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Thermodesulfobium narugense DSM 14796 superfamily assignments

Taxonomy
Taxonomy browser entry

Bacteria; Terrabacteria group; Firmicutes; Clostridia; Thermoanaerobacterales; Thermodesulfobiaceae; Thermodesulfobium; Thermodesulfobium narugense; Thermodesulfobium narugense DSM 14796

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Fasta format sequences
Domain assignments


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Assignment statistics

Sequences: 1807 total
1358 (75 %) with assignment
320 average length
70 % amino acid coverage
Domains: 2011 total
588 unique superfamilies
363 unique families
298 average length
3.4 average superfamily size
71 % formed by duplication
Domain combinations: 358 domain pairs
784 unique architectures

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Superfamily assignments

Domains

Proteins

Architectures

Families

SCOP link

Superfamilies

144 129 53 7 SCOP 52540 P-loop containing nucleoside triphosphate hydrolases
42 42 15 6 SCOP 51735 NAD(P)-binding Rossmann-fold domains
34 17 15 0 SCOP 55785 PYP-like sensor domain (PAS domain)
33 33 14 1 SCOP 54862 4Fe-4S ferredoxins
26 26 9 5 SCOP 53335 S-adenosyl-L-methionine-dependent methyltransferases
25 23 9 1 SCOP 52402 Adenine nucleotide alpha hydrolases-like
24 23 13 0 SCOP 46785 "Winged helix" DNA-binding domain
23 22 3 0 SCOP 103473 MFS general substrate transporter
22 19 14 1 SCOP 51905 FAD/NAD(P)-binding domain
21 20 14 1 SCOP 50249 Nucleic acid-binding proteins
21 20 11 1 SCOP 109604 HD-domain/PDEase-like
20 19 9 3 SCOP 53448 Nucleotide-diphospho-sugar transferases
20 20 6 2 SCOP 53756 UDP-Glycosyltransferase/glycogen phosphorylase
20 20 2 2 SCOP 102114 Radical SAM enzymes
20 20 16 1 SCOP 55073 Nucleotide cyclase
19 19 2 4 SCOP 53383 PLP-dependent transferases
19 16 12 4 SCOP 54211 Ribosomal protein S5 domain 2-like
18 12 7 2 SCOP 53067 Actin-like ATPase domain
17 16 6 1 SCOP 52833 Thioredoxin-like
17 15 6 3 SCOP 52518 Thiamin diphosphate-binding fold (THDP-binding)
17 17 4 1 SCOP 53098 Ribonuclease H-like
15 15 10 4 SCOP 52374 Nucleotidylyl transferase
15 15 7 1 SCOP 53850 Periplasmic binding protein-like II
15 12 11 0 SCOP 55021 ACT-like
14 14 3 2 SCOP 56281 Metallo-hydrolase/oxidoreductase
13 13 5 4 SCOP 51569 Aldolase
13 13 10 1 SCOP 55681 Class II aaRS and biotin synthetases
13 10 10 1 SCOP 58104 Methyl-accepting chemotaxis protein (MCP) signaling domain
12 11 8 1 SCOP 46548 alpha-helical ferredoxin
12 6 5 0 SCOP 82185 Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
11 10 8 4 SCOP 56059 Glutathione synthetase ATP-binding domain-like
11 10 5 0 SCOP 48452 TPR-like
11 9 7 0 SCOP 55781 GAF domain-like
11 10 7 2 SCOP 50447 Translation proteins
10 10 2 0 SCOP 75169 DsrEFH-like
10 9 5 1 SCOP 52172 CheY-like
10 10 7 0 SCOP 141868 EAL domain-like
10 7 7 0 SCOP 103190 Sensory domain-like
9 9 5 2 SCOP 52317 Class I glutamine amidotransferase-like
9 9 3 0 SCOP 46689 Homeodomain-like
9 8 7 2 SCOP 81301 Nucleotidyltransferase
9 7 4 1 SCOP 111369 HlyD-like secretion proteins
9 9 2 2 SCOP 48179 6-phosphogluconate dehydrogenase C-terminal domain-like
9 9 3 2 SCOP 55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
8 8 2 1 SCOP 161098 MetI-like
8 8 3 0 SCOP 56784 HAD-like
8 8 2 0 SCOP 52218 Flavoproteins
8 8 3 1 SCOP 51182 RmlC-like cupins
8 8 6 2 SCOP 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
8 4 2 0 SCOP 103481 Multidrug resistance efflux transporter EmrE
8 5 4 1 SCOP 82866 Multidrug efflux transporter AcrB transmembrane domain
8 4 2 1 SCOP 54980 EF-G C-terminal domain-like
8 8 4 0 SCOP 52922 TK C-terminal domain-like
8 3 2 0 SCOP 82693 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
7 7 3 2 SCOP 53271 PRTase-like
7 7 1 4 SCOP 51366 Ribulose-phoshate binding barrel
7 7 2 2 SCOP 100950 NagB/RpiA/CoA transferase-like
7 7 3 3 SCOP 52096 ClpP/crotonase
7 7 2 1 SCOP 56801 Acetyl-CoA synthetase-like
7 7 7 1 SCOP 54631 CBS-domain pair
7 7 6 1 SCOP 53218 Molybdenum cofactor biosynthesis proteins
7 5 4 0 SCOP 88659 Sigma3 and sigma4 domains of RNA polymerase sigma factors
6 6 4 2 SCOP 53927 Cytidine deaminase-like
6 6 1 2 SCOP 53720 ALDH-like
6 6 3 0 SCOP 56935 Porins
6 6 5 2 SCOP 56235 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
6 6 4 1 SCOP 50692 ADC-like
6 4 4 0 SCOP 50998 Quinoprotein alcohol dehydrogenase-like
6 6 4 1 SCOP 53706 Formate dehydrogenase/DMSO reductase, domains 1-3
6 6 4 0 SCOP 56176 FAD-binding/transporter-associated domain-like
6 6 5 1 SCOP 47323 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
6 6 4 1 SCOP 56014 Nitrite and sulphite reductase 4Fe-4S domain-like
6 5 4 1 SCOP 52440 PreATP-grasp domain
6 4 3 1 SCOP 52210 Succinyl-CoA synthetase domains
6 5 2 1 SCOP 56042 PurM C-terminal domain-like
6 5 2 1 SCOP 55326 PurM N-terminal domain-like
5 5 2 0 SCOP 53474 alpha/beta-Hydrolases
5 5 2 2 SCOP 53613 Ribokinase-like
5 5 4 2 SCOP 50104 Translation proteins SH3-like domain
5 5 3 1 SCOP 55174 Alpha-L RNA-binding motif
5 5 3 2 SCOP 75217 alpha/beta knot
5 5 3 0 SCOP 52980 Restriction endonuclease-like
5 5 2 2 SCOP 56770 HydA/Nqo6-like
5 4 2 0 SCOP 117143 Flagellar hook protein flgE
5 5 3 1 SCOP 51395 FMN-linked oxidoreductases
5 5 3 1 SCOP 53187 Zn-dependent exopeptidases
5 5 1 0 SCOP 56954 Outer membrane efflux proteins (OEP)
5 5 1 2 SCOP 56762 HydB/Nqo4-like
5 5 2 0 SCOP 46894 C-terminal effector domain of the bipartite response regulators
5 4 4 1 SCOP 54814 Prokaryotic type KH domain (KH-domain type II)
5 5 2 0 SCOP 53323 Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
5 5 3 0 SCOP 57802 Rubredoxin-like
5 4 3 0 SCOP 81593 Nucleotidyltransferase substrate binding subunit/domain
5 5 3 1 SCOP 103501 Respiratory nitrate reductase 1 gamma chain
5 5 3 0 SCOP 53244 MurD-like peptide ligases, peptide-binding domain
5 4 4 0 SCOP 50156 PDZ domain-like
5 5 3 2 SCOP 53623 MurD-like peptide ligases, catalytic domain
5 2 2 0 SCOP 53738 Phosphoglucomutase, first 3 domains
5 3 2 0 SCOP 82714 Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
4 4 3 3 SCOP 51556 Metallo-dependent hydrolases
4 4 2 2 SCOP 53697 SIS domain
4 4 3 2 SCOP 55120 Pseudouridine synthase
4 4 3 1 SCOP 64182 DHH phosphoesterases
4 4 2 0 SCOP 56300 Metallo-dependent phosphatases
4 4 2 3 SCOP 53659 Isocitrate/Isopropylmalate dehydrogenase-like
4 4 3 2 SCOP 53633 Carbamate kinase-like
4 4 3 2 SCOP 51161 Trimeric LpxA-like enzymes
4 4 3 1 SCOP 53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes
4 4 1 0 SCOP 48150 DNA-glycosylase
4 4 3 4 SCOP 51621 Phosphoenolpyruvate/pyruvate domain
4 4 1 1 SCOP 54637 Thioesterase/thiol ester dehydrase-isomerase
4 4 2 1 SCOP 56655 Carbohydrate phosphatase
4 3 2 1 SCOP 64518 Phase 1 flagellin
4 2 2 0 SCOP 50978 WD40 repeat-like
4 4 4 2 SCOP 53649 Alkaline phosphatase-like
4 4 3 0 SCOP 56317 Carbon-nitrogen hydrolase
4 3 2 0 SCOP 48208 Six-hairpin glycosidases
4 4 2 1 SCOP 88713 Glycoside hydrolase/deacetylase
4 4 1 1 SCOP 55620 Tetrahydrobiopterin biosynthesis enzymes-like
4 4 1 0 SCOP 81342 Transmembrane di-heme cytochromes
4 4 4 1 SCOP 56601 beta-lactamase/transpeptidase-like
4 4 3 0 SCOP 46955 Putative DNA-binding domain
4 4 4 1 SCOP 51230 Single hybrid motif
4 4 3 0 SCOP 89550 PHP domain-like
4 4 1 1 SCOP 54913 GlnB-like
4 4 4 0 SCOP 88697 PUA domain-like
4 4 3 0 SCOP 53146 Nitrogenase accessory factor-like
4 3 3 1 SCOP 56024 Phospholipase D/nuclease
4 4 2 1 SCOP 90123 ABC transporter transmembrane region
4 4 2 0 SCOP 55103 FAD-linked oxidases, C-terminal domain
4 4 1 2 SCOP 53223 Aminoacid dehydrogenase-like, N-terminal domain
4 4 3 0 SCOP 47384 Homodimeric domain of signal transducing histidine kinase
4 4 3 0 SCOP 51971 Nucleotide-binding domain
4 2 2 0 SCOP 51120 beta-Roll
4 4 3 1 SCOP 56425 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
4 4 3 1 SCOP 63882 MoeA N-terminal region -like
4 4 2 1 SCOP 55124 Nitrite/Sulfite reductase N-terminal domain-like
4 2 2 0 SCOP 49493 HSP40/DnaJ peptide-binding domain
3 3 3 0 SCOP 56112 Protein kinase-like (PK-like)
3 3 2 1 SCOP 47240 Ferritin-like
3 3 3 0 SCOP 109998 Triger factor/SurA peptide-binding domain-like
3 3 2 2 SCOP 50129 GroES-like
3 3 1 1 SCOP 48557 L-aspartase-like
3 3 3 1 SCOP 55821 YrdC/RibB
3 3 1 0 SCOP 51261 Duplicated hybrid motif
3 3 3 0 SCOP 54292 2Fe-2S ferredoxin-like
3 3 2 0 SCOP 64307 SirA-like
3 3 1 2 SCOP 56796 Dehydroquinate synthase-like
3 3 3 1 SCOP 51419 PLP-binding barrel
3 3 1 1 SCOP 51430 NAD(P)-linked oxidoreductase
3 3 2 0 SCOP 55469 FMN-dependent nitroreductase-like
3 3 2 0 SCOP 55729 Acyl-CoA N-acyltransferases (Nat)
3 3 3 1 SCOP 88723 PIN domain-like
3 3 3 0 SCOP 54534 FKBP-like
3 3 2 1 SCOP 52283 Formate/glycerate dehydrogenase catalytic domain-like
3 3 3 0 SCOP 46458 Globin-like
3 3 3 0 SCOP 52954 Class II aaRS ABD-related
3 3 2 1 SCOP 52016 LeuD/IlvD-like
3 3 1 1 SCOP 111352 Ammonium transporter
3 3 2 0 SCOP 47413 lambda repressor-like DNA-binding domains
3 3 2 0 SCOP 54523 Pili subunits
3 3 1 1 SCOP 53807 "Helical backbone" metal receptor
3 3 2 1 SCOP 88946 Sigma2 domain of RNA polymerase sigma factors
3 3 3 0 SCOP 81901 HCP-like
3 3 3 2 SCOP 52467 DHS-like NAD/FAD-binding domain
3 3 2 1 SCOP 53955 Lysozyme-like
3 3 2 0 SCOP 50800 PK beta-barrel domain-like
3 3 1 1 SCOP 53822 Periplasmic binding protein-like I
3 3 2 0 SCOP 51338 Composite domain of metallo-dependent hydrolases
3 2 2 0 SCOP 101386 all-alpha NTP pyrophosphatases
3 3 2 0 SCOP 50037 C-terminal domain of transcriptional repressors
3 2 2 2 SCOP 53901 Thiolase-like
3 3 3 0 SCOP 47781 RuvA domain 2-like
3 3 3 1 SCOP 103039 CheC-like
3 3 3 0 SCOP 46565 Chaperone J-domain
3 3 2 1 SCOP 50465 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
3 3 2 0 SCOP 46589 tRNA-binding arm
3 1 1 0 SCOP 55979 DNA clamp
3 3 2 1 SCOP 51246 Rudiment single hybrid motif
3 1 1 1 SCOP 55973 S-adenosylmethionine synthetase
3 2 2 0 SCOP 49464 Carboxypeptidase regulatory domain-like
3 3 3 0 SCOP 158472 HAMP domain-like
3 3 2 1 SCOP 46977 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
3 2 2 0 SCOP 63380 Riboflavin synthase domain-like
3 3 1 1 SCOP 48310 Aldehyde ferredoxin oxidoreductase, C-terminal domains
3 3 3 1 SCOP 50677 ValRS/IleRS/LeuRS editing domain
3 3 1 1 SCOP 55031 Bacterial exopeptidase dimerisation domain
3 3 1 1 SCOP 56228 Aldehyde ferredoxin oxidoreductase, N-terminal domain
3 2 2 0 SCOP 55666 Ribonuclease PH domain 2-like
2 2 2 0 SCOP 48013 NusB-like
2 2 1 0 SCOP 57829 Zn-binding ribosomal proteins
2 2 2 1 SCOP 53790 Tetrapyrrole methylase
2 2 2 0 SCOP 57716 Glucocorticoid receptor-like (DNA-binding domain)
2 2 1 1 SCOP 53137 Translational machinery components
2 2 2 1 SCOP 55920 Creatinase/aminopeptidase
2 2 1 0 SCOP 143800 L28p-like
2 2 1 1 SCOP 75620 Release factor
2 2 1 1 SCOP 53748 Phosphoglycerate kinase
2 2 2 1 SCOP 47729 IHF-like DNA-binding proteins
2 2 2 0 SCOP 55486 Metalloproteases ("zincins"), catalytic domain
2 2 2 2 SCOP 64484 beta and beta-prime subunits of DNA dependent RNA-polymerase
2 2 1 1 SCOP 51730 FAD-linked oxidoreductase
2 2 1 0 SCOP 55811 Nudix
2 2 1 1 SCOP 51412 Inosine monophosphate dehydrogenase (IMPDH)
2 2 1 0 SCOP 54285 MoaD/ThiS
2 2 1 0 SCOP 53254 Phosphoglycerate mutase-like
2 2 1 1 SCOP 55205 EPT/RTPC-like
2 2 1 1 SCOP 55298 YjgF-like
2 2 1 1 SCOP 48576 Terpenoid synthases
2 2 1 1 SCOP 69721 DsrC, the gamma subunit of dissimilatory sulfite reductase
2 2 2 1 SCOP 50475 FMN-binding split barrel
2 2 1 0 SCOP 55315 L30e-like
2 2 2 2 SCOP 56672 DNA/RNA polymerases
2 1 1 1 SCOP 51726 UROD/MetE-like
2 2 2 1 SCOP 50891 Cyclophilin-like
2 2 2 1 SCOP 53328 Formyltransferase
2 2 2 0 SCOP 54427 NTF2-like
2 2 1 1 SCOP 56322 ADC synthase
2 2 2 0 SCOP 54001 Cysteine proteinases
2 2 1 0 SCOP 69572 Activating enzymes of the ubiquitin-like proteins
2 1 1 1 SCOP 54506 Diaminopimelate epimerase-like
2 2 1 1 SCOP 56752 D-aminoacid aminotransferase-like PLP-dependent enzymes
2 2 1 0 SCOP 51306 LexA/Signal peptidase
2 2 1 0 SCOP 81343 Fumarate reductase respiratory complex transmembrane subunits
2 2 2 0 SCOP 55008 HMA, heavy metal-associated domain
2 2 2 2 SCOP 55931 Glutamine synthetase/guanido kinase
2 2 1 1 SCOP 143243 Nqo5-like
2 2 2 1 SCOP 51717 Dihydropteroate synthetase-like
2 2 2 2 SCOP 51998 PFL-like glycyl radical enzymes
2 2 1 0 SCOP 54909 Dimeric alpha+beta barrel
2 2 1 2 SCOP 64438 CNF1/YfiH-like putative cysteine hydrolases
2 2 2 1 SCOP 50494 Trypsin-like serine proteases
2 2 1 0 SCOP 143120 YefM-like
2 2 1 0 SCOP 118196 YaeB-like
2 2 2 1 SCOP 50341 CheW-like
2 2 2 0 SCOP 57783 Zinc beta-ribbon
2 2 1 0 SCOP 143100 TTHA1013/TTHA0281-like
2 1 1 0 SCOP 82697 PurS-like
2 2 1 0 SCOP 56349 DNA breaking-rejoining enzymes
2 2 2 1 SCOP 52507 Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
2 2 1 0 SCOP 51206 cAMP-binding domain-like
2 2 1 0 SCOP 161111 Cation efflux protein transmembrane domain-like
2 2 1 1 SCOP 53732 Aconitase iron-sulfur domain
2 2 2 0 SCOP 54975 Acylphosphatase/BLUF domain-like
2 2 2 1 SCOP 52335 Methylglyoxal synthase-like
2 1 1 0 SCOP 63411 LuxS/MPP-like metallohydrolase
2 2 1 2 SCOP 56821 Prismane protein-like
2 2 1 0 SCOP 143430 TTP0101/SSO1404-like
2 2 2 1 SCOP 101801 Surface presentation of antigens (SPOA)
2 2 1 0 SCOP 53163 HybD-like
2 2 1 1 SCOP 75005 Arabinanase/levansucrase/invertase
2 2 2 0 SCOP 82171 DPP6 N-terminal domain-like
2 2 2 0 SCOP 158791 MgtE N-terminal domain-like
2 2 1 1 SCOP 56574 Serpins
2 2 2 1 SCOP 55186 ThrRS/AlaRS common domain
2 2 2 0 SCOP 63867 MoeA C-terminal domain-like
2 2 2 0 SCOP 55424 FAD/NAD-linked reductases, dimerisation (C-terminal) domain
2 2 2 1 SCOP 69336 Alpha subunit of glutamate synthase, C-terminal domain
2 2 1 1 SCOP 51690 Nicotinate/Quinolinate PRTase C-terminal domain-like
2 2 2 0 SCOP 81923 Double Clp-N motif
2 2 1 0 SCOP 47188 Hemerythrin-like
2 2 2 1 SCOP 56719 Type II DNA topoisomerase
2 2 2 0 SCOP 52009 Phosphohistidine domain
2 2 2 0 SCOP 81665 Calcium ATPase, transmembrane domain M
2 1 1 0 SCOP 53681 Aspartate/glutamate racemase
2 1 1 1 SCOP 48029 FliG
2 2 2 1 SCOP 52418 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
2 2 1 1 SCOP 53671 Aspartate/ornithine carbamoyltransferase
2 2 2 0 SCOP 142984 Nqo1 middle domain-like
2 2 2 1 SCOP 50621 Alanine racemase C-terminal domain-like
2 2 2 0 SCOP 54791 Eukaryotic type KH-domain (KH-domain type I)
2 2 1 0 SCOP 55060 GHMP Kinase, C-terminal domain
2 2 2 0 SCOP 81891 Poly A polymerase C-terminal region-like
2 2 2 0 SCOP 47979 Iron-dependent repressor protein, dimerization domain
2 2 2 1 SCOP 53920 Fe-only hydrogenase
2 2 2 0 SCOP 143548 Serine metabolism enzymes domain
2 2 2 0 SCOP 47364 Domain of the SRP/SRP receptor G-proteins
2 2 2 0 SCOP 46600 C-terminal UvrC-binding domain of UvrB
2 2 1 0 SCOP 160240 Cation efflux protein cytoplasmic domain-like
2 2 2 0 SCOP 47648 Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
2 2 1 0 SCOP 63418 MurE/MurF N-terminal domain
2 2 1 0 SCOP 110921 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
2 2 1 0 SCOP 51984 MurCD N-terminal domain
2 2 2 0 SCOP 54768 dsRNA-binding domain-like
2 1 1 1 SCOP 56053 Ribosomal protein L6
2 2 1 0 SCOP 52413 UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
2 2 2 0 SCOP 55957 Phosphoglucomutase, C-terminal domain
2 2 2 0 SCOP 140490 Nqo1C-terminal domain-like
2 2 1 0 SCOP 54675 Nicotinate/Quinolinate PRTase N-terminal domain-like
2 2 1 1 SCOP 50615 N-terminal domain of alpha and beta subunits of F1 ATP synthase
2 2 2 0 SCOP 82708 R3H domain
2 2 2 1 SCOP 81271 TGS-like
2 2 2 0 SCOP 81653 Calcium ATPase, transduction domain A
2 2 1 1 SCOP 47917 C-terminal domain of alpha and beta subunits of F1 ATP synthase
2 2 2 0 SCOP 56519 Penicillin binding protein dimerisation domain
1 1 1 0 SCOP 56731 DNA primase core
1 1 1 1 SCOP 53167 Purine and uridine phosphorylases
1 1 1 1 SCOP 74982 Small protein B (SmpB)
1 1 1 1 SCOP 56808 Ribosomal protein L1
1 1 1 1 SCOP 53178 Peptidyl-tRNA hydrolase-like
1 1 1 1 SCOP 47973 Ribosomal protein S7
1 1 1 0 SCOP 46911 Ribosomal protein S18
1 1 1 1 SCOP 52141 Uracil-DNA glycosylase-like
1 1 1 1 SCOP 75304 Amidase signature (AS) enzymes
1 1 1 0 SCOP 143597 YojJ-like
1 1 1 1 SCOP 56420 Peptide deformylase
1 1 1 0 SCOP 81606 PP2C-like
1 1 1 0 SCOP 142433 CinA-like
1 1 1 0 SCOP 111331 NAD kinase/diacylglycerol kinase-like
1 1 1 1 SCOP 54197 HIT-like
1 1 1 0 SCOP 82607 YbaB-like
1 1 1 0 SCOP 64376 YlxR-like
1 1 1 0 SCOP 89919 Ribosome-binding factor A, RbfA
1 1 1 1 SCOP 54999 Ribosomal protein S10
1 1 1 1 SCOP 52166 Ribosomal protein L4
1 1 1 0 SCOP 54189 Ribosomal proteins S24e, L23 and L15e
1 1 1 1 SCOP 54570 Ribosomal protein S19
1 1 1 1 SCOP 54843 Ribosomal protein L22
1 1 1 1 SCOP 54686 Ribosomal protein L16p/L10e
1 1 1 1 SCOP 50193 Ribosomal protein L14
1 1 1 1 SCOP 55282 RL5-like
1 1 1 1 SCOP 56047 Ribosomal protein S8
1 1 1 1 SCOP 52080 Ribosomal proteins L15p and L18e
1 1 1 0 SCOP 103491 Preprotein translocase SecY subunit
1 1 1 0 SCOP 57840 Ribosomal protein L36
1 1 1 1 SCOP 46946 S13-like H2TH domain
1 1 1 1 SCOP 64263 Prokaryotic ribosomal protein L17
1 1 1 0 SCOP 143034 L35p-like
1 1 1 1 SCOP 74731 Ribosomal protein L20
1 1 1 0 SCOP 56214 4'-phosphopantetheinyl transferase
1 1 1 0 SCOP 69593 Glycerol-3-phosphate (1)-acyltransferase
1 1 1 0 SCOP 89447 AbrB/MazE/MraZ-like
1 1 1 0 SCOP 53597 Dihydrofolate reductase-like
1 1 1 0 SCOP 141091 L21p-like
1 1 1 0 SCOP 110324 Ribosomal L27 protein-like
1 1 1 0 SCOP 51658 Xylose isomerase-like
1 1 1 0 SCOP 47336 ACP-like
1 1 1 1 SCOP 75625 YebC-like
1 1 1 1 SCOP 82649 SufE/NifU
1 1 1 1 SCOP 160369 Ribosomal protein L10-like
1 1 1 0 SCOP 46992 Ribosomal protein S20
1 1 1 1 SCOP 89623 Ribose/Galactose isomerase RpiB/AlsB
1 1 1 1 SCOP 52943 ATP synthase (F1-ATPase), gamma subunit
1 1 1 0 SCOP 81333 F1F0 ATP synthase subunit C
1 1 1 1 SCOP 109755 PhoU-like
1 1 1 1 SCOP 52161 Ribosomal protein L13
1 1 1 1 SCOP 47060 S15/NS1 RNA-binding domain
1 1 1 1 SCOP 51351 Triosephosphate isomerase (TIM)
1 1 1 1 SCOP 55194 Ribosome recycling factor, RRF
1 1 1 0 SCOP 54565 Ribosomal protein S16
1 1 1 1 SCOP 69765 IpsF-like
1 1 1 0 SCOP 52821 Rhodanese/Cell cycle control phosphatase
1 1 1 1 SCOP 103263 Chorismate synthase, AroC
1 1 1 1 SCOP 51283 dUTPase-like
1 1 1 1 SCOP 111337 QueA-like
1 1 1 1 SCOP 51713 tRNA-guanine transglycosylase
1 1 1 0 SCOP 56276 S-adenosylmethionine decarboxylase
1 1 1 1 SCOP 52313 Ribosomal protein S2
1 1 1 1 SCOP 64005 Undecaprenyl diphosphate synthase
1 1 1 1 SCOP 142695 RibA-like
1 1 1 0 SCOP 102705 NIF3 (NGG1p interacting factor 3)-like
1 1 1 1 SCOP 81345 ABC transporter involved in vitamin B12 uptake, BtuC
1 1 1 0 SCOP 55229 Cell division protein MinE topological specificity domain
1 1 1 0 SCOP 140566 FlgN-like
1 1 1 1 SCOP 52304 Type II 3-dehydroquinate dehydratase
1 1 1 0 SCOP 117130 CsrA-like
1 1 1 0 SCOP 50685 Barwin-like endoglucanases
1 1 1 1 SCOP 52121 Lumazine synthase
1 1 1 0 SCOP 46561 Ribosomal protein L29 (L29p)
1 1 1 0 SCOP 54995 Ribosomal protein S6
1 1 1 0 SCOP 49764 HSP20-like chaperones
1 1 1 0 SCOP 48371 ARM repeat
1 1 1 1 SCOP 56104 SAICAR synthase-like
1 1 1 0 SCOP 50182 Sm-like ribonucleoproteins
1 1 1 1 SCOP 52949 Macro domain-like
1 1 1 0 SCOP 63829 Calcium-dependent phosphotriesterase
1 1 1 1 SCOP 69500 DTD-like
1 1 1 0 SCOP 47226 Histidine-containing phosphotransfer domain, HPT domain
1 1 1 0 SCOP 55144 LigT-like
1 1 1 0 SCOP 51445 (Trans)glycosidases
1 1 1 1 SCOP 53774 Glutaminase/Asparaginase
1 1 1 0 SCOP 53639 AraD/HMP-PK domain-like
1 1 1 1 SCOP 52972 ITPase-like
1 1 1 1 SCOP 54919 Nucleoside diphosphate kinase, NDK
1 1 1 0 SCOP 110849 ParB/Sulfiredoxin
1 1 1 0 SCOP 111126 Ligand-binding domain in the NO signalling and Golgi transport
1 1 1 0 SCOP 53056 beta-carbonic anhydrase, cab
1 1 1 0 SCOP 55856 Cytochrome b5-like heme/steroid binding domain
1 1 1 0 SCOP 55257 RBP11-like subunits of RNA polymerase
1 1 1 1 SCOP 56529 FAH
1 1 1 0 SCOP 64153 YjeF N-terminal domain-like
1 1 1 0 SCOP 52151 FabD/lysophospholipase-like
1 1 1 0 SCOP 69618 HemD-like
1 1 1 0 SCOP 143447 AMMECR1-like
1 1 1 0 SCOP 103378 2-methylcitrate dehydratase PrpD
1 1 1 1 SCOP 55909 Pentein
1 1 1 1 SCOP 52788 Phosphotyrosine protein phosphatases I
1 1 1 0 SCOP 63562 RPB6/omega subunit-like
1 1 1 0 SCOP 101960 Stabilizer of iron transporter SufD
1 1 1 1 SCOP 141734 HisI-like
1 1 1 0 SCOP 57662 Ferredoxin thioredoxin reductase (FTR), catalytic beta chain
1 1 1 0 SCOP 144091 Rhomboid-like
1 1 1 0 SCOP 101478 ADP-ribosylglycohydrolase
1 1 1 0 SCOP 49478 Cna protein B-type domain
1 1 1 1 SCOP 111038 YjbQ-like
1 1 1 1 SCOP 55040 Molybdenum cofactor biosynthesis protein C, MoaC
1 1 1 0 SCOP 69118 AhpD-like
1 1 1 0 SCOP 102405 MCP/YpsA-like
1 1 1 0 SCOP 144020 FdhE-like
1 1 1 0 SCOP 81324 Voltage-gated potassium channels
1 1 1 1 SCOP 53795 PEP carboxykinase-like
1 1 1 1 SCOP 52255 N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
1 1 1 0 SCOP 143011 RelE-like
1 1 1 0 SCOP 55331 Tautomerase/MIF
1 1 1 1 SCOP 142754 NadA-like
1 1 1 1 SCOP 56266 DmpA/ArgJ-like
1 1 1 0 SCOP 82771 GIY-YIG endonuclease
1 1 1 0 SCOP 56524 Oxidoreductase molybdopterin-binding domain
1 1 1 0 SCOP 160246 EspE N-terminal domain-like
1 1 1 0 SCOP 55083 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
1 1 1 1 SCOP 103256 Hypothetical protein TM0160
1 1 1 0 SCOP 46767 Methylated DNA-protein cysteine methyltransferase, C-terminal domain
1 1 1 0 SCOP 53300 vWA-like
1 1 1 1 SCOP 89733 L-sulfolactate dehydrogenase-like
1 1 1 1 SCOP 64167 SurE-like
1 1 1 1 SCOP 63892 Pyridoxine 5'-phosphate synthase
1 1 1 0 SCOP 55154 CYTH-like phosphatases
1 1 1 1 SCOP 81340 Clc chloride channel
1 1 1 0 SCOP 141000 Glu-tRNAGln amidotransferase C subunit
1 1 1 0 SCOP 116842 XseB-like
1 1 1 0 SCOP 54736 ClpS-like
1 1 1 1 SCOP 111304 Recombination protein RecR
1 1 1 0 SCOP 69796 Thymidylate synthase-complementing protein Thy1
1 1 1 0 SCOP 69065 RNase III domain-like
1 1 1 1 SCOP 56219 DNase I-like
1 1 1 0 SCOP 55200 Translation initiation factor IF3, C-terminal domain
1 1 1 0 SCOP 82689 Mechanosensitive channel protein MscS (YggB), C-terminal domain
1 1 1 1 SCOP 51391 Thiamin phosphate synthase
1 1 1 0 SCOP 48173 Cryptochrome/photolyase FAD-binding domain
1 1 1 0 SCOP 52425 Cryptochrome/photolyase, N-terminal domain
1 1 1 0 SCOP 50969 YVTN repeat-like/Quinoprotein amine dehydrogenase
1 1 1 0 SCOP 89095 GatB/YqeY motif
1 1 1 0 SCOP 103088 OmpA-like
1 1 1 0 SCOP 55826 YbaK/ProRS associated domain
1 1 1 1 SCOP 103025 Folate-binding domain
1 1 1 0 SCOP 48295 TrpR-like
1 1 1 0 SCOP 143631 ApbE-like
1 1 1 0 SCOP 144010 CofE-like
1 1 1 0 SCOP 158622 YheA/YmcA-like
1 1 1 0 SCOP 140683 SP0561-like
1 1 1 1 SCOP 117457 FumA C-terminal domain-like
1 1 1 0 SCOP 111384 OmpH-like
1 1 1 1 SCOP 75138 HprK N-terminal domain-like
1 1 1 0 SCOP 101116 Flagellar export chaperone FliS
1 1 1 0 SCOP 141457 BH3618-like
1 1 1 1 SCOP 110738 Glycerate kinase I
1 1 1 1 SCOP 142338 CofD-like
1 1 1 0 SCOP 51219 TRAP-like
1 1 1 0 SCOP 50486 FMT C-terminal domain-like
1 1 1 0 SCOP 141130 Acetamidase/Formamidase-like
1 1 1 0 SCOP 69786 YggU-like
1 1 1 0 SCOP 64076 MTH938-like
1 1 1 0 SCOP 159127 HupF/HypC-like
1 1 1 0 SCOP 50331 MOP-like
1 1 1 1 SCOP 51604 Enolase C-terminal domain-like
1 1 1 0 SCOP 89155 TorD-like
1 1 1 0 SCOP 69754 Ribosome binding protein Y (YfiA homologue)
1 1 1 0 SCOP 103007 Hypothetical protein TT1725
1 1 1 1 SCOP 56271 Pyruvoyl-dependent histidine and arginine decarboxylases
1 1 1 0 SCOP 74653 TolA/TonB C-terminal domain
1 1 1 1 SCOP 52738 Methylesterase CheB, C-terminal domain
1 1 1 1 SCOP 56091 DNA ligase/mRNA capping enzyme, catalytic domain
1 1 1 1 SCOP 111321 AF1104-like
1 1 1 0 SCOP 111249 Sulfolobus fructose-1,6-bisphosphatase-like
1 1 1 1 SCOP 49367 Superoxide reductase-like
1 1 1 0 SCOP 160980 SSO1389-like
1 1 1 1 SCOP 52490 Tubulin nucleotide-binding domain-like
1 1 1 1 SCOP 103165 Ta1353-like
1 1 1 0 SCOP 48008 GntR ligand-binding domain-like
1 1 1 0 SCOP 53092 Creatinase/prolidase N-terminal domain
1 1 1 1 SCOP 69864 Argininosuccinate synthetase, C-terminal domain
1 1 1 0 SCOP 52343 Ferredoxin reductase-like, C-terminal NADP-linked domain
1 1 1 0 SCOP 48024 N-terminal domain of DnaB helicase
1 1 1 1 SCOP 48592 GroEL equatorial domain-like
1 1 1 1 SCOP 56712 Prokaryotic type I DNA topoisomerase
1 1 1 0 SCOP 57938 DnaJ/Hsp40 cysteine-rich domain
1 1 1 0 SCOP 159713 Dhaf3308-like
1 1 1 0 SCOP 160214 FlaG-like
1 1 1 0 SCOP 55608 Homing endonucleases
1 1 1 0 SCOP 82114 Riboflavin kinase-like
1 1 1 0 SCOP 46906 Ribosomal protein L11, C-terminal domain
1 1 1 0 SCOP 160443 SMR domain-like
1 1 1 1 SCOP 102645 CoaB-like
1 1 1 0 SCOP 160544 EscU C-terminal domain-like
1 1 1 1 SCOP 143555 FwdE-like
1 1 1 1 SCOP 54821 Ribosomal protein S3 C-terminal domain
1 1 1 1 SCOP 48019 post-AAA+ oligomerization domain-like
1 1 1 0 SCOP 81573 F1F0 ATP synthase subunit B, membrane domain
1 1 1 0 SCOP 63848 Cell-division inhibitor MinC, C-terminal domain
1 1 1 0 SCOP 160945 PH0156-like
1 1 1 0 SCOP 52935 PK C-terminal domain-like
1 1 1 0 SCOP 81336 F1F0 ATP synthase subunit A
1 1 1 0 SCOP 47789 C-terminal domain of RNA polymerase alpha subunit
1 1 1 0 SCOP 51344 Epsilon subunit of F1F0-ATP synthase N-terminal domain
1 1 1 0 SCOP 55658 L9 N-domain-like
1 1 1 1 SCOP 68923 PEP carboxykinase N-terminal domain
1 1 1 1 SCOP 82679 N-utilization substance G protein NusG, N-terminal domain
1 1 1 0 SCOP 55190 Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
1 1 1 0 SCOP 69055 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
1 1 1 1 SCOP 56037 PheT/TilS domain
1 1 1 0 SCOP 47090 PGBD-like
1 1 1 0 SCOP 48334 DNA repair protein MutS, domain III
1 1 1 0 SCOP 58014 Coiled-coil domain of nucleotide exchange factor GrpE
1 1 1 0 SCOP 55383 Copper amine oxidase, domain N
1 1 1 1 SCOP 55307 Tubulin C-terminal domain-like
1 1 1 1 SCOP 140990 FtsH protease domain-like
1 1 1 0 SCOP 48163 An anticodon-binding domain of class I aminoacyl-tRNA synthetases
1 1 1 1 SCOP 143968 UbiD C-terminal domain-like
1 1 1 1 SCOP 52021 Carbamoyl phosphate synthetase, small subunit N-terminal domain
1 1 1 1 SCOP 54826 Enolase N-terminal domain-like
1 1 1 1 SCOP 52029 GroEL apical domain-like
1 1 1 0 SCOP 68912 Rho N-terminal domain-like
1 1 1 1 SCOP 54810 GMP synthetase C-terminal dimerisation domain
1 1 1 1 SCOP 101904 GyrA/ParC C-terminal domain-like
1 1 1 0 SCOP 48300 Ribosomal protein L7/12, oligomerisation (N-terminal) domain
1 1 1 1 SCOP 100920 Heat shock protein 70kD (HSP70), peptide-binding domain
1 1 1 0 SCOP 141322 NfeD domain-like
1 1 1 0 SCOP 48674 Fe-only hydrogenase smaller subunit
1 1 1 0 SCOP 110997 Sporulation related repeat
1 1 1 0 SCOP 46934 UBA-like
1 1 1 0 SCOP 46604 Epsilon subunit of F1F0-ATP synthase C-terminal domain
1 1 1 0 SCOP 100879 Lesion bypass DNA polymerase (Y-family), little finger domain
1 1 1 0 SCOP 69075 Glutamyl tRNA-reductase dimerization domain
1 1 1 0 SCOP 141259 CarD-like
1 1 1 0 SCOP 54373 FAD-linked reductases, C-terminal domain
1 1 1 0 SCOP 82861 Mechanosensitive channel protein MscS (YggB), transmembrane region
1 1 1 0 SCOP 74942 YhbC-like, C-terminal domain
1 1 1 0 SCOP 117892 Band 7/SPFH domain
1 1 1 0 SCOP 75420 YhbC-like, N-terminal domain
1 1 1 0 SCOP 54752 RecA protein, C-terminal domain
1 1 1 0 SCOP 100934 Heat shock protein 70kD (HSP70), C-terminal subdomain
1 1 1 0 SCOP 54782 Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
1 1 1 0 SCOP 102735 Trigger factor ribosome-binding domain
1 1 1 1 SCOP 143975 IlvD/EDD N-terminal domain-like
1 1 1 0 SCOP 54680 Pyrimidine nucleoside phosphorylase C-terminal domain
1 1 1 0 SCOP 46557 GreA transcript cleavage protein, N-terminal domain
1 1 1 0 SCOP 47807 5' to 3' exonuclease, C-terminal subdomain
1 1 1 1 SCOP 47446 Signal peptide-binding domain
1 1 1 0 SCOP 54991 Anticodon-binding domain of PheRS
1 1 1 0 SCOP 55048 Probable ACP-binding domain of malonyl-CoA ACP transacylase
1 1 1 0 SCOP 47928 N-terminal domain of the delta subunit of the F1F0-ATP synthase
1 1 1 1 SCOP 48108 Carbamoyl phosphate synthetase, large subunit connection domain
1 1 1 1 SCOP 82051 Obg GTP-binding protein N-terminal domain
1 1 1 0 SCOP 143724 PHP14-like
1 1 1 1 SCOP 142019 Nqo1 FMN-binding domain-like
1 1 1 1 SCOP 54368 Glutamine synthetase, N-terminal domain
1 1 1 0 SCOP 55261 GAD domain-like
1 1 1 0 SCOP 47757 Chemotaxis receptor methyltransferase CheR, N-terminal domain
1 1 1 1 SCOP 54713 Elongation factor Ts (EF-Ts), dimerisation domain
1 1 1 1 SCOP 64158 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain
1 1 1 1 SCOP 51649 RuBisCo, C-terminal domain
1 1 1 1 SCOP 54966 RuBisCO, large subunit, small (N-terminal) domain
1 1 1 1 SCOP 54747 Ribosomal L11/L12e N-terminal domain
1 1 1 0 SCOP 117018 ATP-dependent DNA ligase DNA-binding domain
1 1 1 0 SCOP 69742 Glutamyl tRNA-reductase catalytic, N-terminal domain
1 1 1 0 SCOP 75553 Smc hinge domain
1 1 1 0 SCOP 75615 Siroheme synthase middle domains-like
1 1 1 1 SCOP 81886 Helical scaffold and wing domains of SecA
1 1 1 0 SCOP 54849 GroEL-intermediate domain like
1 1 1 0 SCOP 56194 Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
1 1 1 0 SCOP 89000 post-HMGL domain-like
1 1 1 0 SCOP 52156 Initiation factor IF2/eIF5b, domain 3
1 1 1 0 SCOP 51064 Head domain of nucleotide exchange factor GrpE
1 1 1 0 SCOP 55653 Ribosomal protein L9 C-domain
1 1 1 0 SCOP 101790 Aminomethyltransferase beta-barrel domain
1 1 1 0 SCOP 143517 TRCF domain-like
1 1 1 1 SCOP 101353 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
1 1 1 1 SCOP 56553 Insert subdomain of RNA polymerase alpha subunit
1 1 1 0 SCOP 160467 PH0987 N-terminal domain-like
1 1 1 1 SCOP 101821 Aminopeptidase/glucanase lid domain
1 1 1 0 SCOP 54364 Translation initiation factor IF3, N-terminal domain
1 1 1 1 SCOP 69705 Transcription factor NusA, N-terminal domain
1 1 1 1 SCOP 81767 Pre-protein crosslinking domain of SecA
1 1 1 0 SCOP 140356 PPK N-terminal domain-like
1 1 1 0 SCOP 81799 Putative methyltransferase TM0872, insert domain
1 1 1 0 SCOP 82829 MesJ substrate recognition domain-like
1 1 1 0 SCOP 55052 CheY-binding domain of CheA
1 1 1 0 SCOP 46915 Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3

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The following superfamilies have one or more weak hits:

SCOP superfamily Myosin rod fragments
SCOP superfamily FYSH domain
SCOP superfamily HesB-like domain
SCOP superfamily Apolipoprotein A-II
SCOP superfamily Zn-finger domain of Sec23/24
SCOP superfamily beta-sandwich domain of Sec23/24
SCOP superfamily Iron-sulfur subunit of formate dehydrogenase N, transmembrane anchor
SCOP superfamily Photosystem I subunits PsaA/PsaB
SCOP superfamily Bacterial photosystem II reaction centre, L and M subunits
SCOP superfamily Cytochrome c oxidase subunit I-like
SCOP superfamily Aquaporin-like
SCOP superfamily Gated mechanosensitive channel
SCOP superfamily Family A G protein-coupled receptor-like
SCOP superfamily Mitotic arrest deficient-like 1, Mad1
SCOP superfamily RecG, N-terminal domain
SCOP superfamily BAG domain
SCOP superfamily RNA polymerase subunits
SCOP superfamily Bacterial hemolysins
SCOP superfamily Rotavirus nonstructural proteins
SCOP superfamily Tropomyosin
SCOP superfamily Leucine zipper domain
SCOP superfamily Invertebrate chitin-binding proteins
SCOP superfamily Neurotoxin B-IV
SCOP superfamily Aerolisin/ETX pore-forming domain
SCOP superfamily Colicin
SCOP superfamily Prim-pol domain
SCOP superfamily HPr-like
SCOP superfamily Protease propeptides/inhibitors
SCOP superfamily DNA damage-inducible protein DinI
SCOP superfamily SecB-like
SCOP superfamily Cystatin/monellin
SCOP superfamily Methylated DNA-protein cysteine methyltransferase domain
SCOP superfamily Cobalamin (vitamin B12)-dependent enzymes
SCOP superfamily Pectin lyase-like
SCOP superfamily Carbohydrate binding domain
SCOP superfamily Galactose oxidase, central domain
SCOP superfamily Thermostable phytase (3-phytase)
SCOP superfamily Baculovirus p35 protein
SCOP superfamily Spermadhesin, CUB domain
SCOP superfamily Carbohydrate-binding domain
SCOP superfamily Invasin/intimin cell-adhesion fragments
SCOP superfamily Tetracyclin repressor-like, C-terminal domain
SCOP superfamily Sec7 domain
SCOP superfamily GTPase activation domain, GAP
SCOP superfamily Acid phosphatase/Vanadium-dependent haloperoxidase
SCOP superfamily DBL homology domain (DH-domain)
SCOP superfamily ERP29 C domain-like
SCOP superfamily Ribbon-helix-helix
SCOP superfamily EF-hand
SCOP superfamily Spectrin repeat
SCOP superfamily CRAL/TRIO N-terminal domain
SCOP superfamily DNA helicase RuvA subunit, C-terminal domain
SCOP superfamily Prefoldin
SCOP superfamily PsbZ-like
SCOP superfamily Poly(A) polymerase catalytic subunit-like
SCOP superfamily SMI1/KNR4-like
SCOP superfamily BT0923-like
SCOP superfamily V-type ATPase subunit E-like
SCOP superfamily BLRF2-like
SCOP superfamily Bacterial polysaccharide co-polymerase-like
SCOP superfamily NMB0488-like
SCOP superfamily TBP-interacting protein-like
SCOP superfamily Plus3-like
SCOP superfamily SMc04008-like
SCOP superfamily HIT/MYND zinc finger-like
SCOP superfamily CSL zinc finger
SCOP superfamily PilZ domain-like
SCOP superfamily YidB-like
SCOP superfamily Vacuolar ATP synthase subunit C
SCOP superfamily TrkA C-terminal domain-like
SCOP superfamily eIF-2-alpha, C-terminal domain
SCOP superfamily Hypothetical protein MG354
SCOP superfamily PAZ domain
SCOP superfamily Superantigen MAM

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