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Yersinia enterocolitica subsp. palearctica 105.5R(r) superfamily assignments

Taxonomy
Taxonomy browser entry

Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Yersiniaceae; Yersinia; Yersinia enterocolitica; Yersinia enterocolitica subsp. palearctica; Yersinia enterocolitica subsp. palearctica 105.5R(r)

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Fasta format sequences
Domain assignments


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Assignment statistics

Sequences: 4022 total
2818 (70 %) with assignment
313 average length
65 % amino acid coverage
Domains: 4103 total
829 unique superfamilies
962 unique families
291 average length
4.9 average superfamily size
80 % formed by duplication
Domain combinations: 543 domain pairs
1235 unique architectures

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Superfamily assignments

Domains

Proteins

Architectures

Families

SCOP link

Superfamilies

279 247 66 11 SCOP 52540 P-loop containing nucleoside triphosphate hydrolases
109 107 25 10 SCOP 46785 "Winged helix" DNA-binding domain
94 93 33 11 SCOP 51735 NAD(P)-binding Rossmann-fold domains
90 89 12 1 SCOP 53850 Periplasmic binding protein-like II
62 57 6 1 SCOP 161098 MetI-like
60 59 5 2 SCOP 103473 MFS general substrate transporter
55 47 18 1 SCOP 46689 Homeodomain-like
52 39 22 5 SCOP 50249 Nucleic acid-binding proteins
49 31 11 8 SCOP 53067 Actin-like ATPase domain
49 48 11 19 SCOP 53335 S-adenosyl-L-methionine-dependent methyltransferases
47 46 6 7 SCOP 53383 PLP-dependent transferases
42 40 13 1 SCOP 52172 CheY-like
37 37 7 0 SCOP 47413 lambda repressor-like DNA-binding domains
35 35 4 1 SCOP 53822 Periplasmic binding protein-like I
34 34 7 6 SCOP 52833 Thioredoxin-like
32 32 23 3 SCOP 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
31 31 9 4 SCOP 55729 Acyl-CoA N-acyltransferases (Nat)
31 31 8 2 SCOP 46894 C-terminal effector domain of the bipartite response regulators
30 30 7 8 SCOP 56784 HAD-like
30 20 7 1 SCOP 103481 Multidrug resistance efflux transporter EmrE
29 19 17 0 SCOP 55785 PYP-like sensor domain (PAS domain)
26 13 5 6 SCOP 52518 Thiamin diphosphate-binding fold (THDP-binding)
26 22 7 3 SCOP 48452 TPR-like
25 24 12 5 SCOP 51905 FAD/NAD(P)-binding domain
25 25 6 5 SCOP 53098 Ribonuclease H-like
25 22 18 7 SCOP 54211 Ribosomal protein S5 domain 2-like
23 23 4 4 SCOP 56935 Porins
21 21 5 6 SCOP 53474 alpha/beta-Hydrolases
21 15 11 4 SCOP 55021 ACT-like
21 21 14 1 SCOP 47384 Homodimeric domain of signal transducing histidine kinase
20 20 3 5 SCOP 53756 UDP-Glycosyltransferase/glycogen phosphorylase
20 6 2 1 SCOP 82693 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
19 19 6 5 SCOP 53448 Nucleotide-diphospho-sugar transferases
18 18 3 5 SCOP 51569 Aldolase
18 18 14 3 SCOP 52374 Nucleotidylyl transferase
18 18 3 3 SCOP 102114 Radical SAM enzymes
17 15 5 5 SCOP 100950 NagB/RpiA/CoA transferase-like
17 17 10 4 SCOP 51445 (Trans)glycosidases
17 17 5 4 SCOP 51182 RmlC-like cupins
17 13 6 1 SCOP 111369 HlyD-like secretion proteins
17 14 6 6 SCOP 48179 6-phosphogluconate dehydrogenase C-terminal domain-like
16 16 5 3 SCOP 53697 SIS domain
16 15 10 4 SCOP 52402 Adenine nucleotide alpha hydrolases-like
16 16 11 3 SCOP 55681 Class II aaRS and biotin synthetases
16 16 7 3 SCOP 56601 beta-lactamase/transpeptidase-like
15 15 6 11 SCOP 51556 Metallo-dependent hydrolases
15 15 6 1 SCOP 54862 4Fe-4S ferredoxins
15 15 6 4 SCOP 53187 Zn-dependent exopeptidases
15 14 11 2 SCOP 50447 Translation proteins
15 15 11 1 SCOP 55073 Nucleotide cyclase
15 8 2 2 SCOP 53901 Thiolase-like
15 15 2 0 SCOP 49401 Bacterial adhesins
15 9 4 1 SCOP 82866 Multidrug efflux transporter AcrB transmembrane domain
14 13 4 3 SCOP 55811 Nudix
14 14 3 3 SCOP 54909 Dimeric alpha+beta barrel
13 12 7 3 SCOP 56059 Glutathione synthetase ATP-binding domain-like
13 13 8 3 SCOP 52317 Class I glutamine amidotransferase-like
13 13 2 5 SCOP 52218 Flavoproteins
13 12 2 1 SCOP 81345 ABC transporter involved in vitamin B12 uptake, BtuC
13 13 9 2 SCOP 53955 Lysozyme-like
13 13 3 1 SCOP 90123 ABC transporter transmembrane region
13 13 5 4 SCOP 55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
12 12 4 4 SCOP 53613 Ribokinase-like
12 12 4 4 SCOP 55120 Pseudouridine synthase
12 11 4 3 SCOP 52096 ClpP/crotonase
12 11 7 2 SCOP 54534 FKBP-like
12 12 7 0 SCOP 54631 CBS-domain pair
12 12 1 3 SCOP 53807 "Helical backbone" metal receptor
12 8 3 1 SCOP 88659 Sigma3 and sigma4 domains of RNA polymerase sigma factors
12 12 3 1 SCOP 49354 PapD-like
12 6 2 1 SCOP 82714 Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
11 10 4 2 SCOP 50129 GroES-like
11 11 3 1 SCOP 53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes
11 10 4 5 SCOP 54637 Thioesterase/thiol ester dehydrase-isomerase
11 10 6 2 SCOP 109604 HD-domain/PDEase-like
11 11 4 4 SCOP 51197 Clavaminate synthase-like
11 10 8 2 SCOP 55781 GAF domain-like
11 11 6 0 SCOP 141868 EAL domain-like
11 11 4 3 SCOP 52467 DHS-like NAD/FAD-binding domain
11 4 3 2 SCOP 63411 LuxS/MPP-like metallohydrolase
11 10 2 1 SCOP 50331 MOP-like
11 7 5 1 SCOP 54980 EF-G C-terminal domain-like
11 11 6 1 SCOP 58104 Methyl-accepting chemotaxis protein (MCP) signaling domain
11 9 2 0 SCOP 159871 YdgH-like
10 10 5 5 SCOP 51621 Phosphoenolpyruvate/pyruvate domain
10 10 4 1 SCOP 56349 DNA breaking-rejoining enzymes
10 10 4 2 SCOP 50692 ADC-like
10 8 4 1 SCOP 51338 Composite domain of metallo-dependent hydrolases
10 10 4 1 SCOP 53706 Formate dehydrogenase/DMSO reductase, domains 1-3
10 9 4 3 SCOP 52440 PreATP-grasp domain
10 10 2 0 SCOP 49584 Periplasmic chaperone C-domain
10 6 6 1 SCOP 51120 beta-Roll
9 9 3 1 SCOP 53790 Tetrapyrrole methylase
9 9 4 1 SCOP 56112 Protein kinase-like (PK-like)
9 8 2 5 SCOP 51366 Ribulose-phoshate binding barrel
9 9 3 2 SCOP 55174 Alpha-L RNA-binding motif
9 9 3 6 SCOP 51161 Trimeric LpxA-like enzymes
9 9 6 3 SCOP 56235 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
9 8 5 1 SCOP 56317 Carbon-nitrogen hydrolase
9 9 6 2 SCOP 51126 Pectin lyase-like
9 9 3 1 SCOP 55604 Glucose permease domain IIB
9 9 5 3 SCOP 56176 FAD-binding/transporter-associated domain-like
9 5 3 0 SCOP 116726 TrkA C-terminal domain-like
9 8 7 3 SCOP 63380 Riboflavin synthase domain-like
9 3 2 0 SCOP 53738 Phosphoglucomutase, first 3 domains
8 8 3 2 SCOP 53271 PRTase-like
8 8 4 3 SCOP 56300 Metallo-dependent phosphatases
8 8 5 4 SCOP 75217 alpha/beta knot
8 8 3 2 SCOP 53720 ALDH-like
8 8 2 1 SCOP 56281 Metallo-hydrolase/oxidoreductase
8 8 1 1 SCOP 64518 Phase 1 flagellin
8 8 1 1 SCOP 51430 NAD(P)-linked oxidoreductase
8 6 5 1 SCOP 143414 CcmK-like
8 8 3 1 SCOP 88946 Sigma2 domain of RNA polymerase sigma factors
8 4 3 2 SCOP 49503 Cupredoxins
8 7 5 2 SCOP 81301 Nucleotidyltransferase
8 5 5 2 SCOP 56024 Phospholipase D/nuclease
8 7 7 1 SCOP 47781 RuvA domain 2-like
8 8 7 1 SCOP 46548 alpha-helical ferredoxin
8 8 1 1 SCOP 48498 Tetracyclin repressor-like, C-terminal domain
8 5 4 1 SCOP 50156 PDZ domain-like
8 7 4 1 SCOP 52794 PTS system IIB component-like
8 2 2 1 SCOP 49373 Invasin/intimin cell-adhesion fragments
8 8 2 0 SCOP 141729 FimD N-terminal domain-like
7 7 5 1 SCOP 57716 Glucocorticoid receptor-like (DNA-binding domain)
7 7 4 2 SCOP 55486 Metalloproteases ("zincins"), catalytic domain
7 7 6 2 SCOP 53633 Carbamate kinase-like
7 6 4 2 SCOP 52821 Rhodanese/Cell cycle control phosphatase
7 7 5 2 SCOP 54292 2Fe-2S ferredoxin-like
7 7 3 1 SCOP 51395 FMN-linked oxidoreductases
7 7 4 1 SCOP 51419 PLP-binding barrel
7 7 4 2 SCOP 50182 Sm-like ribonucleoproteins
7 7 3 2 SCOP 50475 FMN-binding split barrel
7 7 4 3 SCOP 53649 Alkaline phosphatase-like
7 4 3 1 SCOP 46626 Cytochrome c
7 7 2 0 SCOP 54001 Cysteine proteinases
7 6 5 5 SCOP 74650 Galactose mutarotase-like
7 7 2 1 SCOP 69635 Type III secretory system chaperone-like
7 7 3 3 SCOP 51998 PFL-like glycyl radical enzymes
7 7 4 1 SCOP 46955 Putative DNA-binding domain
7 7 3 1 SCOP 47598 Ribbon-helix-helix
7 5 4 1 SCOP 57783 Zinc beta-ribbon
7 7 6 2 SCOP 88697 PUA domain-like
7 7 4 1 SCOP 103088 OmpA-like
7 6 4 1 SCOP 55804 Phoshotransferase/anion transport protein
7 7 3 2 SCOP 48295 TrpR-like
7 7 2 2 SCOP 56925 OMPA-like
7 7 1 1 SCOP 47616 GST C-terminal domain-like
6 5 5 3 SCOP 53927 Cytidine deaminase-like
6 6 4 3 SCOP 50104 Translation proteins SH3-like domain
6 6 3 1 SCOP 55920 Creatinase/aminopeptidase
6 6 3 4 SCOP 53659 Isocitrate/Isopropylmalate dehydrogenase-like
6 6 2 2 SCOP 48557 L-aspartase-like
6 6 4 1 SCOP 51261 Duplicated hybrid motif
6 6 2 2 SCOP 53254 Phosphoglycerate mutase-like
6 6 2 1 SCOP 117143 Flagellar hook protein flgE
6 5 5 1 SCOP 81296 E set domains
6 6 6 2 SCOP 47226 Histidine-containing phosphotransfer domain, HPT domain
6 6 3 2 SCOP 88713 Glycoside hydrolase/deacetylase
6 6 3 1 SCOP 52283 Formate/glycerate dehydrogenase catalytic domain-like
6 6 3 1 SCOP 54523 Pili subunits
6 6 2 1 SCOP 56954 Outer membrane efflux proteins (OEP)
6 6 2 1 SCOP 101801 Surface presentation of antigens (SPOA)
6 6 5 3 SCOP 52343 Ferredoxin reductase-like, C-terminal NADP-linked domain
6 6 3 1 SCOP 53244 MurD-like peptide ligases, peptide-binding domain
6 6 6 1 SCOP 47323 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
6 6 3 4 SCOP 53223 Aminoacid dehydrogenase-like, N-terminal domain
6 5 5 1 SCOP 103190 Sensory domain-like
6 6 4 0 SCOP 81665 Calcium ATPase, transmembrane domain M
6 6 5 1 SCOP 51011 Glycosyl hydrolase domain
6 6 3 2 SCOP 53623 MurD-like peptide ligases, catalytic domain
6 5 2 1 SCOP 56042 PurM C-terminal domain-like
6 5 2 1 SCOP 55326 PurM N-terminal domain-like
6 6 4 0 SCOP 81653 Calcium ATPase, transduction domain A
5 5 2 2 SCOP 47240 Ferritin-like
5 5 1 4 SCOP 51658 Xylose isomerase-like
5 5 2 1 SCOP 51695 PLC-like phosphodiesterases
5 5 1 2 SCOP 56655 Carbohydrate phosphatase
5 5 2 2 SCOP 56796 Dehydroquinate synthase-like
5 5 3 1 SCOP 56801 Acetyl-CoA synthetase-like
5 5 4 2 SCOP 56672 DNA/RNA polymerases
5 5 5 1 SCOP 53328 Formyltransferase
5 5 3 1 SCOP 52499 Isochorismatase-like hydrolases
5 5 4 2 SCOP 51306 LexA/Signal peptidase
5 5 1 2 SCOP 54593 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
5 5 4 2 SCOP 52016 LeuD/IlvD-like
5 4 4 1 SCOP 51230 Single hybrid motif
5 5 2 1 SCOP 55166 Hedgehog/DD-peptidase
5 5 3 1 SCOP 82689 Mechanosensitive channel protein MscS (YggB), C-terminal domain
5 5 1 1 SCOP 118215 Proton glutamate symport protein
5 5 2 2 SCOP 51604 Enolase C-terminal domain-like
5 5 2 1 SCOP 48695 Multiheme cytochromes
5 5 5 0 SCOP 103515 Autotransporter
5 5 5 1 SCOP 46565 Chaperone J-domain
5 5 1 1 SCOP 48008 GntR ligand-binding domain-like
5 5 2 1 SCOP 47170 Aspartate receptor, ligand-binding domain
5 5 4 0 SCOP 63520 PTS-regulatory domain, PRD
5 5 2 0 SCOP 54373 FAD-linked reductases, C-terminal domain
5 5 3 1 SCOP 82861 Mechanosensitive channel protein MscS (YggB), transmembrane region
4 4 3 1 SCOP 55594 HPr-like
4 4 2 1 SCOP 53167 Purine and uridine phosphorylases
4 3 3 2 SCOP 54197 HIT-like
4 4 2 3 SCOP 82649 SufE/NifU
4 4 2 3 SCOP 52980 Restriction endonuclease-like
4 4 1 1 SCOP 47729 IHF-like DNA-binding proteins
4 4 2 2 SCOP 55821 YrdC/RibB
4 4 2 3 SCOP 48150 DNA-glycosylase
4 4 2 1 SCOP 89360 HesB-like domain
4 4 1 1 SCOP 55298 YjgF-like
4 4 1 1 SCOP 75169 DsrEFH-like
4 4 3 1 SCOP 52799 (Phosphotyrosine protein) phosphatases II
4 4 3 2 SCOP 50891 Cyclophilin-like
4 4 1 0 SCOP 48317 Acid phosphatase/Vanadium-dependent haloperoxidase
4 4 4 1 SCOP 49785 Galactose-binding domain-like
4 4 1 3 SCOP 52972 ITPase-like
4 4 1 1 SCOP 81343 Fumarate reductase respiratory complex transmembrane subunits
4 2 2 0 SCOP 55008 HMA, heavy metal-associated domain
4 4 1 4 SCOP 55909 Pentein
4 4 2 1 SCOP 55620 Tetrahydrobiopterin biosynthesis enzymes-like
4 4 2 0 SCOP 52091 SpoIIaa-like
4 4 3 1 SCOP 50494 Trypsin-like serine proteases
4 4 2 3 SCOP 54913 GlnB-like
4 4 3 2 SCOP 50800 PK beta-barrel domain-like
4 3 3 1 SCOP 54814 Prokaryotic type KH domain (KH-domain type II)
4 4 2 2 SCOP 64288 Chorismate lyase-like
4 4 3 1 SCOP 53062 PTS system fructose IIA component-like
4 4 1 1 SCOP 74653 TolA/TonB C-terminal domain
4 4 3 1 SCOP 50465 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
4 4 2 1 SCOP 55424 FAD/NAD-linked reductases, dimerisation (C-terminal) domain
4 4 4 0 SCOP 52743 Subtilisin-like
4 3 2 0 SCOP 69279 Phage tail proteins
4 4 1 1 SCOP 51246 Rudiment single hybrid motif
4 3 3 0 SCOP 49695 gamma-Crystallin-like
4 4 3 0 SCOP 48230 Chondroitin AC/alginate lyase
4 3 3 1 SCOP 56014 Nitrite and sulphite reductase 4Fe-4S domain-like
4 2 2 0 SCOP 54106 LysM domain
4 4 2 1 SCOP 160544 EscU C-terminal domain-like
4 4 2 2 SCOP 48019 post-AAA+ oligomerization domain-like
4 4 3 1 SCOP 56719 Type II DNA topoisomerase
4 4 3 2 SCOP 52922 TK C-terminal domain-like
4 4 3 0 SCOP 158472 HAMP domain-like
4 2 1 0 SCOP 53681 Aspartate/glutamate racemase
4 3 3 1 SCOP 52210 Succinyl-CoA synthetase domains
4 2 1 1 SCOP 48029 FliG
4 4 2 2 SCOP 50621 Alanine racemase C-terminal domain-like
4 4 1 1 SCOP 54826 Enolase N-terminal domain-like
4 4 3 3 SCOP 140591 Type III secretion system domain
4 4 1 1 SCOP 55031 Bacterial exopeptidase dimerisation domain
4 4 2 1 SCOP 55904 Ornithine decarboxylase C-terminal domain
4 4 3 2 SCOP 81271 TGS-like
4 2 2 0 SCOP 49493 HSP40/DnaJ peptide-binding domain
3 3 1 1 SCOP 81338 Aquaporin-like
3 3 2 1 SCOP 57829 Zn-binding ribosomal proteins
3 3 3 0 SCOP 69593 Glycerol-3-phosphate (1)-acyltransferase
3 3 1 2 SCOP 143800 L28p-like
3 3 1 1 SCOP 75620 Release factor
3 3 3 2 SCOP 109998 Triger factor/SurA peptide-binding domain-like
3 3 2 2 SCOP 56770 HydA/Nqo6-like
3 3 1 0 SCOP 54285 MoaD/ThiS
3 3 3 3 SCOP 54060 His-Me finger endonucleases
3 3 2 1 SCOP 143744 GlcG-like
3 2 2 2 SCOP 51726 UROD/MetE-like
3 3 3 1 SCOP 88723 PIN domain-like
3 3 2 2 SCOP 54427 NTF2-like
3 3 1 1 SCOP 56322 ADC synthase
3 3 1 1 SCOP 69572 Activating enzymes of the ubiquitin-like proteins
3 2 2 2 SCOP 47819 HRDC-like
3 3 1 1 SCOP 53639 AraD/HMP-PK domain-like
3 3 1 0 SCOP 56399 ADP-ribosylation
3 3 2 1 SCOP 52151 FabD/lysophospholipase-like
3 3 1 1 SCOP 81342 Transmembrane di-heme cytochromes
3 3 3 1 SCOP 52954 Class II aaRS ABD-related
3 3 1 1 SCOP 143011 RelE-like
3 3 3 0 SCOP 50341 CheW-like
3 3 3 1 SCOP 46767 Methylated DNA-protein cysteine methyltransferase, C-terminal domain
3 3 3 1 SCOP 89550 PHP domain-like
3 3 2 1 SCOP 161111 Cation efflux protein transmembrane domain-like
3 3 2 2 SCOP 56762 HydB/Nqo4-like
3 3 3 2 SCOP 53218 Molybdenum cofactor biosynthesis proteins
3 3 3 1 SCOP 53732 Aconitase iron-sulfur domain
3 3 2 1 SCOP 56219 DNase I-like
3 2 2 0 SCOP 101386 all-alpha NTP pyrophosphatases
3 3 3 3 SCOP 52335 Methylglyoxal synthase-like
3 3 3 1 SCOP 52242 Cobalamin (vitamin B12)-binding domain
3 3 2 3 SCOP 51703 Cobalamin (vitamin B12)-dependent enzymes
3 2 2 1 SCOP 81593 Nucleotidyltransferase substrate binding subunit/domain
3 3 2 1 SCOP 55846 N-acetylmuramoyl-L-alanine amidase-like
3 3 3 0 SCOP 82171 DPP6 N-terminal domain-like
3 3 2 2 SCOP 55136 Probable bacterial effector-binding domain
3 3 3 1 SCOP 55186 ThrRS/AlaRS common domain
3 3 2 0 SCOP 141523 L,D-transpeptidase catalytic domain-like
3 3 1 1 SCOP 53092 Creatinase/prolidase N-terminal domain
3 3 2 0 SCOP 46589 tRNA-binding arm
3 1 1 1 SCOP 55979 DNA clamp
3 3 1 1 SCOP 54857 DNA damage-inducible protein DinI
3 3 2 1 SCOP 81923 Double Clp-N motif
3 3 2 1 SCOP 52728 PTS IIb component
3 3 1 2 SCOP 144064 Heme iron utilization protein-like
3 3 1 0 SCOP 46973 Enzyme IIa from lactose specific PTS, IIa-lac
3 3 3 1 SCOP 52009 Phosphohistidine domain
3 1 1 1 SCOP 55973 S-adenosylmethionine synthetase
3 3 2 1 SCOP 52418 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
3 3 2 0 SCOP 47090 PGBD-like
3 3 1 2 SCOP 55060 GHMP Kinase, C-terminal domain
3 3 2 0 SCOP 81891 Poly A polymerase C-terminal region-like
3 3 2 1 SCOP 56425 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
3 3 1 0 SCOP 81660 Metal cation-transporting ATPase, ATP-binding domain N
3 3 2 1 SCOP 46977 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
3 3 2 1 SCOP 110997 Sporulation related repeat
3 3 1 0 SCOP 54621 Heme-binding protein A (HasA)
3 3 2 1 SCOP 47648 Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
3 3 1 2 SCOP 56327 LDH C-terminal domain-like
3 3 1 1 SCOP 51984 MurCD N-terminal domain
3 3 3 1 SCOP 47831 Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
3 3 2 0 SCOP 117892 Band 7/SPFH domain
3 2 2 1 SCOP 55124 Nitrite/Sulfite reductase N-terminal domain-like
3 3 3 1 SCOP 50677 ValRS/IleRS/LeuRS editing domain
3 3 2 0 SCOP 55957 Phosphoglucomutase, C-terminal domain
3 3 3 1 SCOP 142019 Nqo1 FMN-binding domain-like
3 3 2 1 SCOP 64449 YopH tyrosine phosphatase N-terminal domain
3 2 2 1 SCOP 55666 Ribonuclease PH domain 2-like
3 3 1 0 SCOP 56519 Penicillin binding protein dimerisation domain
2 2 2 2 SCOP 48013 NusB-like
2 2 2 1 SCOP 142433 CinA-like
2 2 1 2 SCOP 111331 NAD kinase/diacylglycerol kinase-like
2 2 1 1 SCOP 53137 Translational machinery components
2 2 2 1 SCOP 46946 S13-like H2TH domain
2 2 2 0 SCOP 56214 4'-phosphopantetheinyl transferase
2 2 1 0 SCOP 89447 AbrB/MazE/MraZ-like
2 2 2 2 SCOP 53597 Dihydrofolate reductase-like
2 2 1 1 SCOP 47336 ACP-like
2 2 2 1 SCOP 109755 PhoU-like
2 2 1 2 SCOP 82784 OsmC-like
2 2 1 2 SCOP 64484 beta and beta-prime subunits of DNA dependent RNA-polymerase
2 2 2 2 SCOP 51730 FAD-linked oxidoreductase
2 2 1 1 SCOP 111283 Putative modulator of DNA gyrase, PmbA/TldD
2 2 1 1 SCOP 51283 dUTPase-like
2 2 2 2 SCOP 50715 Ribosomal protein L25-like
2 2 2 1 SCOP 51412 Inosine monophosphate dehydrogenase (IMPDH)
2 2 1 1 SCOP 55205 EPT/RTPC-like
2 2 1 0 SCOP 140566 FlgN-like
2 2 1 1 SCOP 82657 BolA-like
2 2 1 1 SCOP 64307 SirA-like
2 2 2 1 SCOP 50685 Barwin-like endoglucanases
2 2 1 1 SCOP 48576 Terpenoid synthases
2 2 1 0 SCOP 49764 HSP20-like chaperones
2 2 1 0 SCOP 48371 ARM repeat
2 2 2 0 SCOP 55315 L30e-like
2 2 1 0 SCOP 55469 FMN-dependent nitroreductase-like
2 2 1 2 SCOP 54506 Diaminopimelate epimerase-like
2 2 1 1 SCOP 53774 Glutaminase/Asparaginase
2 2 1 1 SCOP 56752 D-aminoacid aminotransferase-like PLP-dependent enzymes
2 2 1 0 SCOP 49899 Concanavalin A-like lectins/glucanases
2 2 2 1 SCOP 48208 Six-hairpin glycosidases
2 2 1 1 SCOP 53056 beta-carbonic anhydrase, cab
2 2 1 2 SCOP 53800 Chelatase
2 2 2 1 SCOP 101960 Stabilizer of iron transporter SufD
2 2 2 2 SCOP 55931 Glutamine synthetase/guanido kinase
2 2 1 0 SCOP 102405 MCP/YpsA-like
2 2 1 0 SCOP 143243 Nqo5-like
2 2 2 1 SCOP 51717 Dihydropteroate synthetase-like
2 2 2 0 SCOP 55718 SCP-like
2 2 1 1 SCOP 64438 CNF1/YfiH-like putative cysteine hydrolases
2 2 2 0 SCOP 82771 GIY-YIG endonuclease
2 2 1 0 SCOP 51679 Bacterial luciferase-like
2 2 1 0 SCOP 160246 EspE N-terminal domain-like
2 2 1 1 SCOP 50022 ISP domain
2 2 1 0 SCOP 53300 vWA-like
2 2 2 0 SCOP 158682 TerB-like
2 2 2 1 SCOP 55154 CYTH-like phosphatases
2 2 2 1 SCOP 52507 Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
2 2 1 1 SCOP 81340 Clc chloride channel
2 2 1 1 SCOP 51206 cAMP-binding domain-like
2 2 1 1 SCOP 47345 Colicin E immunity proteins
2 2 2 2 SCOP 54736 ClpS-like
2 2 2 1 SCOP 159894 YgaC/TfoX-N like
2 2 2 0 SCOP 54975 Acylphosphatase/BLUF domain-like
2 2 1 0 SCOP 160719 gpW/gp25-like
2 2 2 1 SCOP 51391 Thiamin phosphate synthase
2 2 2 0 SCOP 51004 C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
2 2 2 0 SCOP 48600 Chorismate mutase II
2 2 1 2 SCOP 89392 Prokaryotic lipoproteins and lipoprotein localization factors
2 2 2 1 SCOP 55826 YbaK/ProRS associated domain
2 2 1 0 SCOP 56645 Acyl-CoA dehydrogenase NM domain-like
2 2 1 1 SCOP 103025 Folate-binding domain
2 2 1 0 SCOP 159594 XCC0632-like
2 2 2 0 SCOP 140931 Fic-like
2 2 2 1 SCOP 50037 C-terminal domain of transcriptional repressors
2 2 1 0 SCOP 117457 FumA C-terminal domain-like
2 2 1 2 SCOP 50814 Lipocalins
2 2 1 0 SCOP 101116 Flagellar export chaperone FliS
2 2 2 0 SCOP 53041 Resolvase-like
2 2 2 1 SCOP 50486 FMT C-terminal domain-like
2 2 1 1 SCOP 53163 HybD-like
2 2 1 0 SCOP 159127 HupF/HypC-like
2 1 1 1 SCOP 89963 YajQ-like
2 2 1 1 SCOP 89155 TorD-like
2 2 1 1 SCOP 69754 Ribosome binding protein Y (YfiA homologue)
2 2 1 0 SCOP 101498 Anti-sigma factor FlgM
2 2 1 1 SCOP 75005 Arabinanase/levansucrase/invertase
2 2 2 1 SCOP 56091 DNA ligase/mRNA capping enzyme, catalytic domain
2 2 2 1 SCOP 52777 CoA-dependent acyltransferases
2 2 1 0 SCOP 47203 Acyl-CoA dehydrogenase C-terminal domain-like
2 2 1 0 SCOP 143865 CorA soluble domain-like
2 1 1 0 SCOP 160113 YegP-like
2 2 2 1 SCOP 56712 Prokaryotic type I DNA topoisomerase
2 2 1 2 SCOP 51690 Nicotinate/Quinolinate PRTase C-terminal domain-like
2 2 2 1 SCOP 55103 FAD-linked oxidases, C-terminal domain
2 2 2 0 SCOP 50370 Ricin B-like lectins
2 1 1 1 SCOP 81273 H-NS histone-like proteins
2 2 1 1 SCOP 52935 PK C-terminal domain-like
2 2 2 1 SCOP 51971 Nucleotide-binding domain
2 2 2 0 SCOP 49265 Fibronectin type III
2 2 2 1 SCOP 55816 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
2 2 2 0 SCOP 82679 N-utilization substance G protein NusG, N-terminal domain
2 2 2 1 SCOP 56037 PheT/TilS domain
2 2 2 1 SCOP 51215 Regulatory protein AraC
2 2 2 1 SCOP 161093 MgtE membrane domain-like
2 2 1 1 SCOP 53671 Aspartate/ornithine carbamoyltransferase
2 2 1 0 SCOP 140129 MxiH-like
2 2 2 0 SCOP 142984 Nqo1 middle domain-like
2 2 1 1 SCOP 54719 Fe,Mn superoxide dismutase (SOD), C-terminal domain
2 2 2 1 SCOP 143968 UbiD C-terminal domain-like
2 2 2 1 SCOP 52968 B12-dependent dehydatase associated subunit
2 2 1 0 SCOP 46575 DNA polymerase III theta subunit-like
2 2 1 1 SCOP 101904 GyrA/ParC C-terminal domain-like
2 2 1 1 SCOP 143548 Serine metabolism enzymes domain
2 2 1 1 SCOP 100920 Heat shock protein 70kD (HSP70), peptide-binding domain
2 2 2 0 SCOP 46600 C-terminal UvrC-binding domain of UvrB
2 2 1 0 SCOP 144083 Magnesium transport protein CorA, transmembrane region
2 2 1 1 SCOP 160240 Cation efflux protein cytoplasmic domain-like
2 2 1 1 SCOP 63418 MurE/MurF N-terminal domain
2 2 1 1 SCOP 47823 lambda integrase-like, N-terminal domain
2 2 2 1 SCOP 100879 Lesion bypass DNA polymerase (Y-family), little finger domain
2 2 2 1 SCOP 54768 dsRNA-binding domain-like
2 2 1 0 SCOP 57987 Inovirus (filamentous phage) major coat protein
2 1 1 0 SCOP 47794 Rad51 N-terminal domain-like
2 2 2 0 SCOP 53155 Methylated DNA-protein cysteine methyltransferase domain
2 1 1 1 SCOP 56053 Ribosomal protein L6
2 2 1 0 SCOP 52413 UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
2 2 1 1 SCOP 100934 Heat shock protein 70kD (HSP70), C-terminal subdomain
2 1 1 0 SCOP 69369 Cloacin translocation domain
2 2 1 1 SCOP 143975 IlvD/EDD N-terminal domain-like
2 2 1 1 SCOP 46557 GreA transcript cleavage protein, N-terminal domain
2 2 1 1 SCOP 54675 Nicotinate/Quinolinate PRTase N-terminal domain-like
2 2 1 1 SCOP 69189 Penicillin-binding protein associated domain
2 2 2 0 SCOP 47807 5' to 3' exonuclease, C-terminal subdomain
2 2 1 0 SCOP 50615 N-terminal domain of alpha and beta subunits of F1 ATP synthase
2 1 1 0 SCOP 49303 beta-Galactosidase/glucuronidase domain
2 1 1 1 SCOP 54713 Elongation factor Ts (EF-Ts), dimerisation domain
2 2 1 1 SCOP 46609 Fe,Mn superoxide dismutase (SOD), N-terminal domain
2 2 1 1 SCOP 75615 Siroheme synthase middle domains-like
2 2 1 1 SCOP 47917 C-terminal domain of alpha and beta subunits of F1 ATP synthase
2 2 1 1 SCOP 48168 R1 subunit of ribonucleotide reductase, N-terminal domain
2 2 2 0 SCOP 47005 Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
2 2 1 1 SCOP 101790 Aminomethyltransferase beta-barrel domain
2 2 1 0 SCOP 50176 N-terminal domains of the minor coat protein g3p
1 1 1 1 SCOP 56731 DNA primase core
1 1 1 1 SCOP 74982 Small protein B (SmpB)
1 1 1 1 SCOP 56808 Ribosomal protein L1
1 1 1 1 SCOP 53178 Peptidyl-tRNA hydrolase-like
1 1 1 1 SCOP 47973 Ribosomal protein S7
1 1 1 1 SCOP 46911 Ribosomal protein S18
1 1 1 1 SCOP 52141 Uracil-DNA glycosylase-like
1 1 1 1 SCOP 75304 Amidase signature (AS) enzymes
1 1 1 1 SCOP 56420 Peptide deformylase
1 1 1 1 SCOP 82607 YbaB-like
1 1 1 1 SCOP 89919 Ribosome-binding factor A, RbfA
1 1 1 1 SCOP 54999 Ribosomal protein S10
1 1 1 1 SCOP 52166 Ribosomal protein L4
1 1 1 1 SCOP 54189 Ribosomal proteins S24e, L23 and L15e
1 1 1 0 SCOP 54570 Ribosomal protein S19
1 1 1 1 SCOP 54843 Ribosomal protein L22
1 1 1 1 SCOP 54686 Ribosomal protein L16p/L10e
1 1 1 1 SCOP 50193 Ribosomal protein L14
1 1 1 1 SCOP 55282 RL5-like
1 1 1 1 SCOP 56047 Ribosomal protein S8
1 1 1 1 SCOP 52080 Ribosomal proteins L15p and L18e
1 1 1 0 SCOP 103491 Preprotein translocase SecY subunit
1 1 1 0 SCOP 57840 Ribosomal protein L36
1 1 1 1 SCOP 64263 Prokaryotic ribosomal protein L17
1 1 1 1 SCOP 64182 DHH phosphoesterases
1 1 1 1 SCOP 143034 L35p-like
1 1 1 1 SCOP 74731 Ribosomal protein L20
1 1 1 1 SCOP 53784 Phosphofructokinase
1 1 1 1 SCOP 55831 Thymidylate synthase/dCMP hydroxymethylase
1 1 1 1 SCOP 141091 L21p-like
1 1 1 1 SCOP 110324 Ribosomal L27 protein-like
1 1 1 1 SCOP 53748 Phosphoglycerate kinase
1 1 1 1 SCOP 82549 DAK1/DegV-like
1 1 1 1 SCOP 75625 YebC-like
1 1 1 1 SCOP 50324 Inorganic pyrophosphatase
1 1 1 0 SCOP 160369 Ribosomal protein L10-like
1 1 1 1 SCOP 46992 Ribosomal protein S20
1 1 1 0 SCOP 89623 Ribose/Galactose isomerase RpiB/AlsB
1 1 1 1 SCOP 52943 ATP synthase (F1-ATPase), gamma subunit
1 1 1 1 SCOP 81333 F1F0 ATP synthase subunit C
1 1 1 1 SCOP 55068 Peptide methionine sulfoxide reductase
1 1 1 1 SCOP 52161 Ribosomal protein L13
1 1 1 1 SCOP 47060 S15/NS1 RNA-binding domain
1 1 1 1 SCOP 51351 Triosephosphate isomerase (TIM)
1 1 1 1 SCOP 55194 Ribosome recycling factor, RRF
1 1 1 1 SCOP 54565 Ribosomal protein S16
1 1 1 1 SCOP 51316 Mss4-like
1 1 1 1 SCOP 69765 IpsF-like
1 1 1 1 SCOP 54611 SecB-like
1 1 1 1 SCOP 103263 Chorismate synthase, AroC
1 1 1 1 SCOP 111337 QueA-like
1 1 1 1 SCOP 51713 tRNA-guanine transglycosylase
1 1 1 0 SCOP 56276 S-adenosylmethionine decarboxylase
1 1 1 1 SCOP 52313 Ribosomal protein S2
1 1 1 1 SCOP 64005 Undecaprenyl diphosphate synthase
1 1 1 1 SCOP 101322 YcfC-like
1 1 1 1 SCOP 142695 RibA-like
1 1 1 1 SCOP 102705 NIF3 (NGG1p interacting factor 3)-like
1 1 1 0 SCOP 55229 Cell division protein MinE topological specificity domain
1 1 1 1 SCOP 52304 Type II 3-dehydroquinate dehydratase
1 1 1 1 SCOP 117130 CsrA-like
1 1 1 1 SCOP 52121 Lumazine synthase
1 1 1 0 SCOP 69721 DsrC, the gamma subunit of dissimilatory sulfite reductase
1 1 1 1 SCOP 81452 Cytochrome c oxidase subunit III-like
1 1 1 1 SCOP 117991 YbeD/HP0495-like
1 1 1 1 SCOP 55129 Ribosomal protein L30p/L7e
1 1 1 1 SCOP 46561 Ribosomal protein L29 (L29p)
1 1 1 1 SCOP 111148 YggX-like
1 1 1 1 SCOP 54995 Ribosomal protein S6
1 1 1 1 SCOP 55387 Frataxin/Nqo15-like
1 1 1 1 SCOP 56104 SAICAR synthase-like
1 1 1 1 SCOP 52949 Macro domain-like
1 1 1 0 SCOP 63829 Calcium-dependent phosphotriesterase
1 1 1 1 SCOP 48256 Citrate synthase
1 1 1 0 SCOP 48613 Heme oxygenase-like
1 1 1 1 SCOP 69500 DTD-like
1 1 1 1 SCOP 102886 Coproporphyrinogen III oxidase
1 1 1 1 SCOP 56634 Heme-dependent catalase-like
1 1 1 1 SCOP 53590 Nucleoside hydrolase
1 1 1 0 SCOP 48239 Terpenoid cyclases/Protein prenyltransferases
1 1 1 0 SCOP 48403 Ankyrin repeat
1 1 1 0 SCOP 50630 Acid proteases
1 1 1 0 SCOP 55144 LigT-like
1 1 1 0 SCOP 51645 Malate synthase G
1 1 1 1 SCOP 49329 Cu,Zn superoxide dismutase-like
1 1 1 1 SCOP 54919 Nucleoside diphosphate kinase, NDK
1 1 1 0 SCOP 110849 ParB/Sulfiredoxin
1 1 1 1 SCOP 82282 Homocysteine S-methyltransferase
1 1 1 1 SCOP 55257 RBP11-like subunits of RNA polymerase
1 1 1 1 SCOP 56529 FAH
1 1 1 0 SCOP 64153 YjeF N-terminal domain-like
1 1 1 1 SCOP 55159 eIF1-like
1 1 1 0 SCOP 55961 Bet v1-like
1 1 1 1 SCOP 52266 SGNH hydrolase
1 1 1 0 SCOP 69618 HemD-like
1 1 1 1 SCOP 52058 L domain-like
1 1 1 0 SCOP 63562 RPB6/omega subunit-like
1 1 1 1 SCOP 81442 Cytochrome c oxidase subunit I-like
1 1 1 1 SCOP 63965 Precorrin-8X methylmutase CbiC/CobH
1 1 1 0 SCOP 141734 HisI-like
1 1 1 1 SCOP 46458 Globin-like
1 1 1 1 SCOP 144091 Rhomboid-like
1 1 1 0 SCOP 161084 MAPEG domain-like
1 1 1 1 SCOP 51069 Carbonic anhydrase
1 1 1 1 SCOP 55040 Molybdenum cofactor biosynthesis protein C, MoaC
1 1 1 0 SCOP 69118 AhpD-like
1 1 1 1 SCOP 144020 FdhE-like
1 1 1 0 SCOP 81324 Voltage-gated potassium channels
1 1 1 1 SCOP 53795 PEP carboxykinase-like
1 1 1 0 SCOP 103642 Sec-C motif
1 1 1 0 SCOP 102712 JAB1/MPN domain
1 1 1 0 SCOP 55724 Mog1p/PsbP-like
1 1 1 0 SCOP 143120 YefM-like
1 1 1 1 SCOP 118196 YaeB-like
1 1 1 1 SCOP 52255 N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
1 1 1 1 SCOP 111352 Ammonium transporter
1 1 1 0 SCOP 55331 Tautomerase/MIF
1 1 1 1 SCOP 142754 NadA-like
1 1 1 0 SCOP 143100 TTHA1013/TTHA0281-like
1 1 1 1 SCOP 82697 PurS-like
1 1 1 0 SCOP 117916 Fe-S cluster assembly (FSCA) domain-like
1 1 1 1 SCOP 56524 Oxidoreductase molybdopterin-binding domain
1 1 1 1 SCOP 55083 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
1 1 1 1 SCOP 101744 Rof/RNase P subunit-like
1 1 1 1 SCOP 64167 SurE-like
1 1 1 1 SCOP 110857 Gamma-glutamyl cyclotransferase-like
1 1 1 1 SCOP 63892 Pyridoxine 5'-phosphate synthase
1 1 1 1 SCOP 54690 Molybdopterin synthase subunit MoaE
1 1 1 0 SCOP 116842 XseB-like
1 1 1 1 SCOP 110399 ThiG-like
1 1 1 0 SCOP 88874 Receptor-binding domain of short tail fibre protein gp12
1 1 1 1 SCOP 111304 Recombination protein RecR
1 1 1 1 SCOP 117856 AF0104/ALDC/Ptd012-like
1 1 1 0 SCOP 54786 YcfA/nrd intein domain
1 1 1 0 SCOP 49879 SMAD/FHA domain
1 1 1 0 SCOP 50993 Peptidase/esterase 'gauge' domain
1 1 1 1 SCOP 69047 Hypothetical protein YjbJ
1 1 1 1 SCOP 54111 Urease, gamma-subunit
1 1 1 1 SCOP 51278 Urease, beta-subunit
1 1 1 1 SCOP 52733 Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT)
1 1 1 0 SCOP 69065 RNase III domain-like
1 1 1 0 SCOP 159133 EutN/CcmL-like
1 1 1 1 SCOP 55200 Translation initiation factor IF3, C-terminal domain
1 1 1 0 SCOP 117396 TM1631-like
1 1 1 0 SCOP 50952 Soluble quinoprotein glucose dehydrogenase
1 1 1 0 SCOP 82153 FAS1 domain
1 1 1 0 SCOP 158997 Trm112p-like
1 1 1 1 SCOP 53213 LigB-like
1 1 1 1 SCOP 158442 DsbB-like
1 1 1 0 SCOP 102829 Cell division protein ZapA-like
1 1 1 1 SCOP 143456 VC0467-like
1 1 1 1 SCOP 48173 Cryptochrome/photolyase FAD-binding domain
1 1 1 1 SCOP 52425 Cryptochrome/photolyase, N-terminal domain
1 1 1 0 SCOP 50998 Quinoprotein alcohol dehydrogenase-like
1 1 1 1 SCOP 89028 Cobalamin adenosyltransferase-like
1 1 1 1 SCOP 102400 DNA polymerase III chi subunit
1 1 1 0 SCOP 81330 Gated mechanosensitive channel
1 1 1 0 SCOP 109910 YgfY-like
1 1 1 0 SCOP 101307 YutG-like
1 1 1 0 SCOP 159664 CobE/GbiG C-terminal domain-like
1 1 1 1 SCOP 110069 ApaG-like
1 1 1 1 SCOP 53323 Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
1 1 1 1 SCOP 143631 ApbE-like
1 1 1 1 SCOP 56821 Prismane protein-like
1 1 1 1 SCOP 111384 OmpH-like
1 1 1 0 SCOP 75138 HprK N-terminal domain-like
1 1 1 1 SCOP 56507 Methionine synthase activation domain-like
1 1 1 1 SCOP 53182 Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase)
1 1 1 1 SCOP 110738 Glycerate kinase I
1 1 1 1 SCOP 142338 CofD-like
1 1 1 1 SCOP 101327 YgfB-like
1 1 1 1 SCOP 101473 DhaL-like
1 1 1 1 SCOP 111326 Urocanase
1 1 1 1 SCOP 101874 YceI-like
1 1 1 1 SCOP 141130 Acetamidase/Formamidase-like
1 1 1 1 SCOP 160950 YacF-like
1 1 1 1 SCOP 101738 SspB-like
1 1 1 1 SCOP 69786 YggU-like
1 1 1 1 SCOP 140319 IscX-like
1 1 1 1 SCOP 69917 OMPT-like
1 1 1 1 SCOP 142764 YgbK-like
1 1 1 1 SCOP 159709 PhnH-like
1 1 1 1 SCOP 75471 YhbY-like
1 1 1 1 SCOP 74863 Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha)
1 1 1 0 SCOP 103039 CheC-like
1 1 1 1 SCOP 110395 CutC-like
1 1 1 1 SCOP 142906 YjbR-like
1 1 1 0 SCOP 50974 Nitrous oxide reductase, N-terminal domain
1 1 1 0 SCOP 141371 PilZ domain-like
1 1 1 1 SCOP 47175 Cytochromes
1 1 1 1 SCOP 52738 Methylesterase CheB, C-terminal domain
1 1 1 1 SCOP 158710 PSPTO4464-like
1 1 1 0 SCOP 109709 KorB DNA-binding domain-like
1 1 1 1 SCOP 89562 RraA-like
1 1 1 1 SCOP 63592 Flagellar transcriptional activator FlhD
1 1 1 1 SCOP 160930 FlhC-like
1 1 1 1 SCOP 75708 Chemotaxis phosphatase CheZ
1 1 1 1 SCOP 53933 Microbial ribonucleases
1 1 1 0 SCOP 159672 CbiG N-terminal domain-like
1 1 1 0 SCOP 158791 MgtE N-terminal domain-like
1 1 1 1 SCOP 141452 Hcp1-like
1 1 1 1 SCOP 144059 ImpE-like
1 1 1 0 SCOP 69349 Phage fibre proteins
1 1 1 1 SCOP 52038 Barstar-related
1 1 1 1 SCOP 102546 RbsD-like
1 1 1 0 SCOP 50346 PRC-barrel domain
1 1 1 0 SCOP 143437 THUMP domain-like
1 1 1 1 SCOP 52490 Tubulin nucleotide-binding domain-like
1 1 1 0 SCOP 102462 Peptidyl-tRNA hydrolase II
1 1 1 1 SCOP 89946 Hypothetical protein VC0424
1 1 1 1 SCOP 160191 YcgL-like
1 1 1 1 SCOP 63867 MoeA C-terminal domain-like
1 1 1 1 SCOP 101756 Hypothetical protein YgiW
1 1 1 0 SCOP 111364 Tsx-like channel
1 1 1 1 SCOP 69864 Argininosuccinate synthetase, C-terminal domain
1 1 1 1 SCOP 48024 N-terminal domain of DnaB helicase
1 1 1 1 SCOP 158832 Tex N-terminal region-like
1 1 1 1 SCOP 48592 GroEL equatorial domain-like
1 1 1 1 SCOP 69336 Alpha subunit of glutamate synthase, C-terminal domain
1 1 1 1 SCOP 158651 YejL-like
1 1 1 1 SCOP 158452 YqcC-like
1 1 1 0 SCOP 52200 Toll/Interleukin receptor TIR domain
1 1 1 1 SCOP 102816 Putative dsDNA mimic
1 1 1 1 SCOP 158668 MtlR-like
1 1 1 0 SCOP 118001 YehU-like
1 1 1 1 SCOP 102220 DNA polymerase III psi subunit
1 1 1 0 SCOP 141530 PTSIIA/GutA-like
1 1 1 1 SCOP 116960 YfbU-like
1 1 1 1 SCOP 82093 Heme chaperone CcmE
1 1 1 1 SCOP 57938 DnaJ/Hsp40 cysteine-rich domain
1 1 1 0 SCOP 69318 Integrin alpha N-terminal domain
1 1 1 0 SCOP 141488 YdhA-like
1 1 1 0 SCOP 161187 YfgJ-like
1 1 1 1 SCOP 56596 Replication terminator protein (Tus)
1 1 1 1 SCOP 89872 Inhibitor of vertebrate lysozyme, Ivy
1 1 1 1 SCOP 68989 Hemolysin expression modulating protein HHA
1 1 1 1 SCOP 49772 Ecotin, trypsin inhibitor
1 1 1 0 SCOP 82114 Riboflavin kinase-like
1 1 1 1 SCOP 46906 Ribosomal protein L11, C-terminal domain
1 1 1 0 SCOP 160443 SMR domain-like
1 1 1 0 SCOP 69304 Tricorn protease N-terminal domain
1 1 1 1 SCOP 82057 Prokaryotic SH3-related domain
1 1 1 1 SCOP 141255 YccV-like
1 1 1 1 SCOP 102645 CoaB-like
1 1 1 0 SCOP 117281 Kelch motif
1 1 1 0 SCOP 118352 HSP33 redox switch-like
1 1 1 0 SCOP 55890 Sporulation response regulatory protein Spo0B
1 1 1 1 SCOP 56931 Outer membrane phospholipase A (OMPLA)
1 1 1 1 SCOP 54821 Ribosomal protein S3 C-terminal domain
1 1 1 1 SCOP 81573 F1F0 ATP synthase subunit B, membrane domain
1 1 1 0 SCOP 63848 Cell-division inhibitor MinC, C-terminal domain
1 1 1 1 SCOP 160355 Bacterial polysaccharide co-polymerase-like
1 1 1 1 SCOP 109635 DnaK suppressor protein DksA, alpha-hairpin domain
1 1 1 1 SCOP 81935 N-terminal domain of bifunctional PutA protein
1 1 1 1 SCOP 118116 DNA mismatch repair protein MutL
1 1 1 1 SCOP 81336 F1F0 ATP synthase subunit A
1 1 1 0 SCOP 111342 CbiD-like
1 1 1 1 SCOP 47789 C-terminal domain of RNA polymerase alpha subunit
1 1 1 1 SCOP 51344 Epsilon subunit of F1F0-ATP synthase N-terminal domain
1 1 1 0 SCOP 48657 FinO-like
1 1 1 1 SCOP 55658 L9 N-domain-like
1 1 1 1 SCOP 68923 PEP carboxykinase N-terminal domain
1 1 1 1 SCOP 56436 C-type lectin-like
1 1 1 0 SCOP 55190 Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
1 1 1 1 SCOP 69055 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
1 1 1 1 SCOP 48334 DNA repair protein MutS, domain III
1 1 1 1 SCOP 58014 Coiled-coil domain of nucleotide exchange factor GrpE
1 1 1 1 SCOP 81464 Cytochrome c oxidase subunit II-like, transmembrane region
1 1 1 1 SCOP 55307 Tubulin C-terminal domain-like
1 1 1 1 SCOP 140990 FtsH protease domain-like
1 1 1 0 SCOP 141673 MOSC N-terminal domain-like
1 1 1 0 SCOP 47752 Protein HNS-dependent expression A; HdeA
1 1 1 1 SCOP 57884 Ada DNA repair protein, N-terminal domain (N-Ada 10)
1 1 1 1 SCOP 52964 TolB, N-terminal domain
1 1 1 0 SCOP 48163 An anticodon-binding domain of class I aminoacyl-tRNA synthetases
1 1 1 1 SCOP 101967 Adhesin YadA, collagen-binding domain
1 1 1 1 SCOP 52021 Carbamoyl phosphate synthetase, small subunit N-terminal domain
1 1 1 0 SCOP 54791 Eukaryotic type KH-domain (KH-domain type I)
1 1 1 1 SCOP 52029 GroEL apical domain-like
1 1 1 0 SCOP 116927 EspA/CesA-like
1 1 1 0 SCOP 143737 YeeU-like
1 1 1 0 SCOP 68912 Rho N-terminal domain-like
1 1 1 1 SCOP 47148 Diol dehydratase, gamma subunit
1 1 1 1 SCOP 54810 GMP synthetase C-terminal dimerisation domain
1 1 1 0 SCOP 57825 Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain
1 1 1 0 SCOP 57863 ArfGap/RecO-like zinc finger
1 1 1 1 SCOP 47364 Domain of the SRP/SRP receptor G-proteins
1 1 1 0 SCOP 48300 Ribosomal protein L7/12, oligomerisation (N-terminal) domain
1 1 1 0 SCOP 63737 Leukotriene A4 hydrolase N-terminal domain
1 1 1 0 SCOP 141322 NfeD domain-like
1 1 1 1 SCOP 160964 MalF N-terminal region-like
1 1 1 1 SCOP 55252 C-terminal domain of arginine repressor
1 1 1 1 SCOP 47144 HSC20 (HSCB), C-terminal oligomerisation domain
1 1 1 0 SCOP 46934 UBA-like
1 1 1 0 SCOP 158544 GspK insert domain-like
1 1 1 0 SCOP 46604 Epsilon subunit of F1F0-ATP synthase C-terminal domain
1 1 1 0 SCOP 110921 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
1 1 1 0 SCOP 54423 DsbC/DsbG N-terminal domain-like
1 1 1 0 SCOP 69075 Glutamyl tRNA-reductase dimerization domain
1 1 1 1 SCOP 63882 MoeA N-terminal region -like
1 1 1 0 SCOP 52113 BRCT domain
1 1 1 1 SCOP 141259 CarD-like
1 1 1 0 SCOP 74942 YhbC-like, C-terminal domain
1 1 1 0 SCOP 89069 N-terminal, cytoplasmic domain of anti-sigmaE factor RseA
1 1 1 0 SCOP 75516 Pheromone-binding domain of LuxR-like quorum-sensing transcription factors
1 1 1 1 SCOP 48435 Bacterial muramidases
1 1 1 0 SCOP 75420 YhbC-like, N-terminal domain
1 1 1 1 SCOP 81624 N-terminal domain of MutM-like DNA repair proteins
1 1 1 0 SCOP 54752 RecA protein, C-terminal domain
1 1 1 1 SCOP 82808 Replication modulator SeqA, C-terminal DNA-binding domain
1 1 1 1 SCOP 54782 Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
1 1 1 1 SCOP 103388 Virulence-associated V antigen
1 1 1 0 SCOP 140490 Nqo1C-terminal domain-like
1 1 1 1 SCOP 102735 Trigger factor ribosome-binding domain
1 1 1 1 SCOP 53743 FucI/AraA N-terminal and middle domains
1 1 1 0 SCOP 69255 gp5 N-terminal domain-like
1 1 1 1 SCOP 54680 Pyrimidine nucleoside phosphorylase C-terminal domain
1 1 1 1 SCOP 50443 FucI/AraA C-terminal domain-like
1 1 1 1 SCOP 47446 Signal peptide-binding domain
1 1 1 1 SCOP 64397 Hsp33 domain
1 1 1 0 SCOP 54991 Anticodon-binding domain of PheRS
1 1 1 1 SCOP 55271 DNA repair protein MutS, domain I
1 1 1 1 SCOP 55048 Probable ACP-binding domain of malonyl-CoA ACP transacylase
1 1 1 0 SCOP 69287 Urease metallochaperone UreE, N-terminal domain
1 1 1 1 SCOP 47928 N-terminal domain of the delta subunit of the F1F0-ATP synthase
1 1 1 1 SCOP 48108 Carbamoyl phosphate synthetase, large subunit connection domain
1 1 1 1 SCOP 82051 Obg GTP-binding protein N-terminal domain
1 1 1 1 SCOP 143724 PHP14-like
1 1 1 1 SCOP 54368 Glutamine synthetase, N-terminal domain
1 1 1 0 SCOP 47454 A DNA-binding domain in eukaryotic transcription factors
1 1 1 1 SCOP 55261 GAD domain-like
1 1 1 1 SCOP 47757 Chemotaxis receptor methyltransferase CheR, N-terminal domain
1 1 1 1 SCOP 64158 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain
1 1 1 1 SCOP 110942 HSP90 C-terminal domain
1 1 1 1 SCOP 54747 Ribosomal L11/L12e N-terminal domain
1 1 1 0 SCOP 69742 Glutamyl tRNA-reductase catalytic, N-terminal domain
1 1 1 0 SCOP 160527 V-type ATPase subunit E-like
1 1 1 1 SCOP 81886 Helical scaffold and wing domains of SecA
1 1 1 1 SCOP 54849 GroEL-intermediate domain like
1 1 1 1 SCOP 56194 Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
1 1 1 0 SCOP 52156 Initiation factor IF2/eIF5b, domain 3
1 1 1 0 SCOP 116878 TrmE connector domain
1 1 1 0 SCOP 51064 Head domain of nucleotide exchange factor GrpE
1 1 1 1 SCOP 55653 Ribosomal protein L9 C-domain
1 1 1 1 SCOP 75445 D-ribose-5-phosphate isomerase (RpiA), lid domain
1 1 1 1 SCOP 143517 TRCF domain-like
1 1 1 1 SCOP 101353 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
1 1 1 1 SCOP 56553 Insert subdomain of RNA polymerase alpha subunit
1 1 1 1 SCOP 74778 Aconitase B, N-terminal domain
1 1 1 1 SCOP 64383 Cell-division protein ZipA, C-terminal domain
1 1 1 1 SCOP 117023 DNA primase DnaG, C-terminal domain
1 1 1 1 SCOP 47644 Methionine synthase domain
1 1 1 0 SCOP 46929 DNA helicase RuvA subunit, C-terminal domain
1 1 1 0 SCOP 160467 PH0987 N-terminal domain-like
1 1 1 1 SCOP 54893 Aspartate carbamoyltransferase, Regulatory-chain, N-terminal domain
1 1 1 0 SCOP 54364 Translation initiation factor IF3, N-terminal domain
1 1 1 0 SCOP 69705 Transcription factor NusA, N-terminal domain
1 1 1 1 SCOP 47233 Bacterial GAP domain
1 1 1 1 SCOP 53150 DNA repair protein MutS, domain II
1 1 1 1 SCOP 81767 Pre-protein crosslinking domain of SecA
1 1 1 1 SCOP 140356 PPK N-terminal domain-like
1 1 1 0 SCOP 81799 Putative methyltransferase TM0872, insert domain
1 1 1 0 SCOP 82829 MesJ substrate recognition domain-like
1 1 1 0 SCOP 55052 CheY-binding domain of CheA
1 1 1 0 SCOP 46915 Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
1 1 1 0 SCOP 103661 Proline/betaine transporter ProP, C-terminal cytoplasmic domain
1 1 1 1 SCOP 143856 DeoB insert domain-like
1 1 1 1 SCOP 109736 FGAM synthase PurL, linker domain
1 1 1 1 SCOP 160996 HI0933 insert domain-like
1 1 1 1 SCOP 140570 MukF C-terminal domain-like
1 1 1 0 SCOP 57770 Methionyl-tRNA synthetase (MetRS), Zn-domain
1 1 1 1 SCOP 82317 Swiveling domain of dehydratase reactivase alpha subunit

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The following superfamilies have one or more weak hits:

SCOP superfamily Gametocyte protein Pfg27
SCOP superfamily R3H domain
SCOP superfamily BRCA2 tower domain
SCOP superfamily Subunit VIII of photosystem I reaction centre, PsaI
SCOP superfamily Family A G protein-coupled receptor-like
SCOP superfamily C-terminal domain of PLC-beta
SCOP superfamily Eea1 homodimerisation domain
SCOP superfamily Membrane penetration protein mu1
SCOP superfamily Urease metallochaperone UreE, C-terminal domain
SCOP superfamily Arp2/3 complex 21 kDa subunit ARPC3
SCOP superfamily alpha-ketoacid dehydrogenase kinase, N-terminal domain
SCOP superfamily FAT domain of focal adhesion kinase
SCOP superfamily Intermediate filament protein, coiled coil region
SCOP superfamily Telomeric repeat binding factor (TRF) dimerisation domain
SCOP superfamily BAG domain
SCOP superfamily RNA polymerase subunits
SCOP superfamily Apolipoprotein A-I
SCOP superfamily Fibrinogen coiled-coil and central regions
SCOP superfamily Tropomyosin
SCOP superfamily RING/U-box
SCOP superfamily Rubredoxin-like
SCOP superfamily Microbial and mitochondrial ADK, insert "zinc finger" domain
SCOP superfamily beta-beta-alpha zinc fingers
SCOP superfamily FnI-like domain
SCOP superfamily Trefoil
SCOP superfamily Perfringolysin
SCOP superfamily Exotoxin A, middle domain
SCOP superfamily Colicin
SCOP superfamily Homing endonucleases
SCOP superfamily Copper amine oxidase, domain N
SCOP superfamily Chromo domain-like
SCOP superfamily AFP III-like domain
SCOP superfamily Mannose-binding lectins
SCOP superfamily Outer surface protein
SCOP superfamily Amine oxidase catalytic domain
SCOP superfamily Starch-binding domain-like
SCOP superfamily Tetraspanin
SCOP superfamily Sec7 domain
SCOP superfamily Aldehyde ferredoxin oxidoreductase, C-terminal domains
SCOP superfamily PAH2 domain
SCOP superfamily t-snare proteins
SCOP superfamily EF-hand
SCOP superfamily alpha-catenin/vinculin-like
SCOP superfamily Hemerythrin-like
SCOP superfamily Apolipoprotein
SCOP superfamily Mitochondrial import receptor subunit Tom20
SCOP superfamily Prefoldin
SCOP superfamily CHY zinc finger-like
SCOP superfamily Photosystem II antenna protein-like
SCOP superfamily AF1531-like
SCOP superfamily PSTPO5379-like
SCOP superfamily SMI1/KNR4-like
SCOP superfamily YdhG-like
SCOP superfamily LanC-like
SCOP superfamily HP0062-like
SCOP superfamily YvfG-like
SCOP superfamily NOB1 zinc finger-like
SCOP superfamily YwmB-like
SCOP superfamily GK1464-like
SCOP superfamily Glu-tRNAGln amidotransferase C subunit
SCOP superfamily Indolic compounds 2,3-dioxygenase-like
SCOP superfamily PA2201 C-terminal domain-like
SCOP superfamily Phage replication organizer domain
SCOP superfamily EF2947-like
SCOP superfamily PA2201 N-terminal domain-like
SCOP superfamily Endosomal sorting complex assembly domain
SCOP superfamily YbjQ-like
SCOP superfamily MIT domain
SCOP superfamily Fzo-like conserved region
SCOP superfamily Dystroglycan, domain 2
SCOP superfamily Mitochondrial carrier
SCOP superfamily Respiratory nitrate reductase 1 gamma chain
SCOP superfamily 2-methylcitrate dehydratase PrpD
SCOP superfamily Hypothetical protein YwqG
SCOP superfamily Colicin D/E5 nuclease domain
SCOP superfamily Nonstructural protein ns2, Nep, M1-binding domain
SCOP superfamily Oxygen-evolving enhancer protein 3,
SCOP superfamily Typo IV secretion system protein TraC

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