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Helicobacter felis ATCC 49179 superfamily assignments

Taxonomy
Taxonomy browser entry

Bacteria; Proteobacteria; delta/epsilon subdivisions; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Helicobacter; Helicobacter felis; Helicobacter felis ATCC 49179

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Fasta format sequences
Domain assignments


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Assignment statistics

Sequences: 1653 total
1011 (61 %) with assignment
308 average length
57 % amino acid coverage
Domains: 1473 total
513 unique superfamilies
304 unique families
287 average length
2.9 average superfamily size
65 % formed by duplication
Domain combinations: 269 domain pairs
631 unique architectures

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Superfamily assignments

Domains

Proteins

Architectures

Families

SCOP link

Superfamilies

113 100 40 7 SCOP 52540 P-loop containing nucleoside triphosphate hydrolases
48 27 10 1 SCOP 81901 HCP-like
34 34 8 1 SCOP 53335 S-adenosyl-L-methionine-dependent methyltransferases
32 32 16 6 SCOP 51735 NAD(P)-binding Rossmann-fold domains
26 26 6 1 SCOP 58104 Methyl-accepting chemotaxis protein (MCP) signaling domain
22 16 13 2 SCOP 50249 Nucleic acid-binding proteins
19 11 6 5 SCOP 53067 Actin-like ATPase domain
16 14 11 5 SCOP 54211 Ribosomal protein S5 domain 2-like
15 15 11 3 SCOP 52374 Nucleotidylyl transferase
15 15 1 2 SCOP 53756 UDP-Glycosyltransferase/glycogen phosphorylase
14 14 1 4 SCOP 53383 PLP-dependent transferases
14 14 2 3 SCOP 102114 Radical SAM enzymes
11 11 5 2 SCOP 53448 Nucleotide-diphospho-sugar transferases
11 11 9 1 SCOP 55681 Class II aaRS and biotin synthetases
11 7 5 1 SCOP 46626 Cytochrome c
10 9 6 1 SCOP 56059 Glutathione synthetase ATP-binding domain-like
10 10 7 1 SCOP 51905 FAD/NAD(P)-binding domain
10 10 5 0 SCOP 46785 "Winged helix" DNA-binding domain
10 7 5 4 SCOP 52518 Thiamin diphosphate-binding fold (THDP-binding)
10 9 8 2 SCOP 50447 Translation proteins
10 10 6 1 SCOP 52172 CheY-like
10 7 4 1 SCOP 116734 DNA methylase specificity domain
9 9 3 6 SCOP 51569 Aldolase
9 9 2 0 SCOP 161098 MetI-like
9 9 3 1 SCOP 52402 Adenine nucleotide alpha hydrolases-like
9 6 6 0 SCOP 48452 TPR-like
8 8 5 1 SCOP 56784 HAD-like
8 8 3 1 SCOP 53850 Periplasmic binding protein-like II
8 8 4 0 SCOP 54862 4Fe-4S ferredoxins
8 5 3 1 SCOP 82866 Multidrug efflux transporter AcrB transmembrane domain
8 7 4 1 SCOP 52440 PreATP-grasp domain
7 7 3 2 SCOP 53271 PRTase-like
7 7 2 1 SCOP 52833 Thioredoxin-like
7 7 3 1 SCOP 53649 Alkaline phosphatase-like
7 3 2 0 SCOP 82693 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
6 6 4 3 SCOP 51556 Metallo-dependent hydrolases
6 6 5 2 SCOP 52317 Class I glutamine amidotransferase-like
6 5 2 3 SCOP 51366 Ribulose-phoshate binding barrel
6 6 4 3 SCOP 55120 Pseudouridine synthase
6 6 2 2 SCOP 100950 NagB/RpiA/CoA transferase-like
6 6 2 1 SCOP 53098 Ribonuclease H-like
6 6 4 1 SCOP 55174 Alpha-L RNA-binding motif
6 6 1 1 SCOP 54637 Thioesterase/thiol ester dehydrase-isomerase
6 6 5 3 SCOP 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
6 4 3 1 SCOP 51338 Composite domain of metallo-dependent hydrolases
6 4 3 0 SCOP 55785 PYP-like sensor domain (PAS domain)
6 4 3 1 SCOP 56024 Phospholipase D/nuclease
6 6 6 1 SCOP 47323 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
6 3 2 1 SCOP 54980 EF-G C-terminal domain-like
6 6 3 2 SCOP 55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
6 5 2 1 SCOP 56042 PurM C-terminal domain-like
6 5 2 1 SCOP 55326 PurM N-terminal domain-like
6 2 1 0 SCOP 53738 Phosphoglucomutase, first 3 domains
6 3 2 0 SCOP 82714 Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
5 5 4 1 SCOP 50104 Translation proteins SH3-like domain
5 5 2 0 SCOP 103473 MFS general substrate transporter
5 5 4 2 SCOP 51161 Trimeric LpxA-like enzymes
5 5 3 0 SCOP 51261 Duplicated hybrid motif
5 5 2 3 SCOP 52096 ClpP/crotonase
5 4 3 0 SCOP 117143 Flagellar hook protein flgE
5 5 4 1 SCOP 51419 PLP-binding barrel
5 5 4 2 SCOP 53187 Zn-dependent exopeptidases
5 5 3 1 SCOP 50341 CheW-like
5 3 2 1 SCOP 63411 LuxS/MPP-like metallohydrolase
5 3 2 2 SCOP 53901 Thiolase-like
5 5 5 1 SCOP 46548 alpha-helical ferredoxin
5 5 3 0 SCOP 53244 MurD-like peptide ligases, peptide-binding domain
5 4 3 0 SCOP 50156 PDZ domain-like
5 5 3 0 SCOP 53623 MurD-like peptide ligases, catalytic domain
4 4 3 3 SCOP 53697 SIS domain
4 4 2 4 SCOP 53659 Isocitrate/Isopropylmalate dehydrogenase-like
4 4 3 1 SCOP 75217 alpha/beta knot
4 3 3 0 SCOP 52980 Restriction endonuclease-like
4 4 3 0 SCOP 109998 Triger factor/SurA peptide-binding domain-like
4 4 2 1 SCOP 53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes
4 4 3 3 SCOP 51621 Phosphoenolpyruvate/pyruvate domain
4 4 3 1 SCOP 64518 Phase 1 flagellin
4 4 4 3 SCOP 56235 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
4 4 4 1 SCOP 109604 HD-domain/PDEase-like
4 4 4 0 SCOP 54534 FKBP-like
4 4 3 0 SCOP 56317 Carbon-nitrogen hydrolase
4 4 4 0 SCOP 55008 HMA, heavy metal-associated domain
4 4 2 1 SCOP 55620 Tetrahydrobiopterin biosynthesis enzymes-like
4 2 2 0 SCOP 57783 Zinc beta-ribbon
4 4 1 0 SCOP 56954 Outer membrane efflux proteins (OEP)
4 4 2 0 SCOP 158682 TerB-like
4 2 2 0 SCOP 103481 Multidrug resistance efflux transporter EmrE
4 2 2 0 SCOP 88659 Sigma3 and sigma4 domains of RNA polymerase sigma factors
4 4 2 1 SCOP 159594 XCC0632-like
4 3 3 1 SCOP 54814 Prokaryotic type KH domain (KH-domain type II)
4 3 3 0 SCOP 55021 ACT-like
4 4 2 1 SCOP 48179 6-phosphogluconate dehydrogenase C-terminal domain-like
4 4 4 1 SCOP 53706 Formate dehydrogenase/DMSO reductase, domains 1-3
4 4 1 1 SCOP 51246 Rudiment single hybrid motif
4 4 4 0 SCOP 56176 FAD-binding/transporter-associated domain-like
4 4 3 0 SCOP 103190 Sensory domain-like
4 4 3 0 SCOP 47384 Homodimeric domain of signal transducing histidine kinase
4 4 3 0 SCOP 52922 TK C-terminal domain-like
4 4 3 1 SCOP 50621 Alanine racemase C-terminal domain-like
4 2 2 0 SCOP 49493 HSP40/DnaJ peptide-binding domain
3 3 1 0 SCOP 53474 alpha/beta-Hydrolases
3 3 1 2 SCOP 47240 Ferritin-like
3 3 1 1 SCOP 52218 Flavoproteins
3 3 1 0 SCOP 47336 ACP-like
3 3 2 1 SCOP 50129 GroES-like
3 3 1 1 SCOP 48557 L-aspartase-like
3 3 3 1 SCOP 55821 YrdC/RibB
3 3 2 2 SCOP 48150 DNA-glycosylase
3 3 2 0 SCOP 55811 Nudix
3 3 3 0 SCOP 56281 Metallo-hydrolase/oxidoreductase
3 3 2 1 SCOP 56935 Porins
3 3 2 0 SCOP 50182 Sm-like ribonucleoproteins
3 2 2 1 SCOP 55729 Acyl-CoA N-acyltransferases (Nat)
3 3 3 1 SCOP 50891 Cyclophilin-like
3 3 1 0 SCOP 48317 Acid phosphatase/Vanadium-dependent haloperoxidase
3 3 2 0 SCOP 52283 Formate/glycerate dehydrogenase catalytic domain-like
3 3 3 1 SCOP 81342 Transmembrane di-heme cytochromes
3 3 3 0 SCOP 52954 Class II aaRS ABD-related
3 3 2 0 SCOP 56601 beta-lactamase/transpeptidase-like
3 3 3 0 SCOP 46955 Putative DNA-binding domain
3 3 3 0 SCOP 117916 Fe-S cluster assembly (FSCA) domain-like
3 3 3 2 SCOP 81301 Nucleotidyltransferase
3 3 3 2 SCOP 50692 ADC-like
3 3 3 1 SCOP 53955 Lysozyme-like
3 3 1 0 SCOP 111369 HlyD-like secretion proteins
3 3 3 0 SCOP 101801 Surface presentation of antigens (SPOA)
3 3 2 0 SCOP 53041 Resolvase-like
3 3 2 0 SCOP 48695 Multiheme cytochromes
3 3 3 0 SCOP 46565 Chaperone J-domain
3 3 2 1 SCOP 90123 ABC transporter transmembrane region
3 3 2 0 SCOP 46589 tRNA-binding arm
3 1 1 0 SCOP 55979 DNA clamp
3 3 2 1 SCOP 48230 Chondroitin AC/alginate lyase
3 1 1 1 SCOP 55973 S-adenosylmethionine synthetase
3 3 3 0 SCOP 81665 Calcium ATPase, transmembrane domain M
3 3 3 0 SCOP 116726 TrkA C-terminal domain-like
3 3 2 1 SCOP 102414 Alpha-2,3/8-sialyltransferase CstII
3 3 3 1 SCOP 50677 ValRS/IleRS/LeuRS editing domain
3 3 3 0 SCOP 81653 Calcium ATPase, transduction domain A
2 2 1 1 SCOP 53167 Purine and uridine phosphorylases
2 2 2 1 SCOP 53927 Cytidine deaminase-like
2 2 1 0 SCOP 57829 Zn-binding ribosomal proteins
2 2 2 0 SCOP 53613 Ribokinase-like
2 2 1 0 SCOP 54197 HIT-like
2 2 1 1 SCOP 53137 Translational machinery components
2 2 2 1 SCOP 55920 Creatinase/aminopeptidase
2 2 2 0 SCOP 64182 DHH phosphoesterases
2 2 2 0 SCOP 56300 Metallo-dependent phosphatases
2 2 1 0 SCOP 143800 L28p-like
2 2 1 1 SCOP 75620 Release factor
2 2 2 0 SCOP 55486 Metalloproteases ("zincins"), catalytic domain
2 2 2 1 SCOP 53633 Carbamate kinase-like
2 1 1 2 SCOP 64484 beta and beta-prime subunits of DNA dependent RNA-polymerase
2 2 2 1 SCOP 53720 ALDH-like
2 2 1 1 SCOP 51283 dUTPase-like
2 2 2 2 SCOP 56770 HydA/Nqo6-like
2 2 2 1 SCOP 54292 2Fe-2S ferredoxin-like
2 2 2 1 SCOP 51412 Inosine monophosphate dehydrogenase (IMPDH)
2 2 1 0 SCOP 54285 MoaD/ThiS
2 2 2 1 SCOP 142695 RibA-like
2 2 1 1 SCOP 55205 EPT/RTPC-like
2 2 1 1 SCOP 51395 FMN-linked oxidoreductases
2 2 1 1 SCOP 48576 Terpenoid synthases
2 2 2 1 SCOP 50475 FMN-binding split barrel
2 2 1 1 SCOP 48256 Citrate synthase
2 2 1 1 SCOP 56634 Heme-dependent catalase-like
2 2 2 1 SCOP 53328 Formyltransferase
2 2 2 0 SCOP 54427 NTF2-like
2 2 2 1 SCOP 56322 ADC synthase
2 2 2 0 SCOP 54001 Cysteine proteinases
2 1 1 0 SCOP 54506 Diaminopimelate epimerase-like
2 2 2 1 SCOP 56752 D-aminoacid aminotransferase-like PLP-dependent enzymes
2 1 1 0 SCOP 57997 Tropomyosin
2 2 2 0 SCOP 51306 LexA/Signal peptidase
2 2 2 1 SCOP 51182 RmlC-like cupins
2 2 1 1 SCOP 51197 Clavaminate synthase-like
2 2 2 2 SCOP 55931 Glutamine synthetase/guanido kinase
2 2 2 1 SCOP 54631 CBS-domain pair
2 2 2 0 SCOP 47598 Ribbon-helix-helix
2 2 2 2 SCOP 52016 LeuD/IlvD-like
2 2 1 0 SCOP 55331 Tautomerase/MIF
2 2 2 0 SCOP 47413 lambda repressor-like DNA-binding domains
2 2 2 0 SCOP 51230 Single hybrid motif
2 2 2 1 SCOP 88946 Sigma2 domain of RNA polymerase sigma factors
2 2 2 0 SCOP 53300 vWA-like
2 2 2 1 SCOP 52507 Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
2 2 2 2 SCOP 56762 HydB/Nqo4-like
2 2 2 1 SCOP 53218 Molybdenum cofactor biosynthesis proteins
2 2 1 0 SCOP 46894 C-terminal effector domain of the bipartite response regulators
2 2 1 1 SCOP 54111 Urease, gamma-subunit
2 2 1 1 SCOP 51278 Urease, beta-subunit
2 2 1 1 SCOP 51391 Thiamin phosphate synthase
2 2 1 0 SCOP 103088 OmpA-like
2 2 2 0 SCOP 140931 Fic-like
2 2 1 0 SCOP 53323 Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
2 2 1 1 SCOP 161070 SNF-like
2 2 1 0 SCOP 141457 BH3618-like
2 2 1 1 SCOP 101874 YceI-like
2 2 2 1 SCOP 51604 Enolase C-terminal domain-like
2 2 1 1 SCOP 55846 N-acetylmuramoyl-L-alanine amidase-like
2 2 2 0 SCOP 47781 RuvA domain 2-like
2 2 2 0 SCOP 103039 CheC-like
2 2 1 0 SCOP 74653 TolA/TonB C-terminal domain
2 2 2 1 SCOP 55186 ThrRS/AlaRS common domain
2 2 2 0 SCOP 55103 FAD-linked oxidases, C-terminal domain
2 2 1 0 SCOP 81923 Double Clp-N motif
2 2 1 0 SCOP 53223 Aminoacid dehydrogenase-like, N-terminal domain
2 2 2 0 SCOP 160544 EscU C-terminal domain-like
2 2 2 1 SCOP 56719 Type II DNA topoisomerase
2 1 1 0 SCOP 49265 Fibronectin type III
2 1 1 1 SCOP 53681 Aspartate/glutamate racemase
2 1 1 1 SCOP 48029 FliG
2 2 1 1 SCOP 140990 FtsH protease domain-like
2 2 1 0 SCOP 48163 An anticodon-binding domain of class I aminoacyl-tRNA synthetases
2 1 1 0 SCOP 143968 UbiD C-terminal domain-like
2 2 2 0 SCOP 54791 Eukaryotic type KH-domain (KH-domain type I)
2 2 1 0 SCOP 55060 GHMP Kinase, C-terminal domain
2 2 2 1 SCOP 143548 Serine metabolism enzymes domain
2 1 1 0 SCOP 63380 Riboflavin synthase domain-like
2 2 2 0 SCOP 46600 C-terminal UvrC-binding domain of UvrB
2 2 2 0 SCOP 110997 Sporulation related repeat
2 2 2 0 SCOP 54768 dsRNA-binding domain-like
2 2 2 0 SCOP 54373 FAD-linked reductases, C-terminal domain
2 1 1 1 SCOP 56053 Ribosomal protein L6
2 2 1 0 SCOP 55957 Phosphoglucomutase, C-terminal domain
2 2 1 0 SCOP 55031 Bacterial exopeptidase dimerisation domain
2 2 1 0 SCOP 50615 N-terminal domain of alpha and beta subunits of F1 ATP synthase
2 2 2 1 SCOP 81271 TGS-like
2 2 2 0 SCOP 101447 Formin homology 2 domain (FH2 domain)
2 2 1 0 SCOP 51269 AFP III-like domain
2 1 1 0 SCOP 55666 Ribonuclease PH domain 2-like
2 2 1 1 SCOP 47917 C-terminal domain of alpha and beta subunits of F1 ATP synthase
2 2 1 0 SCOP 56519 Penicillin binding protein dimerisation domain
1 1 1 1 SCOP 56731 DNA primase core
1 1 1 0 SCOP 48013 NusB-like
1 1 1 1 SCOP 81338 Aquaporin-like
1 1 1 0 SCOP 53790 Tetrapyrrole methylase
1 1 1 1 SCOP 74982 Small protein B (SmpB)
1 1 1 1 SCOP 56808 Ribosomal protein L1
1 1 1 1 SCOP 53178 Peptidyl-tRNA hydrolase-like
1 1 1 1 SCOP 47973 Ribosomal protein S7
1 1 1 0 SCOP 46911 Ribosomal protein S18
1 1 1 1 SCOP 52141 Uracil-DNA glycosylase-like
1 1 1 1 SCOP 75304 Amidase signature (AS) enzymes
1 1 1 1 SCOP 56420 Peptide deformylase
1 1 1 0 SCOP 81606 PP2C-like
1 1 1 0 SCOP 56112 Protein kinase-like (PK-like)
1 1 1 0 SCOP 111331 NAD kinase/diacylglycerol kinase-like
1 1 1 0 SCOP 82607 YbaB-like
1 1 1 0 SCOP 64376 YlxR-like
1 1 1 0 SCOP 89919 Ribosome-binding factor A, RbfA
1 1 1 1 SCOP 54999 Ribosomal protein S10
1 1 1 1 SCOP 52166 Ribosomal protein L4
1 1 1 0 SCOP 54189 Ribosomal proteins S24e, L23 and L15e
1 1 1 1 SCOP 54570 Ribosomal protein S19
1 1 1 0 SCOP 54843 Ribosomal protein L22
1 1 1 1 SCOP 54686 Ribosomal protein L16p/L10e
1 1 1 1 SCOP 50193 Ribosomal protein L14
1 1 1 1 SCOP 55282 RL5-like
1 1 1 1 SCOP 56047 Ribosomal protein S8
1 1 1 0 SCOP 52080 Ribosomal proteins L15p and L18e
1 1 1 0 SCOP 103491 Preprotein translocase SecY subunit
1 1 1 0 SCOP 57840 Ribosomal protein L36
1 1 1 1 SCOP 46946 S13-like H2TH domain
1 1 1 0 SCOP 64263 Prokaryotic ribosomal protein L17
1 1 1 0 SCOP 143034 L35p-like
1 1 1 1 SCOP 74731 Ribosomal protein L20
1 1 1 0 SCOP 56214 4'-phosphopantetheinyl transferase
1 1 1 0 SCOP 69593 Glycerol-3-phosphate (1)-acyltransferase
1 1 1 0 SCOP 53597 Dihydrofolate reductase-like
1 1 1 0 SCOP 141091 L21p-like
1 1 1 0 SCOP 110324 Ribosomal L27 protein-like
1 1 1 1 SCOP 53748 Phosphoglycerate kinase
1 1 1 1 SCOP 75625 YebC-like
1 1 1 0 SCOP 82649 SufE/NifU
1 1 1 1 SCOP 50324 Inorganic pyrophosphatase
1 1 1 0 SCOP 47729 IHF-like DNA-binding proteins
1 1 1 0 SCOP 160369 Ribosomal protein L10-like
1 1 1 0 SCOP 46992 Ribosomal protein S20
1 1 1 1 SCOP 89623 Ribose/Galactose isomerase RpiB/AlsB
1 1 1 1 SCOP 52943 ATP synthase (F1-ATPase), gamma subunit
1 1 1 0 SCOP 81333 F1F0 ATP synthase subunit C
1 1 1 1 SCOP 55068 Peptide methionine sulfoxide reductase
1 1 1 1 SCOP 52161 Ribosomal protein L13
1 1 1 0 SCOP 47060 S15/NS1 RNA-binding domain
1 1 1 1 SCOP 51351 Triosephosphate isomerase (TIM)
1 1 1 1 SCOP 55194 Ribosome recycling factor, RRF
1 1 1 0 SCOP 54565 Ribosomal protein S16
1 1 1 1 SCOP 51316 Mss4-like
1 1 1 1 SCOP 69765 IpsF-like
1 1 1 0 SCOP 51730 FAD-linked oxidoreductase
1 1 1 0 SCOP 52821 Rhodanese/Cell cycle control phosphatase
1 1 1 1 SCOP 103263 Chorismate synthase, AroC
1 1 1 1 SCOP 111337 QueA-like
1 1 1 1 SCOP 51713 tRNA-guanine transglycosylase
1 1 1 0 SCOP 50715 Ribosomal protein L25-like
1 1 1 1 SCOP 52313 Ribosomal protein S2
1 1 1 1 SCOP 64005 Undecaprenyl diphosphate synthase
1 1 1 1 SCOP 56655 Carbohydrate phosphatase
1 1 1 0 SCOP 102705 NIF3 (NGG1p interacting factor 3)-like
1 1 1 0 SCOP 55229 Cell division protein MinE topological specificity domain
1 1 1 1 SCOP 55298 YjgF-like
1 1 1 1 SCOP 52304 Type II 3-dehydroquinate dehydratase
1 1 1 0 SCOP 117130 CsrA-like
1 1 1 0 SCOP 54060 His-Me finger endonucleases
1 1 1 0 SCOP 50685 Barwin-like endoglucanases
1 1 1 1 SCOP 52121 Lumazine synthase
1 1 1 0 SCOP 46561 Ribosomal protein L29 (L29p)
1 1 1 0 SCOP 75169 DsrEFH-like
1 1 1 1 SCOP 56796 Dehydroquinate synthase-like
1 1 1 0 SCOP 54995 Ribosomal protein S6
1 1 1 1 SCOP 56104 SAICAR synthase-like
1 1 1 0 SCOP 52949 Macro domain-like
1 1 1 0 SCOP 55315 L30e-like
1 1 1 0 SCOP 55469 FMN-dependent nitroreductase-like
1 1 1 1 SCOP 56672 DNA/RNA polymerases
1 1 1 0 SCOP 47226 Histidine-containing phosphotransfer domain, HPT domain
1 1 1 1 SCOP 51726 UROD/MetE-like
1 1 1 0 SCOP 88723 PIN domain-like
1 1 1 0 SCOP 52499 Isochorismatase-like hydrolases
1 1 1 0 SCOP 69572 Activating enzymes of the ubiquitin-like proteins
1 1 1 1 SCOP 53774 Glutaminase/Asparaginase
1 1 1 1 SCOP 74650 Galactose mutarotase-like
1 1 1 0 SCOP 54928 RNA-binding domain, RBD
1 1 1 0 SCOP 53639 AraD/HMP-PK domain-like
1 1 1 0 SCOP 52972 ITPase-like
1 1 1 1 SCOP 54919 Nucleoside diphosphate kinase, NDK
1 1 1 1 SCOP 81343 Fumarate reductase respiratory complex transmembrane subunits
1 1 1 0 SCOP 49777 PEBP-like
1 1 1 1 SCOP 88713 Glycoside hydrolase/deacetylase
1 1 1 0 SCOP 55257 RBP11-like subunits of RNA polymerase
1 1 1 1 SCOP 64153 YjeF N-terminal domain-like
1 1 1 0 SCOP 52151 FabD/lysophospholipase-like
1 1 1 0 SCOP 69618 HemD-like
1 1 1 1 SCOP 52768 Arginase/deacetylase
1 1 1 1 SCOP 103378 2-methylcitrate dehydratase PrpD
1 1 1 1 SCOP 55909 Pentein
1 1 1 0 SCOP 52788 Phosphotyrosine protein phosphatases I
1 1 1 0 SCOP 63562 RPB6/omega subunit-like
1 1 1 0 SCOP 81442 Cytochrome c oxidase subunit I-like
1 1 1 1 SCOP 53800 Chelatase
1 1 1 0 SCOP 81648 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 1 SCOP 51069 Carbonic anhydrase
1 1 1 1 SCOP 55040 Molybdenum cofactor biosynthesis protein C, MoaC
1 1 1 0 SCOP 102405 MCP/YpsA-like
1 1 1 0 SCOP 143243 Nqo5-like
1 1 1 0 SCOP 81324 Voltage-gated potassium channels
1 1 1 1 SCOP 51717 Dihydropteroate synthetase-like
1 1 1 1 SCOP 51998 PFL-like glycyl radical enzymes
1 1 1 1 SCOP 50494 Trypsin-like serine proteases
1 1 1 1 SCOP 52255 N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
1 1 1 0 SCOP 143011 RelE-like
1 1 1 1 SCOP 142754 NadA-like
1 1 1 0 SCOP 143100 TTHA1013/TTHA0281-like
1 1 1 0 SCOP 82771 GIY-YIG endonuclease
1 1 1 0 SCOP 50022 ISP domain
1 1 1 0 SCOP 55083 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
1 1 1 0 SCOP 46767 Methylated DNA-protein cysteine methyltransferase, C-terminal domain
1 1 1 0 SCOP 89550 PHP domain-like
1 1 1 1 SCOP 64167 SurE-like
1 1 1 1 SCOP 63892 Pyridoxine 5'-phosphate synthase
1 1 1 0 SCOP 54690 Molybdopterin synthase subunit MoaE
1 1 1 0 SCOP 141000 Glu-tRNAGln amidotransferase C subunit
1 1 1 1 SCOP 110399 ThiG-like
1 1 1 0 SCOP 52467 DHS-like NAD/FAD-binding domain
1 1 1 0 SCOP 54736 ClpS-like
1 1 1 0 SCOP 53822 Periplasmic binding protein-like I
1 1 1 0 SCOP 69796 Thymidylate synthase-complementing protein Thy1
1 1 1 1 SCOP 53732 Aconitase iron-sulfur domain
1 1 1 0 SCOP 69065 RNase III domain-like
1 1 1 1 SCOP 56219 DNase I-like
1 1 1 0 SCOP 55200 Translation initiation factor IF3, C-terminal domain
1 1 1 0 SCOP 82689 Mechanosensitive channel protein MscS (YggB), C-terminal domain
1 1 1 0 SCOP 54975 Acylphosphatase/BLUF domain-like
1 1 1 0 SCOP 158442 DsbB-like
1 1 1 0 SCOP 50998 Quinoprotein alcohol dehydrogenase-like
1 1 1 0 SCOP 88697 PUA domain-like
1 1 1 0 SCOP 89095 GatB/YqeY motif
1 1 1 0 SCOP 48600 Chorismate mutase II
1 1 1 0 SCOP 89392 Prokaryotic lipoproteins and lipoprotein localization factors
1 1 1 0 SCOP 101307 YutG-like
1 1 1 0 SCOP 55826 YbaK/ProRS associated domain
1 1 1 0 SCOP 103025 Folate-binding domain
1 1 1 1 SCOP 56747 Prim-pol domain
1 1 1 0 SCOP 52335 Methylglyoxal synthase-like
1 1 1 0 SCOP 48295 TrpR-like
1 1 1 0 SCOP 50037 C-terminal domain of transcriptional repressors
1 1 1 0 SCOP 101116 Flagellar export chaperone FliS
1 1 1 0 SCOP 50486 FMT C-terminal domain-like
1 1 1 0 SCOP 56925 OMPA-like
1 1 1 0 SCOP 53163 HybD-like
1 1 1 0 SCOP 159127 HupF/HypC-like
1 1 1 0 SCOP 89155 TorD-like
1 1 1 0 SCOP 161266 Gam-like
1 1 1 0 SCOP 50939 Sialidases
1 1 1 0 SCOP 101498 Anti-sigma factor FlgM
1 1 1 0 SCOP 103515 Autotransporter
1 1 1 1 SCOP 56091 DNA ligase/mRNA capping enzyme, catalytic domain
1 1 1 0 SCOP 75708 Chemotaxis phosphatase CheZ
1 1 1 0 SCOP 158791 MgtE N-terminal domain-like
1 1 1 0 SCOP 160631 SMI1/KNR4-like
1 1 1 0 SCOP 50346 PRC-barrel domain
1 1 1 1 SCOP 52490 Tubulin nucleotide-binding domain-like
1 1 1 0 SCOP 141523 L,D-transpeptidase catalytic domain-like
1 1 1 1 SCOP 50465 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
1 1 1 0 SCOP 55424 FAD/NAD-linked reductases, dimerisation (C-terminal) domain
1 1 1 0 SCOP 48024 N-terminal domain of DnaB helicase
1 1 1 0 SCOP 143865 CorA soluble domain-like
1 1 1 1 SCOP 48592 GroEL equatorial domain-like
1 1 1 1 SCOP 56712 Prokaryotic type I DNA topoisomerase
1 1 1 1 SCOP 51690 Nicotinate/Quinolinate PRTase C-terminal domain-like
1 1 1 0 SCOP 57938 DnaJ/Hsp40 cysteine-rich domain
1 1 1 0 SCOP 160214 FlaG-like
1 1 1 0 SCOP 82114 Riboflavin kinase-like
1 1 1 0 SCOP 46906 Ribosomal protein L11, C-terminal domain
1 1 1 0 SCOP 160443 SMR domain-like
1 1 1 0 SCOP 69304 Tricorn protease N-terminal domain
1 1 1 0 SCOP 102645 CoaB-like
1 1 1 0 SCOP 56014 Nitrite and sulphite reductase 4Fe-4S domain-like
1 1 1 0 SCOP 54106 LysM domain
1 1 1 1 SCOP 56931 Outer membrane phospholipase A (OMPLA)
1 1 1 1 SCOP 54821 Ribosomal protein S3 C-terminal domain
1 1 1 0 SCOP 63848 Cell-division inhibitor MinC, C-terminal domain
1 1 1 0 SCOP 52009 Phosphohistidine domain
1 1 1 0 SCOP 81336 F1F0 ATP synthase subunit A
1 1 1 0 SCOP 158752 HP0242-like
1 1 1 0 SCOP 47789 C-terminal domain of RNA polymerase alpha subunit
1 1 1 0 SCOP 51344 Epsilon subunit of F1F0-ATP synthase N-terminal domain
1 1 1 0 SCOP 55658 L9 N-domain-like
1 1 1 0 SCOP 158414 HP0062-like
1 1 1 0 SCOP 158472 HAMP domain-like
1 1 1 0 SCOP 82679 N-utilization substance G protein NusG, N-terminal domain
1 1 1 0 SCOP 55190 Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
1 1 1 0 SCOP 69055 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
1 1 1 1 SCOP 52418 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
1 1 1 0 SCOP 48334 DNA repair protein MutS, domain III
1 1 1 0 SCOP 58014 Coiled-coil domain of nucleotide exchange factor GrpE
1 1 1 0 SCOP 55307 Tubulin C-terminal domain-like
1 1 1 1 SCOP 53671 Aspartate/ornithine carbamoyltransferase
1 1 1 0 SCOP 52964 TolB, N-terminal domain
1 1 1 1 SCOP 54719 Fe,Mn superoxide dismutase (SOD), C-terminal domain
1 1 1 1 SCOP 52021 Carbamoyl phosphate synthetase, small subunit N-terminal domain
1 1 1 1 SCOP 54826 Enolase N-terminal domain-like
1 1 1 1 SCOP 52029 GroEL apical domain-like
1 1 1 0 SCOP 81891 Poly A polymerase C-terminal region-like
1 1 1 0 SCOP 68912 Rho N-terminal domain-like
1 1 1 1 SCOP 54810 GMP synthetase C-terminal dimerisation domain
1 1 1 1 SCOP 56425 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
1 1 1 1 SCOP 101904 GyrA/ParC C-terminal domain-like
1 1 1 1 SCOP 46977 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
1 1 1 0 SCOP 47364 Domain of the SRP/SRP receptor G-proteins
1 1 1 0 SCOP 48300 Ribosomal protein L7/12, oligomerisation (N-terminal) domain
1 1 1 1 SCOP 100920 Heat shock protein 70kD (HSP70), peptide-binding domain
1 1 1 0 SCOP 144083 Magnesium transport protein CorA, transmembrane region
1 1 1 0 SCOP 46934 UBA-like
1 1 1 0 SCOP 47648 Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
1 1 1 0 SCOP 63418 MurE/MurF N-terminal domain
1 1 1 0 SCOP 75569 Archaeal IMP cyclohydrolase PurO
1 1 1 0 SCOP 51984 MurCD N-terminal domain
1 1 1 0 SCOP 69075 Glutamyl tRNA-reductase dimerization domain
1 1 1 0 SCOP 63882 MoeA N-terminal region -like
1 1 1 1 SCOP 140496 HP1531-like
1 1 1 0 SCOP 52113 BRCT domain
1 1 1 0 SCOP 141259 CarD-like
1 1 1 0 SCOP 82861 Mechanosensitive channel protein MscS (YggB), transmembrane region
1 1 1 0 SCOP 74942 YhbC-like, C-terminal domain
1 1 1 0 SCOP 117892 Band 7/SPFH domain
1 1 1 0 SCOP 75420 YhbC-like, N-terminal domain
1 1 1 0 SCOP 54752 RecA protein, C-terminal domain
1 1 1 0 SCOP 100934 Heat shock protein 70kD (HSP70), C-terminal subdomain
1 1 1 0 SCOP 54782 Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
1 1 1 0 SCOP 102735 Trigger factor ribosome-binding domain
1 1 1 1 SCOP 143975 IlvD/EDD N-terminal domain-like
1 1 1 0 SCOP 46557 GreA transcript cleavage protein, N-terminal domain
1 1 1 0 SCOP 54675 Nicotinate/Quinolinate PRTase N-terminal domain-like
1 1 1 0 SCOP 47807 5' to 3' exonuclease, C-terminal subdomain
1 1 1 0 SCOP 47446 Signal peptide-binding domain
1 1 1 0 SCOP 54991 Anticodon-binding domain of PheRS
1 1 1 0 SCOP 55048 Probable ACP-binding domain of malonyl-CoA ACP transacylase
1 1 1 0 SCOP 69287 Urease metallochaperone UreE, N-terminal domain
1 1 1 0 SCOP 47928 N-terminal domain of the delta subunit of the F1F0-ATP synthase
1 1 1 0 SCOP 48108 Carbamoyl phosphate synthetase, large subunit connection domain
1 1 1 1 SCOP 82051 Obg GTP-binding protein N-terminal domain
1 1 1 0 SCOP 143724 PHP14-like
1 1 1 0 SCOP 54368 Glutamine synthetase, N-terminal domain
1 1 1 1 SCOP 55261 GAD domain-like
1 1 1 0 SCOP 54713 Elongation factor Ts (EF-Ts), dimerisation domain
1 1 1 1 SCOP 64158 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain
1 1 1 0 SCOP 110942 HSP90 C-terminal domain
1 1 1 1 SCOP 54747 Ribosomal L11/L12e N-terminal domain
1 1 1 1 SCOP 46609 Fe,Mn superoxide dismutase (SOD), N-terminal domain
1 1 1 0 SCOP 69742 Glutamyl tRNA-reductase catalytic, N-terminal domain
1 1 1 1 SCOP 48168 R1 subunit of ribonucleotide reductase, N-terminal domain
1 1 1 1 SCOP 81886 Helical scaffold and wing domains of SecA
1 1 1 0 SCOP 54849 GroEL-intermediate domain like
1 1 1 0 SCOP 56194 Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
1 1 1 0 SCOP 52156 Initiation factor IF2/eIF5b, domain 3
1 1 1 0 SCOP 51064 Head domain of nucleotide exchange factor GrpE
1 1 1 0 SCOP 55653 Ribosomal protein L9 C-domain
1 1 1 0 SCOP 143517 TRCF domain-like
1 1 1 1 SCOP 101353 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
1 1 1 0 SCOP 56553 Insert subdomain of RNA polymerase alpha subunit
1 1 1 1 SCOP 74778 Aconitase B, N-terminal domain
1 1 1 0 SCOP 46929 DNA helicase RuvA subunit, C-terminal domain
1 1 1 0 SCOP 160467 PH0987 N-terminal domain-like
1 1 1 0 SCOP 54364 Translation initiation factor IF3, N-terminal domain
1 1 1 0 SCOP 69705 Transcription factor NusA, N-terminal domain
1 1 1 1 SCOP 81767 Pre-protein crosslinking domain of SecA
1 1 1 0 SCOP 140356 PPK N-terminal domain-like
1 1 1 0 SCOP 49863 Hyaluronate lyase-like, C-terminal domain
1 1 1 0 SCOP 81799 Putative methyltransferase TM0872, insert domain
1 1 1 0 SCOP 69737 Urease metallochaperone UreE, C-terminal domain
1 1 1 0 SCOP 46915 Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3

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The following superfamilies have one or more weak hits:

SCOP superfamily Myosin rod fragments
SCOP superfamily YajQ-like
SCOP superfamily Hypothetical protein VC0424
SCOP superfamily Inhibitor of vertebrate lysozyme, Ivy
SCOP superfamily Dodecin-like
SCOP superfamily Tumor suppressor gene product Apc
SCOP superfamily Zn-finger domain of Sec23/24
SCOP superfamily Prokaryotic SH3-related domain
SCOP superfamily Metal cation-transporting ATPase, ATP-binding domain N
SCOP superfamily Iron-sulfur subunit of formate dehydrogenase N, transmembrane anchor
SCOP superfamily F1F0 ATP synthase subunit B, membrane domain
SCOP superfamily Photosystem I reaction center subunit XI, PsaL
SCOP superfamily Mitotic arrest deficient-like 1, Mad1
SCOP superfamily Cullin homology domain
SCOP superfamily Variable surface antigen VlsE
SCOP superfamily Intermediate filament protein, coiled coil region
SCOP superfamily PX domain
SCOP superfamily MoeA C-terminal domain-like
SCOP superfamily Nicotinic receptor ligand binding domain-like
SCOP superfamily PTS-regulatory domain, PRD
SCOP superfamily BAG domain
SCOP superfamily Bacterial hemolysins
SCOP superfamily Influenza hemagglutinin (stalk)
SCOP superfamily Leucine zipper domain
SCOP superfamily Inhibitor of apoptosis (IAP) repeat
SCOP superfamily Metallothionein
SCOP superfamily RING/U-box
SCOP superfamily delta-Endotoxin (insectocide), N-terminal domain
SCOP superfamily Fibrinogen C-terminal domain-like
SCOP superfamily GAF domain-like
SCOP superfamily Methylated DNA-protein cysteine methyltransferase domain
SCOP superfamily RNI-like
SCOP superfamily Barstar-related
SCOP superfamily Cobalamin (vitamin B12)-dependent enzymes
SCOP superfamily (Trans)glycosidases
SCOP superfamily Transcription factor IIA (TFIIA), beta-barrel domain
SCOP superfamily MOP-like
SCOP superfamily Cell growth inhibitor/plasmid maintenance toxic component
SCOP superfamily Transglutaminase, two C-terminal domains
SCOP superfamily 14-3-3 protein
SCOP superfamily Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
SCOP superfamily STAT
SCOP superfamily Homeodomain-like
SCOP superfamily Prefoldin
SCOP superfamily PspA lactotransferrin-binding region
SCOP superfamily Photosystem II antenna protein-like
SCOP superfamily V-type ATPase subunit E-like
SCOP superfamily BLRF2-like
SCOP superfamily YdhG-like
SCOP superfamily Lipase chaperone-like
SCOP superfamily Peptidoglycan deacetylase N-terminal noncatalytic region
SCOP superfamily YkuJ-like
SCOP superfamily Mediator hinge subcomplex-like
SCOP superfamily Type III secretion system domain
SCOP superfamily FlgN-like
SCOP superfamily MxiH-like
SCOP superfamily Connexin43
SCOP superfamily DNA primase DnaG, C-terminal domain
SCOP superfamily DNA-binding domain of EIN3-like
SCOP superfamily ParB/Sulfiredoxin
SCOP superfamily PhoU-like
SCOP superfamily BAR/IMD domain-like
SCOP superfamily PetL subunit of the cytochrome b6f complex
SCOP superfamily NHL repeat
SCOP superfamily Stathmin
SCOP superfamily Hypothetical protein ST1625
SCOP superfamily Hsp90 co-chaperone CDC37
SCOP superfamily XPC-binding domain

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