Phoshotransferase/anion transport protein
2 2 1 0 SCOP 141130 Acetamidase/Formamidase-like
2 2 1 0 SCOP 69754 Ribosome binding protein Y (YfiA homologue)
2 2 1 0 SCOP 74863 Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha)
2 2 1 1 SCOP 48695 Multiheme cytochromes
2 2 2 0 SCOP 103515 Autotransporter
2 2 1 0 SCOP 103039 CheC-like
2 2 2 1 SCOP 56091 DNA ligase/mRNA capping enzyme, catalytic domain
2 2 2 0 SCOP 158791 MgtE N-terminal domain-like
2 2 2 1 SCOP 55186 ThrRS/AlaRS common domain
2 2 2 0 SCOP 111364 Tsx-like channel
2 2 1 0 SCOP 143865 CorA soluble domain-like
2 2 1 0 SCOP 160113 YegP-like
2 1 1 0 SCOP 52794 PTS system IIB component-like
2 2 1 2 SCOP 51690 Nicotinate/Quinolinate PRTase C-terminal domain-like
2 2 2 0 SCOP 48619 Phospholipase A2, PLA2
2 2 1 0 SCOP 160544 EscU C-terminal domain-like
2 2 1 0 SCOP 56918 Light-harvesting complex subunits
2 2 1 0 SCOP 63848 Cell-division inhibitor MinC, C-terminal domain
2 2 1 0 SCOP 52935 PK C-terminal domain-like
2 1 1 0 SCOP 51971 Nucleotide-binding domain
2 2 2 1 SCOP 55816 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
2 1 1 0 SCOP 53681 Aspartate/glutamate racemase
2 2 2 0 SCOP 56436 C-type lectin-like
2 2 2 1 SCOP 52418 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
2 2 2 1 SCOP 140990 FtsH protease domain-like
2 2 1 1 SCOP 53671 Aspartate/ornithine carbamoyltransferase
2 2 1 0 SCOP 81585 PsbU/PolX domain-like
2 2 2 0 SCOP 81891 Poly A polymerase C-terminal region-like
2 2 1 1 SCOP 56425 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
2 2 2 1 SCOP 101904 GyrA/ParC C-terminal domain-like
2 2 2 1 SCOP 143548 Serine metabolism enzymes domain
2 2 2 0 SCOP 46600 C-terminal UvrC-binding domain of UvrB
2 2 2 0 SCOP 110997 Sporulation related repeat
2 2 1 0 SCOP 144083 Magnesium transport protein CorA, transmembrane region
2 2 2 0 SCOP 47648 Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
2 2 1 0 SCOP 63418 MurE/MurF N-terminal domain
2 2 2 0 SCOP 54768 dsRNA-binding domain-like
2 1 1 0 SCOP 47794 Rad51 N-terminal domain-like
2 2 2 0 SCOP 47831 Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
2 1 1 1 SCOP 56053 Ribosomal protein L6
2 2 1 0 SCOP 52413 UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
2 2 1 1 SCOP 54675 Nicotinate/Quinolinate PRTase N-terminal domain-like
2 2 1 1 SCOP 50615 N-terminal domain of alpha and beta subunits of F1 ATP synthase
2 1 1 1 SCOP 54713 Elongation factor Ts (EF-Ts), dimerisation domain
2 2 1 1 SCOP 47917 C-terminal domain of alpha and beta subunits of F1 ATP synthase
2 2 1 0 SCOP 47005 Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
2 2 2 0 SCOP 143517 TRCF domain-like
2 2 2 0 SCOP 160467 PH0987 N-terminal domain-like
2 2 2 1 SCOP 81767 Pre-protein crosslinking domain of SecA
2 1 1 1 SCOP 55112 Formylmethanofuran:tetrahydromethanopterin formyltransferase
1 1 1 1 SCOP 81338 Aquaporin-like
1 1 1 1 SCOP 74982 Small protein B (SmpB)
1 1 1 1 SCOP 56808 Ribosomal protein L1
1 1 1 1 SCOP 53178 Peptidyl-tRNA hydrolase-like
1 1 1 1 SCOP 47973 Ribosomal protein S7
1 1 1 0 SCOP 46911 Ribosomal protein S18
1 1 1 1 SCOP 142433 CinA-like
1 1 1 0 SCOP 82607 YbaB-like
1 1 1 0 SCOP 64376 YlxR-like
1 1 1 0 SCOP 89919 Ribosome-binding factor A, RbfA
1 1 1 1 SCOP 54999 Ribosomal protein S10
1 1 1 1 SCOP 52166 Ribosomal protein L4
1 1 1 0 SCOP 54189 Ribosomal proteins S24e, L23 and L15e
1 1 1 1 SCOP 54570 Ribosomal protein S19
1 1 1 0 SCOP 54843 Ribosomal protein L22
1 1 1 1 SCOP 54686 Ribosomal protein L16p/L10e
1 1 1 1 SCOP 50193 Ribosomal protein L14
1 1 1 1 SCOP 55282 RL5-like
1 1 1 1 SCOP 56047 Ribosomal protein S8
1 1 1 1 SCOP 52080 Ribosomal proteins L15p and L18e
1 1 1 0 SCOP 103491 Preprotein translocase SecY subunit
1 1 1 0 SCOP 57840 Ribosomal protein L36
1 1 1 1 SCOP 64263 Prokaryotic ribosomal protein L17
1 1 1 0 SCOP 143034 L35p-like
1 1 1 1 SCOP 74731 Ribosomal protein L20
1 1 1 1 SCOP 55831 Thymidylate synthase/dCMP hydroxymethylase
1 1 1 0 SCOP 110324 Ribosomal L27 protein-like
1 1 1 0 SCOP 51695 PLC-like phosphodiesterases
1 1 1 1 SCOP 53748 Phosphoglycerate kinase
1 1 1 1 SCOP 82549 DAK1/DegV-like
1 1 1 1 SCOP 50324 Inorganic pyrophosphatase
1 1 1 0 SCOP 160369 Ribosomal protein L10-like
1 1 1 0 SCOP 46992 Ribosomal protein S20
1 1 1 1 SCOP 52943 ATP synthase (F1-ATPase), gamma subunit
1 1 1 0 SCOP 81333 F1F0 ATP synthase subunit C
1 1 1 1 SCOP 109755 PhoU-like
1 1 1 1 SCOP 52161 Ribosomal protein L13
1 1 1 1 SCOP 47060 S15/NS1 RNA-binding domain
1 1 1 1 SCOP 51351 Triosephosphate isomerase (TIM)
1 1 1 1 SCOP 55194 Ribosome recycling factor, RRF
1 1 1 0 SCOP 54565 Ribosomal protein S16
1 1 1 1 SCOP 69765 IpsF-like
1 1 1 0 SCOP 54611 SecB-like
1 1 1 1 SCOP 103263 Chorismate synthase, AroC
1 1 1 1 SCOP 111337 QueA-like
1 1 1 1 SCOP 51713 tRNA-guanine transglycosylase
1 1 1 0 SCOP 50715 Ribosomal protein L25-like
1 1 1 1 SCOP 56770 HydA/Nqo6-like
1 1 1 1 SCOP 52313 Ribosomal protein S2
1 1 1 0 SCOP 142695 RibA-like
1 1 1 0 SCOP 101908 Putative isomerase YbhE
1 1 1 0 SCOP 55229 Cell division protein MinE topological specificity domain
1 1 1 1 SCOP 52304 Type II 3-dehydroquinate dehydratase
1 1 1 0 SCOP 54060 His-Me finger endonucleases
1 1 1 0 SCOP 64307 SirA-like
1 1 1 0 SCOP 52121 Lumazine synthase
1 1 1 0 SCOP 55129 Ribosomal protein L30p/L7e
1 1 1 0 SCOP 46561 Ribosomal protein L29 (L29p)
1 1 1 1 SCOP 56796 Dehydroquinate synthase-like
1 1 1 0 SCOP 54995 Ribosomal protein S6
1 1 1 1 SCOP 56104 SAICAR synthase-like
1 1 1 0 SCOP 47473 EF-hand
1 1 1 0 SCOP 50978 WD40 repeat-like
1 1 1 1 SCOP 48256 Citrate synthase
1 1 1 1 SCOP 102886 Coproporphyrinogen III oxidase
1 1 1 1 SCOP 51726 UROD/MetE-like
1 1 1 0 SCOP 53590 Nucleoside hydrolase
1 1 1 0 SCOP 48403 Ankyrin repeat
1 1 1 0 SCOP 50630 Acid proteases
1 1 1 0 SCOP 55248 PCD-like
1 1 1 0 SCOP 57868 Metallothionein
1 1 1 1 SCOP 53639 AraD/HMP-PK domain-like
1 1 1 0 SCOP 49329 Cu,Zn superoxide dismutase-like
1 1 1 1 SCOP 54919 Nucleoside diphosphate kinase, NDK
1 1 1 1 SCOP 82282 Homocysteine S-methyltransferase
1 1 1 0 SCOP 49777 PEBP-like
1 1 1 0 SCOP 55257 RBP11-like subunits of RNA polymerase
1 1 1 1 SCOP 64153 YjeF N-terminal domain-like
1 1 1 1 SCOP 56399 ADP-ribosylation
1 1 1 0 SCOP 69618 HemD-like
1 1 1 0 SCOP 52058 L domain-like
1 1 1 1 SCOP 55909 Pentein
1 1 1 0 SCOP 63562 RPB6/omega subunit-like
1 1 1 0 SCOP 53800 Chelatase
1 1 1 1 SCOP 63965 Precorrin-8X methylmutase CbiC/CobH
1 1 1 1 SCOP 141734 HisI-like
1 1 1 1 SCOP 81648 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 0 SCOP 144091 Rhomboid-like
1 1 1 0 SCOP 161084 MAPEG domain-like
1 1 1 0 SCOP 111038 YjbQ-like
1 1 1 1 SCOP 55040 Molybdenum cofactor biosynthesis protein C, MoaC
1 1 1 0 SCOP 69118 AhpD-like
1 1 1 0 SCOP 143243 Nqo5-like
1 1 1 0 SCOP 103642 Sec-C motif
1 1 1 0 SCOP 51998 PFL-like glycyl radical enzymes
1 1 1 0 SCOP 141571 Pentapeptide repeat-like
1 1 1 1 SCOP 64438 CNF1/YfiH-like putative cysteine hydrolases
1 1 1 0 SCOP 118196 YaeB-like
1 1 1 1 SCOP 52255 N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
1 1 1 1 SCOP 142754 NadA-like
1 1 1 0 SCOP 82697 PurS-like
1 1 1 1 SCOP 55083 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
1 1 1 1 SCOP 46767 Methylated DNA-protein cysteine methyltransferase, C-terminal domain
1 1 1 1 SCOP 64167 SurE-like
1 1 1 1 SCOP 63892 Pyridoxine 5'-phosphate synthase
1 1 1 0 SCOP 52507 Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
1 1 1 1 SCOP 54690 Molybdopterin synthase subunit MoaE
1 1 1 0 SCOP 109854 DinB/YfiT-like putative metalloenzymes
1 1 1 0 SCOP 141000 Glu-tRNAGln amidotransferase C subunit
1 1 1 1 SCOP 56762 HydB/Nqo4-like
1 1 1 0 SCOP 116842 XseB-like
1 1 1 1 SCOP 110399 ThiG-like
1 1 1 1 SCOP 111304 Recombination protein RecR
1 1 1 0 SCOP 54786 YcfA/nrd intein domain
1 1 1 0 SCOP 50993 Peptidase/esterase 'gauge' domain
1 1 1 1 SCOP 52733 Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT)
1 1 1 0 SCOP 69065 RNase III domain-like
1 1 1 1 SCOP 55200 Translation initiation factor IF3, C-terminal domain
1 1 1 0 SCOP 159245 AttH-like
1 1 1 0 SCOP 82689 Mechanosensitive channel protein MscS (YggB), C-terminal domain
1 1 1 0 SCOP 160935 VPA0735-like
1 1 1 0 SCOP 82153 FAS1 domain
1 1 1 0 SCOP 158997 Trm112p-like
1 1 1 0 SCOP 158442 DsbB-like
1 1 1 0 SCOP 102829 Cell division protein ZapA-like
1 1 1 1 SCOP 143456 VC0467-like
1 1 1 1 SCOP 144052 Thermophilic metalloprotease-like
1 1 1 0 SCOP 50969 YVTN repeat-like/Quinoprotein amine dehydrogenase
1 1 1 1 SCOP 89028 Cobalamin adenosyltransferase-like
1 1 1 0 SCOP 102400 DNA polymerase III chi subunit
1 1 1 0 SCOP 51004 C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
1 1 1 0 SCOP 81330 Gated mechanosensitive channel
1 1 1 0 SCOP 48600 Chorismate mutase II
1 1 1 0 SCOP 109910 YgfY-like
1 1 1 0 SCOP 89392 Prokaryotic lipoproteins and lipoprotein localization factors
1 1 1 0 SCOP 49472 Transthyretin (synonym: prealbumin)
1 1 1 0 SCOP 110916 Peptidyl-tRNA hydrolase domain-like
1 1 1 1 SCOP 55826 YbaK/ProRS associated domain
1 1 1 0 SCOP 159664 CobE/GbiG C-terminal domain-like
1 1 1 1 SCOP 160909 ATP12-like
1 1 1 1 SCOP 110069 ApaG-like
1 1 1 0 SCOP 159594 XCC0632-like
1 1 1 1 SCOP 140478 LemA-like
1 1 1 1 SCOP 143631 ApbE-like
1 1 1 1 SCOP 101262 Methenyltetrahydrofolate cyclohydrolase-like
1 1 1 0 SCOP 57802 Rubredoxin-like
1 1 1 0 SCOP 50037 C-terminal domain of transcriptional repressors
1 1 1 0 SCOP 117457 FumA C-terminal domain-like
1 1 1 1 SCOP 56507 Methionine synthase activation domain-like
1 1 1 0 SCOP 53182 Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase)
1 1 1 0 SCOP 64288 Chorismate lyase-like
1 1 1 1 SCOP 101473 DhaL-like
1 1 1 0 SCOP 53062 PTS system fructose IIA component-like
1 1 1 0 SCOP 101874 YceI-like
1 1 1 0 SCOP 63817 Sortase
1 1 1 1 SCOP 101738 SspB-like
1 1 1 0 SCOP 69786 YggU-like
1 1 1 1 SCOP 64076 MTH938-like
1 1 1 0 SCOP 143880 NE0471 N-terminal domain-like
1 1 1 0 SCOP 89155 TorD-like
1 1 1 0 SCOP 103247 TT1751-like
1 1 1 1 SCOP 55846 N-acetylmuramoyl-L-alanine amidase-like
1 1 1 1 SCOP 140736 Rv1873-like
1 1 1 0 SCOP 142906 YjbR-like
1 1 1 0 SCOP 82171 DPP6 N-terminal domain-like
1 1 1 0 SCOP 55136 Probable bacterial effector-binding domain
1 1 1 0 SCOP 109709 KorB DNA-binding domain-like
1 1 1 0 SCOP 47592 SWIB/MDM2 domain
1 1 1 0 SCOP 102198 Putative cyclase
1 1 1 0 SCOP 160631 SMI1/KNR4-like
1 1 1 0 SCOP 160975 AF1531-like
1 1 1 1 SCOP 52490 Tubulin nucleotide-binding domain-like
1 1 1 0 SCOP 101756 Hypothetical protein YgiW
1 1 1 0 SCOP 55895 Ribonuclease Rh-like
1 1 1 1 SCOP 69864 Argininosuccinate synthetase, C-terminal domain
1 1 1 1 SCOP 158832 Tex N-terminal region-like
1 1 1 1 SCOP 48592 GroEL equatorial domain-like
1 1 1 1 SCOP 56712 Prokaryotic type I DNA topoisomerase
1 1 1 0 SCOP 52200 Toll/Interleukin receptor TIR domain
1 1 1 1 SCOP 82093 Heme chaperone CcmE
1 1 1 1 SCOP 50729 PH domain-like
1 1 1 0 SCOP 103032 Hypothetical protein YwqG
1 1 1 0 SCOP 160214 FlaG-like
1 1 1 0 SCOP 82114 Riboflavin kinase-like
1 1 1 0 SCOP 46906 Ribosomal protein L11, C-terminal domain
1 1 1 0 SCOP 160443 SMR domain-like
1 1 1 0 SCOP 50789 Herpes virus serine proteinase, assemblin
1 1 1 0 SCOP 69304 Tricorn protease N-terminal domain
1 1 1 0 SCOP 82057 Prokaryotic SH3-related domain
1 1 1 0 SCOP 141255 YccV-like
1 1 1 1 SCOP 158757 SMc04008-like
1 1 1 0 SCOP 81469 Bacterial aa3 type cytochrome c oxidase subunit IV
1 1 1 1 SCOP 158837 AGR C 984p-like
1 1 1 0 SCOP 63825 YWTD domain
1 1 1 1 SCOP 102645 CoaB-like
1 1 1 1 SCOP 117281 Kelch motif
1 1 1 0 SCOP 118352 HSP33 redox switch-like
1 1 1 1 SCOP 54821 Ribosomal protein S3 C-terminal domain
1 1 1 0 SCOP 55234 Cyanase C-terminal domain
1 1 1 0 SCOP 160387 NosL/MerB-like
1 1 1 0 SCOP 109635 DnaK suppressor protein DksA, alpha-hairpin domain
1 1 1 1 SCOP 81935 N-terminal domain of bifunctional PutA protein
1 1 1 0 SCOP 118116 DNA mismatch repair protein MutL
1 1 1 0 SCOP 81336 F1F0 ATP synthase subunit A
1 1 1 1 SCOP 56199 Methenyltetrahydromethanopterin cyclohydrolase
1 1 1 1 SCOP 47789 C-terminal domain of RNA polymerase alpha subunit
1 1 1 0 SCOP 51344 Epsilon subunit of F1F0-ATP synthase N-terminal domain
1 1 1 0 SCOP 52129 Caspase-like
1 1 1 0 SCOP 55658 L9 N-domain-like
1 1 1 1 SCOP 68923 PEP carboxykinase N-terminal domain
1 1 1 0 SCOP 82679 N-utilization substance G protein NusG, N-terminal domain
1 1 1 0 SCOP 55190 Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
1 1 1 0 SCOP 69055 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
1 1 1 1 SCOP 56037 PheT/TilS domain
1 1 1 1 SCOP 48334 DNA repair protein MutS, domain III
1 1 1 0 SCOP 58014 Coiled-coil domain of nucleotide exchange factor GrpE
1 1 1 1 SCOP 55307 Tubulin C-terminal domain-like
1 1 1 0 SCOP 47752 Protein HNS-dependent expression A; HdeA
1 1 1 1 SCOP 57884 Ada DNA repair protein, N-terminal domain (N-Ada 10)
1 1 1 0 SCOP 52964 TolB, N-terminal domain
1 1 1 1 SCOP 54719 Fe,Mn superoxide dismutase (SOD), C-terminal domain
1 1 1 1 SCOP 110111 Ctag/Cox11
1 1 1 1 SCOP 52021 Carbamoyl phosphate synthetase, small subunit N-terminal domain
1 1 1 0 SCOP 54791 Eukaryotic type KH-domain (KH-domain type I)
1 1 1 0 SCOP 49363 Purple acid phosphatase, N-terminal domain
1 1 1 1 SCOP 52029 GroEL apical domain-like
1 1 1 0 SCOP 55060 GHMP Kinase, C-terminal domain
1 1 1 0 SCOP 68912 Rho N-terminal domain-like
1 1 1 0 SCOP 47979 Iron-dependent repressor protein, dimerization domain
1 1 1 1 SCOP 54810 GMP synthetase C-terminal dimerisation domain
1 1 1 0 SCOP 57863 ArfGap/RecO-like zinc finger
1 1 1 1 SCOP 81660 Metal cation-transporting ATPase, ATP-binding domain N
1 1 1 0 SCOP 52279 Beta-D-glucan exohydrolase, C-terminal domain
1 1 1 0 SCOP 47364 Domain of the SRP/SRP receptor G-proteins
1 1 1 0 SCOP 48300 Ribosomal protein L7/12, oligomerisation (N-terminal) domain
1 1 1 0 SCOP 63737 Leukotriene A4 hydrolase N-terminal domain
1 1 1 1 SCOP 100920 Heat shock protein 70kD (HSP70), peptide-binding domain
1 1 1 0 SCOP 46934 UBA-like
1 1 1 1 SCOP 56327 LDH C-terminal domain-like
1 1 1 0 SCOP 110836 Hypothetical protein SAV1430
1 1 1 0 SCOP 110921 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
1 1 1 0 SCOP 47823 lambda integrase-like, N-terminal domain
1 1 1 1 SCOP 51984 MurCD N-terminal domain
1 1 1 1 SCOP 48666 Methanol dehydrogenase subunit
1 1 1 0 SCOP 100879 Lesion bypass DNA polymerase (Y-family), little finger domain
1 1 1 0 SCOP 55945 TATA-box binding protein-like
1 1 1 0 SCOP 52113 BRCT domain
1 1 1 0 SCOP 53155 Methylated DNA-protein cysteine methyltransferase domain
1 1 1 0 SCOP 82861 Mechanosensitive channel protein MscS (YggB), transmembrane region
1 1 1 0 SCOP 74942 YhbC-like, C-terminal domain
1 1 1 0 SCOP 75516 Pheromone-binding domain of LuxR-like quorum-sensing transcription factors
1 1 1 0 SCOP 48435 Bacterial muramidases
1 1 1 0 SCOP 75420 YhbC-like, N-terminal domain
1 1 1 0 SCOP 81624 N-terminal domain of MutM-like DNA repair proteins
1 1 1 0 SCOP 54752 RecA protein, C-terminal domain
1 1 1 1 SCOP 100934 Heat shock protein 70kD (HSP70), C-terminal subdomain
1 1 1 0 SCOP 54782 Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
1 1 1 0 SCOP 102735 Trigger factor ribosome-binding domain
1 1 1 0 SCOP 54680 Pyrimidine nucleoside phosphorylase C-terminal domain
1 1 1 0 SCOP 46557 GreA transcript cleavage protein, N-terminal domain
1 1 1 0 SCOP 69189 Penicillin-binding protein associated domain
1 1 1 1 SCOP 55904 Ornithine decarboxylase C-terminal domain
1 1 1 0 SCOP 47807 5' to 3' exonuclease, C-terminal subdomain
1 1 1 1 SCOP 47446 Signal peptide-binding domain
1 1 1 1 SCOP 64397 Hsp33 domain
1 1 1 0 SCOP 54991 Anticodon-binding domain of PheRS
1 1 1 1 SCOP 55271 DNA repair protein MutS, domain I
1 1 1 0 SCOP 47928 N-terminal domain of the delta subunit of the F1F0-ATP synthase
1 1 1 1 SCOP 48108 Carbamoyl phosphate synthetase, large subunit connection domain
1 1 1 1 SCOP 82051 Obg GTP-binding protein N-terminal domain
1 1 1 0 SCOP 143724 PHP14-like
1 1 1 0 SCOP 55261 GAD domain-like
1 1 1 0 SCOP 110942 HSP90 C-terminal domain
1 1 1 1 SCOP 54747 Ribosomal L11/L12e N-terminal domain
1 1 1 1 SCOP 46609 Fe,Mn superoxide dismutase (SOD), N-terminal domain
1 1 1 0 SCOP 75615 Siroheme synthase middle domains-like
1 1 1 1 SCOP 81886 Helical scaffold and wing domains of SecA
1 1 1 0 SCOP 54849 GroEL-intermediate domain like
1 1 1 0 SCOP 56194 Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
1 1 1 0 SCOP 52156 Initiation factor IF2/eIF5b, domain 3
1 1 1 0 SCOP 116878 TrmE connector domain
1 1 1 0 SCOP 51064 Head domain of nucleotide exchange factor GrpE
1 1 1 0 SCOP 55653 Ribosomal protein L9 C-domain
1 1 1 0 SCOP 75445 D-ribose-5-phosphate isomerase (RpiA), lid domain
1 1 1 1 SCOP 101353 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
1 1 1 1 SCOP 56553 Insert subdomain of RNA polymerase alpha subunit
1 1 1 0 SCOP 63433 Fumarylacetoacetate hydrolase, FAH, N-terminal domain
1 1 1 1 SCOP 47644 Methionine synthase domain
1 1 1 0 SCOP 46929 DNA helicase RuvA subunit, C-terminal domain
1 1 1 0 SCOP 54364 Translation initiation factor IF3, N-terminal domain
1 1 1 0 SCOP 69705 Transcription factor NusA, N-terminal domain
1 1 1 0 SCOP 53150 DNA repair protein MutS, domain II
1 1 1 0 SCOP 140356 PPK N-terminal domain-like
1 1 1 0 SCOP 56519 Penicillin binding protein dimerisation domain
1 1 1 0 SCOP 81799 Putative methyltransferase TM0872, insert domain
1 1 1 0 SCOP 55869 DNA topoisomerase I domain
1 1 1 0 SCOP 143856 DeoB insert domain-like
1 1 1 0 SCOP 160996 HI0933 insert domain-like
1 1 1 0 SCOP 81490 Photosystem II reaction centre subunit H, transmembrane region

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The following superfamilies have one or more weak hits:

SCOP superfamily Myosin rod fragments
SCOP superfamily Soluble domain of poliovirus core protein 3a
SCOP superfamily Positive stranded ssRNA viruses
SCOP superfamily Tumor suppressor gene product Apc
SCOP superfamily MesJ substrate recognition domain-like
SCOP superfamily beta-sandwich domain of Sec23/24
SCOP superfamily Family 10 polysaccharide lyase
SCOP superfamily Family A G protein-coupled receptor-like
SCOP superfamily Rad50 coiled-coil Zn hook
SCOP superfamily Mitotic arrest deficient-like 1, Mad1
SCOP superfamily Plakin repeat
SCOP superfamily HprK N-terminal domain-like
SCOP superfamily Arabinanase/levansucrase/invertase
SCOP superfamily Variable surface antigen VlsE
SCOP superfamily Phage fibre proteins
SCOP superfamily Phage tail proteins
SCOP superfamily SAP domain
SCOP superfamily F1 ATPase inhibitor, IF1, C-terminal domain
SCOP superfamily Photosystem I subunit PsaD
SCOP superfamily Head-to-tail joining protein W, gpW
SCOP superfamily 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain
SCOP superfamily RNA polymerase subunits
SCOP superfamily Multimerization domain of the phosphoprotein from sendai virus
SCOP superfamily Delta-sleep-inducing peptide immunoreactive peptide
SCOP superfamily Tropomyosin
SCOP superfamily Cysteine-rich domain
SCOP superfamily TNF receptor-like
SCOP superfamily Plant lectins/antimicrobial peptides
SCOP superfamily Aldehyde ferredoxin oxidoreductase, N-terminal domain
SCOP superfamily Formiminotransferase domain of formiminotransferase-cyclodeaminase.
SCOP superfamily Heme-binding protein A (HasA)
SCOP superfamily UBC-like
SCOP superfamily Amine oxidase N-terminal region
SCOP superfamily DNA-binding domain
SCOP superfamily LysM domain
SCOP superfamily Regulatory protein AraC
SCOP superfamily Carboxypeptidase regulatory domain-like
SCOP superfamily Invasin/intimin cell-adhesion fragments
SCOP superfamily Superoxide reductase-like
SCOP superfamily 14-3-3 protein
SCOP superfamily Insect pheromone/odorant-binding proteins
SCOP superfamily alpha-catenin/vinculin-like
SCOP superfamily TMV-like viral coat proteins
SCOP superfamily Apolipoprotein
SCOP superfamily HMG-box
SCOP superfamily Acyl-CoA binding protein
SCOP superfamily PspA lactotransferrin-binding region
SCOP superfamily CHY zinc finger-like
SCOP superfamily MgtE membrane domain-like
SCOP superfamily SNF-like
SCOP superfamily ATP synthase D chain-like
SCOP superfamily Jann2411-like
SCOP superfamily V-type ATPase subunit E-like
SCOP superfamily BRK domain-like
SCOP superfamily BLRF2-like
SCOP superfamily EspE N-terminal domain-like
SCOP superfamily YdgH-like
SCOP superfamily CdCA1 repeat-like
SCOP superfamily Dhaf3308-like
SCOP superfamily Lipase chaperone-like
SCOP superfamily PRP4-like
SCOP superfamily Sec2 N-terminal region
SCOP superfamily Heme iron utilization protein-like
SCOP superfamily YgbK-like
SCOP superfamily NfeD domain-like
SCOP superfamily FlgN-like
SCOP superfamily PE/PPE dimer-like
SCOP superfamily EsxAB dimer-like
SCOP superfamily Synuclein
SCOP superfamily Rap/Ran-GAP
SCOP superfamily TTHA0583/YokD-like
SCOP superfamily Oligoxyloglucan reducing end-specific cellobiohydrolase
SCOP superfamily I/LWEQ domain
SCOP superfamily Respiratory nitrate reductase 1 gamma chain
SCOP superfamily Preprotein translocase SecE subunit
SCOP superfamily Roadblock/LC7 domain
SCOP superfamily Rof/RNase P subunit-like

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