SUPERFAMILY 1.75 HMM library and genome assignments server

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Plasmodium yoelii ssp. yoelii 1 superfamily assignments

Taxonomy
Taxonomy browser entry

Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Vinckeia); Plasmodium yoelii; Plasmodium yoelii yoelii

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Fasta format sequences
Domain assignments


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Assignment statistics

Sequences: 7861 total
2624 (33 %) with assignment
432 average length
22 % amino acid coverage
Domains: 3671 total
642 unique superfamilies
309 unique families
280 average length
5.7 average superfamily size
83 % formed by duplication
Domain combinations: 370 domain pairs
1303 unique architectures

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Superfamily assignments

Domains

Proteins

Architectures

Families

SCOP link

Superfamilies

380 310 89 8 SCOP 52540 P-loop containing nucleoside triphosphate hydrolases
140 139 6 1 SCOP 55961 Bet v1-like
100 78 23 1 SCOP 54928 RNA-binding domain, RBD
99 92 18 1 SCOP 50978 WD40 repeat-like
95 78 22 7 SCOP 48371 ARM repeat
93 91 19 2 SCOP 56112 Protein kinase-like (PK-like)
65 53 31 3 SCOP 50249 Nucleic acid-binding proteins
65 61 12 5 SCOP 53335 S-adenosyl-L-methionine-dependent methyltransferases
54 41 16 1 SCOP 48452 TPR-like
47 39 13 4 SCOP 52833 Thioredoxin-like
43 41 17 1 SCOP 57850 RING/U-box
41 23 14 3 SCOP 53067 Actin-like ATPase domain
39 37 14 1 SCOP 47473 EF-hand
32 31 5 0 SCOP 53474 alpha/beta-Hydrolases
31 30 11 3 SCOP 54001 Cysteine proteinases
29 28 19 6 SCOP 51735 NAD(P)-binding Rossmann-fold domains
29 28 18 2 SCOP 50447 Translation proteins
29 29 14 0 SCOP 46565 Chaperone J-domain
27 27 14 2 SCOP 56784 HAD-like
27 24 21 1 SCOP 52374 Nucleotidylyl transferase
27 26 18 3 SCOP 54211 Ribosomal protein S5 domain 2-like
25 25 16 2 SCOP 55681 Class II aaRS and biotin synthetases
24 21 15 1 SCOP 54236 Ubiquitin-like
22 17 12 3 SCOP 51905 FAD/NAD(P)-binding domain
21 21 4 0 SCOP 103473 MFS general substrate transporter
20 13 7 1 SCOP 47923 Ypt/Rab-GAP domain of gyp1p
19 16 12 3 SCOP 53098 Ribonuclease H-like
19 18 4 2 SCOP 56235 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
18 15 7 1 SCOP 81606 PP2C-like
18 12 10 1 SCOP 53300 vWA-like
18 11 10 0 SCOP 82185 Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
17 14 7 1 SCOP 55120 Pseudouridine synthase
17 17 7 2 SCOP 56300 Metallo-dependent phosphatases
17 16 8 0 SCOP 46785 "Winged helix" DNA-binding domain
17 17 7 2 SCOP 64356 SNARE-like
17 6 6 1 SCOP 63411 LuxS/MPP-like metallohydrolase
17 9 7 1 SCOP 54980 EF-G C-terminal domain-like
16 12 5 1 SCOP 50985 RCC1/BLIP-II
16 16 6 1 SCOP 54495 UBC-like
16 16 5 0 SCOP 52058 L domain-like
16 9 8 0 SCOP 54791 Eukaryotic type KH-domain (KH-domain type I)
15 14 8 1 SCOP 48403 Ankyrin repeat
15 15 6 1 SCOP 50630 Acid proteases
15 15 10 2 SCOP 50729 PH domain-like
15 12 9 0 SCOP 117281 Kelch motif
14 13 10 3 SCOP 56672 DNA/RNA polymerases
14 12 6 2 SCOP 56219 DNase I-like
14 7 4 0 SCOP 49562 C2 domain (Calcium/lipid-binding domain, CaLB)
13 12 5 2 SCOP 56281 Metallo-hydrolase/oxidoreductase
13 11 6 0 SCOP 46689 Homeodomain-like
13 13 4 0 SCOP 49764 HSP20-like chaperones
13 13 4 1 SCOP 50182 Sm-like ribonucleoproteins
13 9 6 0 SCOP 49785 Galactose-binding domain-like
13 12 5 1 SCOP 48592 GroEL equatorial domain-like
13 12 9 1 SCOP 81665 Calcium ATPase, transmembrane domain M
12 12 6 1 SCOP 50104 Translation proteins SH3-like domain
12 8 6 4 SCOP 52518 Thiamin diphosphate-binding fold (THDP-binding)
12 11 5 1 SCOP 103506 Mitochondrial carrier
12 12 4 1 SCOP 50891 Cyclophilin-like
12 12 9 2 SCOP 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
12 4 4 0 SCOP 51206 cAMP-binding domain-like
12 9 5 0 SCOP 57667 beta-beta-alpha zinc fingers
12 12 5 2 SCOP 52029 GroEL apical domain-like
12 8 4 0 SCOP 90229 CCCH zinc finger
12 12 9 0 SCOP 81653 Calcium ATPase, transduction domain A
11 10 6 0 SCOP 58038 SNARE fusion complex
11 10 7 2 SCOP 55729 Acyl-CoA N-acyltransferases (Nat)
11 10 4 0 SCOP 52047 RNI-like
11 11 4 0 SCOP 144091 Rhomboid-like
11 11 10 1 SCOP 47323 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
11 8 7 0 SCOP 57903 FYVE/PHD zinc finger
11 9 6 0 SCOP 47954 Cyclin-like
10 10 8 2 SCOP 56059 Glutathione synthetase ATP-binding domain-like
10 10 5 4 SCOP 53383 PLP-dependent transferases
10 9 6 1 SCOP 52402 Adenine nucleotide alpha hydrolases-like
10 8 5 2 SCOP 64484 beta and beta-prime subunits of DNA dependent RNA-polymerase
10 10 7 0 SCOP 82199 SET domain
10 5 4 0 SCOP 49493 HSP40/DnaJ peptide-binding domain
10 7 5 0 SCOP 82895 TSP-1 type 1 repeat
9 9 5 0 SCOP 51161 Trimeric LpxA-like enzymes
9 9 3 1 SCOP 47113 Histone-fold
9 8 6 0 SCOP 69572 Activating enzymes of the ubiquitin-like proteins
9 9 6 0 SCOP 141571 Pentapeptide repeat-like
9 7 5 0 SCOP 90123 ABC transporter transmembrane region
9 9 2 0 SCOP 54849 GroEL-intermediate domain like
8 7 5 1 SCOP 53448 Nucleotide-diphospho-sugar transferases
8 7 5 1 SCOP 52317 Class I glutamine amidotransferase-like
8 8 5 0 SCOP 75217 alpha/beta knot
8 8 5 0 SCOP 49899 Concanavalin A-like lectins/glucanases
8 6 5 0 SCOP 55073 Nucleotide cyclase
8 7 7 0 SCOP 46934 UBA-like
8 5 2 0 SCOP 57196 EGF/Laminin
8 7 7 0 SCOP 51045 WW domain
7 6 6 1 SCOP 55920 Creatinase/aminopeptidase
7 6 5 2 SCOP 52096 ClpP/crotonase
7 7 5 1 SCOP 56801 Acetyl-CoA synthetase-like
7 7 5 1 SCOP 55315 L30e-like
7 5 5 0 SCOP 81296 E set domains
7 7 5 1 SCOP 52954 Class II aaRS ABD-related
7 6 6 0 SCOP 57783 Zinc beta-ribbon
7 6 6 1 SCOP 51230 Single hybrid motif
7 3 3 0 SCOP 81901 HCP-like
7 7 1 1 SCOP 50465 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
7 7 4 1 SCOP 47370 Bromodomain
7 5 4 1 SCOP 56204 Hect, E3 ligase catalytic domain
7 4 3 0 SCOP 69848 LCCL domain
6 6 4 1 SCOP 53137 Translational machinery components
6 5 3 0 SCOP 69593 Glycerol-3-phosphate (1)-acyltransferase
6 5 4 0 SCOP 100950 NagB/RpiA/CoA transferase-like
6 6 4 0 SCOP 102114 Radical SAM enzymes
6 6 5 0 SCOP 53254 Phosphoglycerate mutase-like
6 6 5 0 SCOP 52949 Macro domain-like
6 6 4 1 SCOP 109604 HD-domain/PDEase-like
6 6 3 0 SCOP 55257 RBP11-like subunits of RNA polymerase
6 6 4 2 SCOP 52768 Arginase/deacetylase
6 6 5 1 SCOP 81301 Nucleotidyltransferase
6 5 4 0 SCOP 49879 SMAD/FHA domain
6 6 6 0 SCOP 88697 PUA domain-like
6 6 4 0 SCOP 103481 Multidrug resistance efflux transporter EmrE
6 6 3 1 SCOP 52490 Tubulin nucleotide-binding domain-like
6 6 6 1 SCOP 47616 GST C-terminal domain-like
6 6 4 0 SCOP 47661 t-snare proteins
6 6 3 1 SCOP 55307 Tubulin C-terminal domain-like
6 6 4 0 SCOP 81660 Metal cation-transporting ATPase, ATP-binding domain N
6 2 2 0 SCOP 53738 Phosphoglucomutase, first 3 domains
6 4 3 0 SCOP 57184 Growth factor receptor domain
5 4 3 2 SCOP 53271 PRTase-like
5 5 2 0 SCOP 57829 Zn-binding ribosomal proteins
5 5 3 0 SCOP 56808 Ribosomal protein L1
5 5 3 0 SCOP 57716 Glucocorticoid receptor-like (DNA-binding domain)
5 3 3 1 SCOP 53784 Phosphofructokinase
5 5 3 0 SCOP 55174 Alpha-L RNA-binding motif
5 5 3 1 SCOP 55486 Metalloproteases ("zincins"), catalytic domain
5 5 5 1 SCOP 56104 SAICAR synthase-like
5 5 1 0 SCOP 144122 Tim10-like
5 5 3 1 SCOP 52799 (Phosphotyrosine protein) phosphatases II
5 4 3 1 SCOP 56815 Sec1/munc18-like (SM) proteins
5 5 4 1 SCOP 88723 PIN domain-like
5 4 4 0 SCOP 58113 Apolipoprotein A-I
5 5 4 3 SCOP 52467 DHS-like NAD/FAD-binding domain
5 1 1 0 SCOP 50199 Staphylococcal nuclease
5 5 3 1 SCOP 48179 6-phosphogluconate dehydrogenase C-terminal domain-like
5 5 4 1 SCOP 55424 FAD/NAD-linked reductases, dimerisation (C-terminal) domain
5 3 2 1 SCOP 55979 DNA clamp
5 5 3 0 SCOP 48019 post-AAA+ oligomerization domain-like
5 3 3 0 SCOP 55945 TATA-box binding protein-like
5 4 4 0 SCOP 54160 Chromo domain-like
5 3 3 0 SCOP 158702 Sec63 N-terminal domain-like
5 5 5 0 SCOP 100934 Heat shock protein 70kD (HSP70), C-terminal subdomain
5 5 5 0 SCOP 49348 Clathrin adaptor appendage domain
5 5 5 0 SCOP 52087 CRAL/TRIO domain
5 5 3 1 SCOP 49447 Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor
5 5 3 0 SCOP 110942 HSP90 C-terminal domain
5 5 3 0 SCOP 143503 PUG domain-like
5 5 4 1 SCOP 54585 Cdc48 domain 2-like
4 4 2 2 SCOP 51556 Metallo-dependent hydrolases
4 4 3 3 SCOP 51366 Ribulose-phoshate binding barrel
4 4 3 1 SCOP 54189 Ribosomal proteins S24e, L23 and L15e
4 4 2 0 SCOP 52080 Ribosomal proteins L15p and L18e
4 4 3 1 SCOP 47240 Ferritin-like
4 4 4 0 SCOP 110324 Ribosomal L27 protein-like
4 4 2 1 SCOP 75620 Release factor
4 3 3 0 SCOP 52821 Rhodanese/Cell cycle control phosphatase
4 3 3 1 SCOP 50715 Ribosomal protein L25-like
4 4 3 1 SCOP 51395 FMN-linked oxidoreductases
4 4 1 0 SCOP 81452 Cytochrome c oxidase subunit III-like
4 4 4 1 SCOP 53187 Zn-dependent exopeptidases
4 3 2 0 SCOP 47095 HMG-box
4 4 3 0 SCOP 46579 Prefoldin
4 4 4 2 SCOP 48239 Terpenoid cyclases/Protein prenyltransferases
4 4 3 1 SCOP 51445 (Trans)glycosidases
4 4 2 2 SCOP 52972 ITPase-like
4 4 3 0 SCOP 55781 GAF domain-like
4 4 2 1 SCOP 111126 Ligand-binding domain in the NO signalling and Golgi transport
4 4 3 1 SCOP 52151 FabD/lysophospholipase-like
4 3 3 0 SCOP 46955 Putative DNA-binding domain
4 4 3 1 SCOP 50998 Quinoprotein alcohol dehydrogenase-like
4 4 4 1 SCOP 103025 Folate-binding domain
4 4 4 0 SCOP 69322 Tricorn protease domain 2
4 2 1 1 SCOP 53901 Thiolase-like
4 4 4 0 SCOP 82171 DPP6 N-terminal domain-like
4 4 2 1 SCOP 89124 Nop domain
4 3 3 1 SCOP 55186 ThrRS/AlaRS common domain
4 4 4 0 SCOP 50156 PDZ domain-like
4 4 4 1 SCOP 53223 Aminoacid dehydrogenase-like, N-terminal domain
4 4 3 1 SCOP 52922 TK C-terminal domain-like
4 4 4 0 SCOP 81995 beta-sandwich domain of Sec23/24
4 3 3 1 SCOP 52210 Succinyl-CoA synthetase domains
4 4 4 3 SCOP 55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
4 4 3 1 SCOP 81631 PAP/OAS1 substrate-binding domain
4 4 3 0 SCOP 144232 HIT/MYND zinc finger-like
4 4 3 1 SCOP 50677 ValRS/IleRS/LeuRS editing domain
4 4 3 1 SCOP 47807 5' to 3' exonuclease, C-terminal subdomain
4 4 2 1 SCOP 48445 14-3-3 protein
4 4 3 1 SCOP 101447 Formin homology 2 domain (FH2 domain)
4 4 3 0 SCOP 49599 TRAF domain-like
4 3 3 0 SCOP 109905 Surp module (SWAP domain)
4 4 2 0 SCOP 55277 GYF domain
4 4 4 0 SCOP 52156 Initiation factor IF2/eIF5b, domain 3
4 4 2 0 SCOP 56553 Insert subdomain of RNA polymerase alpha subunit
3 3 3 2 SCOP 51569 Aldolase
3 3 2 1 SCOP 53613 Ribokinase-like
3 3 2 0 SCOP 111331 NAD kinase/diacylglycerol kinase-like
3 2 2 0 SCOP 54843 Ribosomal protein L22
3 3 3 1 SCOP 54686 Ribosomal protein L16p/L10e
3 3 2 1 SCOP 50193 Ribosomal protein L14
3 3 3 0 SCOP 52218 Flavoproteins
3 3 3 1 SCOP 82649 SufE/NifU
3 3 3 0 SCOP 52980 Restriction endonuclease-like
3 3 3 0 SCOP 160369 Ribosomal protein L10-like
3 3 2 0 SCOP 50129 GroES-like
3 3 1 0 SCOP 81333 F1F0 ATP synthase subunit C
3 3 2 0 SCOP 47060 S15/NS1 RNA-binding domain
3 3 3 0 SCOP 48150 DNA-glycosylase
3 3 1 0 SCOP 89360 HesB-like domain
3 3 3 1 SCOP 51713 tRNA-guanine transglycosylase
3 3 3 1 SCOP 54292 2Fe-2S ferredoxin-like
3 3 3 2 SCOP 51621 Phosphoenolpyruvate/pyruvate domain
3 3 2 0 SCOP 55811 Nudix
3 3 1 0 SCOP 53756 UDP-Glycosyltransferase/glycogen phosphorylase
3 3 2 0 SCOP 64005 Undecaprenyl diphosphate synthase
3 3 2 0 SCOP 55205 EPT/RTPC-like
3 3 3 0 SCOP 56988 Anthrax protective antigen
3 3 2 1 SCOP 51430 NAD(P)-linked oxidoreductase
3 3 2 0 SCOP 55753 Actin depolymerizing proteins
3 3 1 1 SCOP 54648 DLC
3 3 2 2 SCOP 46626 Cytochrome c
3 3 2 0 SCOP 51197 Clavaminate synthase-like
3 3 2 1 SCOP 54919 Nucleoside diphosphate kinase, NDK
3 3 3 0 SCOP 55856 Cytochrome b5-like heme/steroid binding domain
3 3 3 1 SCOP 47576 Calponin-homology domain, CH-domain
3 3 3 0 SCOP 54695 POZ domain
3 2 2 1 SCOP 52283 Formate/glycerate dehydrogenase catalytic domain-like
3 3 2 1 SCOP 55931 Glutamine synthetase/guanido kinase
3 3 1 1 SCOP 81342 Transmembrane di-heme cytochromes
3 3 1 0 SCOP 81648 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
3 3 3 0 SCOP 54631 CBS-domain pair
3 3 2 0 SCOP 81324 Voltage-gated potassium channels
3 2 2 0 SCOP 54593 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
3 3 3 0 SCOP 117916 Fe-S cluster assembly (FSCA) domain-like
3 3 2 0 SCOP 50692 ADC-like
3 2 2 0 SCOP 56024 Phospholipase D/nuclease
3 3 3 2 SCOP 56091 DNA ligase/mRNA capping enzyme, catalytic domain
3 3 3 0 SCOP 47592 SWIB/MDM2 domain
3 3 1 0 SCOP 82704 AlbA-like
3 3 3 1 SCOP 52777 CoA-dependent acyltransferases
3 3 3 0 SCOP 52343 Ferredoxin reductase-like, C-terminal NADP-linked domain
3 2 2 0 SCOP 82866 Multidrug efflux transporter AcrB transmembrane domain
3 3 2 0 SCOP 50370 Ricin B-like lectins
3 3 3 0 SCOP 81923 Double Clp-N motif
3 3 3 1 SCOP 56719 Type II DNA topoisomerase
3 3 3 0 SCOP 50965 Galactose oxidase, central domain
3 1 1 1 SCOP 55973 S-adenosylmethionine synthetase
3 3 3 0 SCOP 51971 Nucleotide-binding domain
3 3 3 1 SCOP 52440 PreATP-grasp domain
3 3 3 0 SCOP 48334 DNA repair protein MutS, domain III
3 3 2 1 SCOP 140990 FtsH protease domain-like
3 3 1 0 SCOP 57863 ArfGap/RecO-like zinc finger
3 3 3 0 SCOP 63380 Riboflavin synthase domain-like
3 3 3 1 SCOP 100920 Heat shock protein 70kD (HSP70), peptide-binding domain
3 3 2 1 SCOP 56327 LDH C-terminal domain-like
3 3 3 0 SCOP 52113 BRCT domain
3 3 1 0 SCOP 117892 Band 7/SPFH domain
3 3 2 0 SCOP 50615 N-terminal domain of alpha and beta subunits of F1 ATP synthase
3 3 2 1 SCOP 81271 TGS-like
3 3 2 0 SCOP 57845 B-box zinc-binding domain
3 3 1 0 SCOP 158573 GINS helical bundle-like
3 3 3 0 SCOP 47769 SAM/Pointed domain
3 3 2 0 SCOP 48464 ENTH/VHS domain
3 3 2 1 SCOP 82051 Obg GTP-binding protein N-terminal domain
3 3 3 1 SCOP 82754 C-terminal, gelsolin-like domain of Sec23/24
3 3 3 0 SCOP 75553 Smc hinge domain
3 3 2 0 SCOP 55666 Ribonuclease PH domain 2-like
3 3 2 1 SCOP 47917 C-terminal domain of alpha and beta subunits of F1 ATP synthase
3 2 2 0 SCOP 81698 FF domain
3 3 3 1 SCOP 81811 Helical domain of Sec23/24
3 3 3 0 SCOP 82919 Zn-finger domain of Sec23/24
2 2 2 1 SCOP 81338 Aquaporin-like
2 2 1 1 SCOP 53167 Purine and uridine phosphorylases
2 2 2 0 SCOP 53927 Cytidine deaminase-like
2 2 2 2 SCOP 53697 SIS domain
2 2 1 1 SCOP 54197 HIT-like
2 2 2 0 SCOP 89919 Ribosome-binding factor A, RbfA
2 2 2 1 SCOP 52166 Ribosomal protein L4
2 2 1 1 SCOP 56047 Ribosomal protein S8
2 2 2 0 SCOP 64263 Prokaryotic ribosomal protein L17
2 2 1 0 SCOP 141091 L21p-like
2 2 2 1 SCOP 51658 Xylose isomerase-like
2 2 2 1 SCOP 51695 PLC-like phosphodiesterases
2 2 2 1 SCOP 53659 Isocitrate/Isopropylmalate dehydrogenase-like
2 2 2 1 SCOP 51351 Triosephosphate isomerase (TIM)
2 2 1 0 SCOP 55194 Ribosome recycling factor, RRF
2 2 1 1 SCOP 48557 L-aspartase-like
2 2 2 0 SCOP 48576 Terpenoid synthases
2 2 2 0 SCOP 55129 Ribosomal protein L30p/L7e
2 2 2 0 SCOP 54995 Ribosomal protein S6
2 2 2 0 SCOP 144217 CSL zinc finger
2 2 1 1 SCOP 48256 Citrate synthase
2 2 1 1 SCOP 141678 MAL13P1.257-like
2 1 1 0 SCOP 110296 Oligoxyloglucan reducing end-specific cellobiohydrolase
2 2 2 1 SCOP 54534 FKBP-like
2 2 2 0 SCOP 54427 NTF2-like
2 2 2 1 SCOP 57798 Casein kinase II beta subunit
2 2 2 1 SCOP 47027 Acyl-CoA binding protein
2 1 1 0 SCOP 144000 Oxysterol-binding protein-like
2 2 2 0 SCOP 56019 The spindle assembly checkpoint protein mad2
2 2 2 0 SCOP 51306 LexA/Signal peptidase
2 2 2 0 SCOP 47819 HRDC-like
2 2 2 0 SCOP 48439 Protein prenylyltransferase
2 2 2 0 SCOP 51126 Pectin lyase-like
2 2 1 0 SCOP 49777 PEBP-like
2 2 1 1 SCOP 64153 YjeF N-terminal domain-like
2 2 2 1 SCOP 55159 eIF1-like
2 2 2 1 SCOP 143113 NAP-like
2 2 2 0 SCOP 103111 Activator of Hsp90 ATPase, Aha1
2 2 2 0 SCOP 55418 eIF4e-like
2 2 1 1 SCOP 81442 Cytochrome c oxidase subunit I-like
2 2 2 0 SCOP 101960 Stabilizer of iron transporter SufD
2 2 2 1 SCOP 56349 DNA breaking-rejoining enzymes
2 2 2 1 SCOP 50022 ISP domain
2 2 2 0 SCOP 54736 ClpS-like
2 2 2 0 SCOP 50800 PK beta-barrel domain-like
2 2 1 1 SCOP 103365 Hypothetical protein PH1602
2 2 2 0 SCOP 109910 YgfY-like
2 2 2 0 SCOP 57802 Rubredoxin-like
2 1 1 0 SCOP 117457 FumA C-terminal domain-like
2 2 2 0 SCOP 161070 SNF-like
2 2 1 1 SCOP 103196 Roadblock/LC7 domain
2 2 1 1 SCOP 51604 Enolase C-terminal domain-like
2 2 2 0 SCOP 47781 RuvA domain 2-like
2 2 2 0 SCOP 111321 AF1104-like
2 2 2 1 SCOP 46548 alpha-helical ferredoxin
2 2 2 0 SCOP 102462 Peptidyl-tRNA hydrolase II
2 2 2 1 SCOP 52743 Subtilisin-like
2 2 2 0 SCOP 57938 DnaJ/Hsp40 cysteine-rich domain
2 2 2 0 SCOP 46906 Ribosomal protein L11, C-terminal domain
2 2 2 0 SCOP 63825 YWTD domain
2 2 2 0 SCOP 48537 Phospholipase C/P1 nuclease
2 2 2 0 SCOP 58104 Methyl-accepting chemotaxis protein (MCP) signaling domain
2 2 2 0 SCOP 52935 PK C-terminal domain-like
2 1 1 0 SCOP 118116 DNA mismatch repair protein MutL
2 2 2 0 SCOP 56037 PheT/TilS domain
2 2 2 1 SCOP 54719 Fe,Mn superoxide dismutase (SOD), C-terminal domain
2 2 1 1 SCOP 54826 Enolase N-terminal domain-like
2 2 2 0 SCOP 47364 Domain of the SRP/SRP receptor G-proteins
2 2 2 0 SCOP 49354 PapD-like
2 2 2 0 SCOP 75689 Zinc-binding domain of translation initiation factor 2 beta
2 2 2 0 SCOP 100966 Translation initiation factor 2 beta, aIF2beta, N-terminal domain
2 2 2 0 SCOP 54768 dsRNA-binding domain-like
2 2 1 0 SCOP 56496 Fibrinogen C-terminal domain-like
2 2 1 0 SCOP 55637 Cell cycle regulatory proteins
2 2 2 0 SCOP 47794 Rad51 N-terminal domain-like
2 2 2 0 SCOP 54373 FAD-linked reductases, C-terminal domain
2 1 1 0 SCOP 56053 Ribosomal protein L6
2 2 2 0 SCOP 55957 Phosphoglucomutase, C-terminal domain
2 2 2 0 SCOP 63748 Tudor/PWWP/MBT
2 2 2 0 SCOP 74924 Cap-Gly domain
2 2 2 0 SCOP 55271 DNA repair protein MutS, domain I
2 2 1 0 SCOP 74788 Cullin repeat-like
2 2 2 0 SCOP 48108 Carbamoyl phosphate synthetase, large subunit connection domain
2 2 2 0 SCOP 69000 FAD-dependent thiol oxidase
2 2 2 0 SCOP 47676 Conserved domain common to transcription factors TFIIS, elongin A, CRSP70
2 2 2 0 SCOP 109993 VPS9 domain
2 2 1 0 SCOP 75001 Dipeptidyl peptidase I (cathepsin C), exclusion domain
2 2 2 0 SCOP 57535 Complement control module/SCR domain
2 2 1 0 SCOP 88798 N-terminal, heterodimerisation domain of RBP7 (RpoE)
2 2 1 0 SCOP 75632 Cullin homology domain
2 1 1 0 SCOP 56487 SRCR-like
2 1 1 0 SCOP 54713 Elongation factor Ts (EF-Ts), dimerisation domain
2 2 2 1 SCOP 54747 Ribosomal L11/L12e N-terminal domain
2 2 2 0 SCOP 53036 Eukaryotic RPB5 N-terminal domain
2 2 2 0 SCOP 46942 Elongation factor TFIIS domain 2
2 2 2 0 SCOP 51156 Insect cysteine-rich antifreeze protein
2 1 1 0 SCOP 49758 Calpain large subunit, middle domain (domain III)
2 2 2 0 SCOP 140383 BSD domain-like
2 2 2 0 SCOP 101790 Aminomethyltransferase beta-barrel domain
1 1 1 0 SCOP 56731 DNA primase core
1 1 1 1 SCOP 53790 Tetrapyrrole methylase
1 1 1 1 SCOP 47973 Ribosomal protein S7
1 1 1 0 SCOP 46911 Ribosomal protein S18
1 1 1 1 SCOP 52141 Uracil-DNA glycosylase-like
1 1 1 1 SCOP 75304 Amidase signature (AS) enzymes
1 1 1 1 SCOP 56420 Peptide deformylase
1 1 1 0 SCOP 54999 Ribosomal protein S10
1 1 1 0 SCOP 54570 Ribosomal protein S19
1 1 1 1 SCOP 55282 RL5-like
1 1 1 1 SCOP 103491 Preprotein translocase SecY subunit
1 1 1 0 SCOP 46946 S13-like H2TH domain
1 1 1 0 SCOP 143034 L35p-like
1 1 1 0 SCOP 74731 Ribosomal protein L20
1 1 1 0 SCOP 103657 BAR/IMD domain-like
1 1 1 0 SCOP 56214 4'-phosphopantetheinyl transferase
1 1 1 1 SCOP 55831 Thymidylate synthase/dCMP hydroxymethylase
1 1 1 1 SCOP 53597 Dihydrofolate reductase-like
1 1 1 0 SCOP 143800 L28p-like
1 1 1 0 SCOP 47336 ACP-like
1 1 1 1 SCOP 53748 Phosphoglycerate kinase
1 1 1 1 SCOP 50324 Inorganic pyrophosphatase
1 1 1 0 SCOP 109998 Triger factor/SurA peptide-binding domain-like
1 1 1 1 SCOP 52943 ATP synthase (F1-ATPase), gamma subunit
1 1 1 1 SCOP 53850 Periplasmic binding protein-like II
1 1 1 0 SCOP 52161 Ribosomal protein L13
1 1 1 0 SCOP 54565 Ribosomal protein S16
1 1 1 1 SCOP 51316 Mss4-like
1 1 1 1 SCOP 69765 IpsF-like
1 1 1 0 SCOP 55821 YrdC/RibB
1 1 1 1 SCOP 103263 Chorismate synthase, AroC
1 1 1 1 SCOP 51283 dUTPase-like
1 1 1 0 SCOP 54862 4Fe-4S ferredoxins
1 1 1 1 SCOP 51412 Inosine monophosphate dehydrogenase (IMPDH)
1 1 1 0 SCOP 56276 S-adenosylmethionine decarboxylase
1 1 1 1 SCOP 52313 Ribosomal protein S2
1 1 1 0 SCOP 54285 MoaD/ThiS
1 1 1 1 SCOP 54637 Thioesterase/thiol ester dehydrase-isomerase
1 1 1 0 SCOP 101908 Putative isomerase YbhE
1 1 1 0 SCOP 56935 Porins
1 1 1 0 SCOP 82657 BolA-like
1 1 1 0 SCOP 46561 Ribosomal protein L29 (L29p)
1 1 1 1 SCOP 51419 PLP-binding barrel
1 1 1 0 SCOP 48140 Ribosomal protein L19 (L19e)
1 1 1 0 SCOP 52042 Ribosomal protein L32e
1 1 1 0 SCOP 50475 FMN-binding split barrel
1 1 1 0 SCOP 63829 Calcium-dependent phosphotriesterase
1 1 1 0 SCOP 55469 FMN-dependent nitroreductase-like
1 1 1 0 SCOP 54575 Ribosomal protein L31e
1 1 1 0 SCOP 54762 Signal recognition particle alu RNA binding heterodimer, SRP9/14
1 1 1 0 SCOP 69500 DTD-like
1 1 1 1 SCOP 102886 Coproporphyrinogen III oxidase
1 1 1 1 SCOP 51726 UROD/MetE-like
1 1 1 0 SCOP 103456 Preprotein translocase SecE subunit
1 1 1 0 SCOP 140718 Mediator hinge subcomplex-like
1 1 1 0 SCOP 53328 Formyltransferase
1 1 1 0 SCOP 81524 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 0 SCOP 53649 Alkaline phosphatase-like
1 1 1 1 SCOP 56322 ADC synthase
1 1 1 0 SCOP 52499 Isochorismatase-like hydrolases
1 1 1 0 SCOP 159468 AtpF-like
1 1 1 0 SCOP 63393 RNA polymerase subunits
1 1 1 0 SCOP 55144 LigT-like
1 1 1 0 SCOP 144210 Nop10-like SnoRNP
1 1 1 0 SCOP 89895 FYSH domain
1 1 1 0 SCOP 56752 D-aminoacid aminotransferase-like PLP-dependent enzymes
1 1 1 0 SCOP 90096 Subunits of heterodimeric actin filament capping protein Capz
1 1 1 0 SCOP 57997 Tropomyosin
1 1 1 0 SCOP 51182 RmlC-like cupins
1 1 1 0 SCOP 81508 Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 1 SCOP 118203 Vacuolar ATP synthase subunit C
1 1 1 0 SCOP 161219 CHY zinc finger-like
1 1 1 0 SCOP 47072 Cysteine alpha-hairpin motif
1 1 1 0 SCOP 82282 Homocysteine S-methyltransferase
1 1 1 0 SCOP 47694 Cytochrome c oxidase subunit h
1 1 1 0 SCOP 88713 Glycoside hydrolase/deacetylase
1 1 1 0 SCOP 103486 V-type ATP synthase subunit C
1 1 1 0 SCOP 53032 tRNA-intron endonuclease catalytic domain-like
1 1 1 0 SCOP 56399 ADP-ribosylation
1 1 1 0 SCOP 55770 Profilin (actin-binding protein)
1 1 1 0 SCOP 46924 RNA polymerase subunit RPB10
1 1 1 0 SCOP 46988 Tubulin chaperone cofactor A
1 1 1 0 SCOP 143447 AMMECR1-like
1 1 1 0 SCOP 64268 PX domain
1 1 1 1 SCOP 55909 Pentein
1 1 1 0 SCOP 63562 RPB6/omega subunit-like
1 1 1 0 SCOP 53800 Chelatase
1 1 1 1 SCOP 55620 Tetrahydrobiopterin biosynthesis enzymes-like
1 1 1 0 SCOP 101546 ASF1-like
1 1 1 0 SCOP 52172 CheY-like
1 1 1 0 SCOP 51069 Carbonic anhydrase
1 1 1 0 SCOP 102405 MCP/YpsA-like
1 1 1 0 SCOP 143243 Nqo5-like
1 1 1 1 SCOP 51717 Dihydropteroate synthetase-like
1 1 1 0 SCOP 56601 beta-lactamase/transpeptidase-like
1 1 1 1 SCOP 53795 PEP carboxykinase-like
1 1 1 1 SCOP 51998 PFL-like glycyl radical enzymes
1 1 1 0 SCOP 102712 JAB1/MPN domain
1 1 1 0 SCOP 55724 Mog1p/PsbP-like
1 1 1 0 SCOP 50494 Trypsin-like serine proteases
1 1 1 1 SCOP 52016 LeuD/IlvD-like
1 1 1 0 SCOP 55331 Tautomerase/MIF
1 1 1 0 SCOP 47413 lambda repressor-like DNA-binding domains
1 1 1 0 SCOP 75712 Rad50 coiled-coil Zn hook
1 1 1 0 SCOP 53807 "Helical backbone" metal receptor
1 1 1 0 SCOP 55083 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
1 1 1 0 SCOP 49503 Cupredoxins
1 1 1 0 SCOP 101744 Rof/RNase P subunit-like
1 1 1 0 SCOP 54447 ssDNA-binding transcriptional regulator domain
1 1 1 0 SCOP 89550 PHP domain-like
1 1 1 0 SCOP 55154 CYTH-like phosphatases
1 1 1 0 SCOP 52507 Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
1 1 1 0 SCOP 161111 Cation efflux protein transmembrane domain-like
1 1 1 0 SCOP 111069 Hypothetical protein yfbM
1 1 1 1 SCOP 53732 Aconitase iron-sulfur domain
1 1 1 0 SCOP 54518 Tubby C-terminal domain-like
1 1 1 0 SCOP 55200 Translation initiation factor IF3, C-terminal domain
1 1 1 0 SCOP 158997 Trm112p-like
1 1 1 0 SCOP 143456 VC0467-like
1 1 1 0 SCOP 48173 Cryptochrome/photolyase FAD-binding domain
1 1 1 0 SCOP 52425 Cryptochrome/photolyase, N-terminal domain
1 1 1 0 SCOP 50969 YVTN repeat-like/Quinoprotein amine dehydrogenase
1 1 1 0 SCOP 102400 DNA polymerase III chi subunit
1 1 1 0 SCOP 55826 YbaK/ProRS associated domain
1 1 1 0 SCOP 102588 LmbE-like
1 1 1 0 SCOP 88659 Sigma3 and sigma4 domains of RNA polymerase sigma factors
1 1 1 0 SCOP 160909 ATP12-like
1 1 1 0 SCOP 56747 Prim-pol domain
1 1 1 0 SCOP 52335 Methylglyoxal synthase-like
1 1 1 0 SCOP 55785 PYP-like sensor domain (PAS domain)
1 1 1 0 SCOP 50814 Lipocalins
1 1 1 0 SCOP 50486 FMT C-terminal domain-like
1 1 1 0 SCOP 140319 IscX-like
1 1 1 0 SCOP 69754 Ribosome binding protein Y (YfiA homologue)
1 1 1 0 SCOP 56726 DNA topoisomerase IV, alpha subunit
1 1 1 0 SCOP 46950 Double-stranded DNA-binding domain
1 1 1 0 SCOP 54984 eEF-1beta-like
1 1 1 0 SCOP 69819 MTH1598-like
1 1 1 0 SCOP 55287 RPB5-like RNA polymerase subunit
1 1 1 0 SCOP 143437 THUMP domain-like
1 1 1 0 SCOP 116820 Rps17e-like
1 1 1 0 SCOP 160374 RplX-like
1 1 1 0 SCOP 69695 SRP19
1 1 1 0 SCOP 53092 Creatinase/prolidase N-terminal domain
1 1 1 0 SCOP 46589 tRNA-binding arm
1 1 1 0 SCOP 53244 MurD-like peptide ligases, peptide-binding domain
1 1 1 1 SCOP 69336 Alpha subunit of glutamate synthase, C-terminal domain
1 1 1 0 SCOP 56712 Prokaryotic type I DNA topoisomerase
1 1 1 1 SCOP 51690 Nicotinate/Quinolinate PRTase C-terminal domain-like
1 1 1 1 SCOP 51246 Rudiment single hybrid motif
1 1 1 0 SCOP 69318 Integrin alpha N-terminal domain
1 1 1 0 SCOP 82114 Riboflavin kinase-like
1 1 1 0 SCOP 141255 YccV-like
1 1 1 0 SCOP 102645 CoaB-like
1 1 1 0 SCOP 69989 C-terminal domain of PLC-beta
1 1 1 0 SCOP 56014 Nitrite and sulphite reductase 4Fe-4S domain-like
1 1 1 0 SCOP 49384 Carbohydrate-binding domain
1 1 1 0 SCOP 51344 Epsilon subunit of F1F0-ATP synthase N-terminal domain
1 1 1 0 SCOP 55658 L9 N-domain-like
1 1 1 0 SCOP 144206 NOB1 zinc finger-like
1 1 1 0 SCOP 158745 LanC-like
1 1 1 0 SCOP 141066 ICP-like
1 1 1 1 SCOP 68923 PEP carboxykinase N-terminal domain
1 1 1 0 SCOP 69055 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
1 1 1 0 SCOP 58014 Coiled-coil domain of nucleotide exchange factor GrpE
1 1 1 0 SCOP 63999 Thiamin pyrophosphokinase, catalytic domain
1 1 1 0 SCOP 81464 Cytochrome c oxidase subunit II-like, transmembrane region
1 1 1 1 SCOP 53671 Aspartate/ornithine carbamoyltransferase
1 1 1 0 SCOP 50621 Alanine racemase C-terminal domain-like
1 1 1 0 SCOP 48163 An anticodon-binding domain of class I aminoacyl-tRNA synthetases
1 1 1 1 SCOP 110111 Ctag/Cox11
1 1 1 0 SCOP 110019 ERO1-like
1 1 1 1 SCOP 52021 Carbamoyl phosphate synthetase, small subunit N-terminal domain
1 1 1 0 SCOP 51120 beta-Roll
1 1 1 1 SCOP 53623 MurD-like peptide ligases, catalytic domain
1 1 1 0 SCOP 55060 GHMP Kinase, C-terminal domain
1 1 1 0 SCOP 81891 Poly A polymerase C-terminal region-like
1 1 1 0 SCOP 68906 SAP domain
1 1 1 0 SCOP 56042 PurM C-terminal domain-like
1 1 1 0 SCOP 53920 Fe-only hydrogenase
1 1 1 1 SCOP 54810 GMP synthetase C-terminal dimerisation domain
1 1 1 1 SCOP 56425 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
1 1 1 0 SCOP 101904 GyrA/ParC C-terminal domain-like
1 1 1 1 SCOP 46977 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
1 1 1 0 SCOP 63737 Leukotriene A4 hydrolase N-terminal domain
1 1 1 0 SCOP 90209 Ran binding protein zinc finger-like
1 1 1 0 SCOP 55326 PurM N-terminal domain-like
1 1 1 0 SCOP 144083 Magnesium transport protein CorA, transmembrane region
1 1 1 0 SCOP 160240 Cation efflux protein cytoplasmic domain-like
1 1 1 0 SCOP 46938 CRAL/TRIO N-terminal domain
1 1 1 0 SCOP 54782 Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
1 1 1 1 SCOP 81837 BEACH domain
1 1 1 0 SCOP 82714 Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
1 1 1 0 SCOP 82693 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
1 1 1 0 SCOP 54675 Nicotinate/Quinolinate PRTase N-terminal domain-like
1 1 1 0 SCOP 55904 Ornithine decarboxylase C-terminal domain
1 1 1 1 SCOP 47446 Signal peptide-binding domain
1 1 1 0 SCOP 54991 Anticodon-binding domain of PheRS
1 1 1 0 SCOP 116742 eIF2alpha middle domain-like
1 1 1 0 SCOP 47928 N-terminal domain of the delta subunit of the F1F0-ATP synthase
1 1 1 0 SCOP 48350 GTPase activation domain, GAP
1 1 1 0 SCOP 49723 Lipase/lipooxygenase domain (PLAT/LH2 domain)
1 1 1 1 SCOP 89817 Mago nashi protein
1 1 1 0 SCOP 118359 Expressed protein At2g23090/F21P24.15
1 1 1 1 SCOP 63570 PABC (PABP) domain
1 1 1 0 SCOP 89837 Doublecortin (DC)
1 1 1 0 SCOP 57889 Cysteine-rich domain
1 1 1 0 SCOP 57924 Inhibitor of apoptosis (IAP) repeat
1 1 1 1 SCOP 140984 PTPA-like
1 1 1 0 SCOP 116846 MIT domain
1 1 1 0 SCOP 57440 Kringle-like
1 1 1 0 SCOP 110004 Glycolipid transfer protein, GLTP
1 1 1 1 SCOP 55481 N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1
1 1 1 0 SCOP 50084 Myosin S1 fragment, N-terminal domain
1 1 1 0 SCOP 48425 Sec7 domain
1 1 1 0 SCOP 140102 ISY1 domain-like
1 1 1 0 SCOP 81531 Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 1 SCOP 47216 Proteasome activator
1 1 1 0 SCOP 143875 ERH-like
1 1 1 0 SCOP 57756 Retrovirus zinc finger-like domains
1 1 1 0 SCOP 57586 TNF receptor-like
1 1 1 0 SCOP 54368 Glutamine synthetase, N-terminal domain
1 1 1 0 SCOP 143791 DUSP-like
1 1 1 0 SCOP 101233 PWI domain
1 1 1 0 SCOP 57774 Microbial and mitochondrial ADK, insert "zinc finger" domain
1 1 1 0 SCOP 54529 Mitochondrial glycoprotein MAM33-like
1 1 1 0 SCOP 100897 Plant proteinase inhibitors
1 1 1 1 SCOP 46609 Fe,Mn superoxide dismutase (SOD), N-terminal domain
1 1 1 1 SCOP 117018 ATP-dependent DNA ligase DNA-binding domain
1 1 1 0 SCOP 110993 eIF-2-alpha, C-terminal domain
1 1 1 1 SCOP 89942 eEF1-gamma domain
1 1 1 0 SCOP 102848 NSFL1 (p97 ATPase) cofactor p47, SEP domain
1 1 1 0 SCOP 48168 R1 subunit of ribonucleotide reductase, N-terminal domain
1 1 1 0 SCOP 160527 V-type ATPase subunit E-like
1 1 1 1 SCOP 50989 Clathrin heavy-chain terminal domain
1 1 1 1 SCOP 81382 Skp1 dimerisation domain-like
1 1 1 0 SCOP 159065 Dom34/Pelota N-terminal domain-like
1 1 1 1 SCOP 140924 Duffy binding domain-like
1 1 1 0 SCOP 101931 Pym (Within the bgcn gene intron protein, WIBG), N-terminal domain
1 1 1 0 SCOP 143575 GAS2 domain-like
1 1 1 1 SCOP 56741 Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment
1 1 1 0 SCOP 63862 Thiamin pyrophosphokinase, substrate-binding domain
1 1 1 0 SCOP 55711 Subdomain of clathrin and coatomer appendage domain
1 1 1 0 SCOP 55003 PAP/Archaeal CCA-adding enzyme, C-terminal domain
1 1 1 0 SCOP 140612 EB1 dimerisation domain-like
1 1 1 0 SCOP 160897 Taf5 N-terminal domain-like
1 1 1 0 SCOP 116878 TrmE connector domain
1 1 1 0 SCOP 64586 C-terminal domain of ProRS
1 1 1 0 SCOP 51064 Head domain of nucleotide exchange factor GrpE
1 1 1 0 SCOP 140586 Dcp2 domain-like
1 1 1 0 SCOP 75445 D-ribose-5-phosphate isomerase (RpiA), lid domain
1 1 1 1 SCOP 101353 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
1 1 1 0 SCOP 81496 Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor
1 1 1 0 SCOP 81502 ISP transmembrane anchor
1 1 1 0 SCOP 64383 Cell-division protein ZipA, C-terminal domain
1 1 1 0 SCOP 101821 Aminopeptidase/glucanase lid domain
1 1 1 0 SCOP 53150 DNA repair protein MutS, domain II
1 1 1 0 SCOP 47802 DNA polymerase beta, N-terminal domain-like
1 1 1 0 SCOP 81799 Putative methyltransferase TM0872, insert domain
1 1 1 0 SCOP 102741 Obg GTP-binding protein C-terminal domain
1 1 1 0 SCOP 46919 N-terminal Zn binding domain of HIV integrase
1 1 1 0 SCOP 50122 DNA-binding domain of retroviral integrase
1 1 1 0 SCOP 109728 Hypothetical protein AF0491, middle domain
1 1 1 0 SCOP 101238 XPC-binding domain
1 1 1 1 SCOP 82910 Apical membrane antigen 1
1 1 1 0 SCOP 158230 PRP4-like

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The following superfamilies have one or more weak hits:

SCOP superfamily Myosin rod fragments
SCOP superfamily Troponin coil-coiled subunits
SCOP superfamily Neurotransmitter-gated ion-channel transmembrane pore
SCOP superfamily Hypothetical protein TM0875
SCOP superfamily Hypothetical protein YjiA, C-terminal domain
SCOP superfamily Hypothetical protein Yml108w
SCOP superfamily Proguanylin
SCOP superfamily Gametocyte protein Pfg27
SCOP superfamily TorD-like
SCOP superfamily GatB/YqeY motif
SCOP superfamily Cobalamin adenosyltransferase-like
SCOP superfamily GAT-like domain
SCOP superfamily Sigma2 domain of RNA polymerase sigma factors
SCOP superfamily ssDNA viruses
SCOP superfamily Positive stranded ssRNA viruses
SCOP superfamily Mechanosensitive channel protein MscS (YggB), transmembrane region
SCOP superfamily R3H domain
SCOP superfamily SEA domain
SCOP superfamily Probable GTPase Der, C-terminal domain
SCOP superfamily DAK1/DegV-like
SCOP superfamily FAS1 domain
SCOP superfamily MIR domain
SCOP superfamily Orange carotenoid protein, N-terminal domain
SCOP superfamily Plasmid maintenance system epsilon/zeta, antidote epsilon subunit
SCOP superfamily Photosystem II reaction centre subunit H, transmembrane region
SCOP superfamily Bacterial photosystem II reaction centre, L and M subunits
SCOP superfamily Mitochondrial cytochrome c oxidase subunit VIc
SCOP superfamily Mitochondrial cytochrome c oxidase subunit VIa
SCOP superfamily Mitochondrial cytochrome c oxidase subunit IV
SCOP superfamily F-box domain
SCOP superfamily Family A G protein-coupled receptor-like
SCOP superfamily Chemotaxis phosphatase CheZ
SCOP superfamily Mitotic arrest deficient-like 1, Mad1
SCOP superfamily Rotavirus NSP2 fragment, N-terminal domain
SCOP superfamily Rotavirus NSP2 fragment, C-terminal domain
SCOP superfamily 3-carboxy-cis,cis-mucoante lactonizing enzyme
SCOP superfamily Major surface antigen p30, SAG1
SCOP superfamily Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha)
SCOP superfamily Lamin A/C globular tail domain
SCOP superfamily Translin
SCOP superfamily Arp2/3 complex subunits
SCOP superfamily HemD-like
SCOP superfamily Phage fibre proteins
SCOP superfamily C-terminal domain of adenylylcyclase associated protein
SCOP superfamily Penicillin-binding protein associated domain
SCOP superfamily Integrin domains
SCOP superfamily Arp2/3 complex 16 kDa subunit ARPC5
SCOP superfamily Glutamyl tRNA-reductase dimerization domain
SCOP superfamily RNase III domain-like
SCOP superfamily alpha-ketoacid dehydrogenase kinase, N-terminal domain
SCOP superfamily RecG, N-terminal domain
SCOP superfamily Recombination endonuclease VII, C-terminal and dimerization domains
SCOP superfamily F1 ATPase inhibitor, IF1, C-terminal domain
SCOP superfamily SAND domain-like
SCOP superfamily PTS-regulatory domain, PRD
SCOP superfamily Outer surface protein C (OspC)
SCOP superfamily Frizzled cysteine-rich domain
SCOP superfamily BAG domain
SCOP superfamily Bacterial hemolysins
SCOP superfamily Clostridium neurotoxins, "coiled-coil" domain
SCOP superfamily Virus ectodomain
SCOP superfamily Influenza hemagglutinin (stalk)
SCOP superfamily Outer membrane lipoprotein
SCOP superfamily Multimerization domain of the phosphoprotein from sendai virus
SCOP superfamily Fibrinogen coiled-coil and central regions
SCOP superfamily Assembly domain of cartilage oligomeric matrix protein
SCOP superfamily Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain
SCOP superfamily Antifungal protein (AGAFP)
SCOP superfamily Serine protease inhibitors
SCOP superfamily Trefoil
SCOP superfamily Scorpion toxin-like
SCOP superfamily Plant lectins/antimicrobial peptides
SCOP superfamily Lipovitellin-phosvitin complex; beta-sheet shell regions
SCOP superfamily OMPA-like
SCOP superfamily delta-Endotoxin (insectocide), N-terminal domain
SCOP superfamily Colicin
SCOP superfamily Dehydroquinate synthase-like
SCOP superfamily Serpins
SCOP superfamily Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
SCOP superfamily Penicillin binding protein dimerisation domain
SCOP superfamily Nitric oxide (NO) synthase oxygenase domain
SCOP superfamily Methionine synthase activation domain-like
SCOP superfamily C-type lectin-like
SCOP superfamily Carbon-nitrogen hydrolase
SCOP superfamily Ribonuclease Rh-like
SCOP superfamily 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
SCOP superfamily CytB endotoxin-like
SCOP superfamily Homing endonucleases
SCOP superfamily SH2 domain
SCOP superfamily Origin of replication-binding domain, RBD-like
SCOP superfamily Bactericidal permeability-increasing protein, BPI
SCOP superfamily tRNA-intron endonuclease N-terminal domain-like
SCOP superfamily Pepsin inhibitor-3
SCOP superfamily Peptide methionine sulfoxide reductase
SCOP superfamily ACT-like
SCOP superfamily HMA, heavy metal-associated domain
SCOP superfamily Dimeric alpha+beta barrel
SCOP superfamily Prokaryotic type KH domain (KH-domain type II)
SCOP superfamily Chalcone isomerase
SCOP superfamily Heme-binding protein A (HasA)
SCOP superfamily SecB-like
SCOP superfamily Amine oxidase N-terminal region
SCOP superfamily DNA-binding domain
SCOP superfamily Interleukin 8-like chemokines
SCOP superfamily Lysozyme-like
SCOP superfamily Periplasmic binding protein-like I
SCOP superfamily Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
SCOP superfamily SGNH hydrolase
SCOP superfamily SpoIIaa-like
SCOP superfamily Outer arm dynein light chain 1
SCOP superfamily Barstar-related
SCOP superfamily Glycosyl hydrolases family 6, cellulases
SCOP superfamily Malate synthase G
SCOP superfamily E2 regulatory, transactivation domain
SCOP superfamily Carbohydrate binding domain
SCOP superfamily Sialidases
SCOP superfamily Rap30/74 interaction domains
SCOP superfamily Mannose 6-phosphate receptor domain
SCOP superfamily XRCC4, N-terminal domain
SCOP superfamily Transcription factor IIA (TFIIA), beta-barrel domain
SCOP superfamily STI-like
SCOP superfamily Agglutinin
SCOP superfamily PRC-barrel domain
SCOP superfamily C-terminal domain of transcriptional repressors
SCOP superfamily gp9
SCOP superfamily Amine oxidase catalytic domain
SCOP superfamily Baculovirus p35 protein
SCOP superfamily Osmotin, thaumatin-like protein
SCOP superfamily Hyaluronate lyase-like, C-terminal domain
SCOP superfamily Viral protein domain
SCOP superfamily Group II dsDNA viruses VP
SCOP superfamily Neurophysin II
SCOP superfamily Cna protein B-type domain
SCOP superfamily p53-like transcription factors
SCOP superfamily Alpha-macroglobulin receptor domain
SCOP superfamily Purple acid phosphatase, N-terminal domain
SCOP superfamily Multiheme cytochromes
SCOP superfamily Moesin tail domain
SCOP superfamily Tetraspanin
SCOP superfamily Phospholipase A2, PLA2
SCOP superfamily Heme oxygenase-like
SCOP superfamily Chorismate mutase II
SCOP superfamily Serum albumin-like
SCOP superfamily gene 59 helicase assembly protein
SCOP superfamily Lipoxigenase
SCOP superfamily Ras GEF
SCOP superfamily Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
SCOP superfamily Acid phosphatase/Vanadium-dependent haloperoxidase
SCOP superfamily Ribosomal protein L7/12, oligomerisation (N-terminal) domain
SCOP superfamily TrpR-like
SCOP superfamily Cytochrome P450
SCOP superfamily Chondroitin AC/alginate lyase
SCOP superfamily Six-hairpin glycosidases
SCOP superfamily Uteroglobin-like
SCOP superfamily Influenza virus matrix protein M1
SCOP superfamily Regulator of G-protein signaling, RGS
SCOP superfamily DBL homology domain (DH-domain)
SCOP superfamily Hemocyanin, N-terminal domain
SCOP superfamily FliG
SCOP superfamily N-terminal domain of DnaB helicase
SCOP superfamily NusB-like
SCOP superfamily Functional domain of the splicing factor Prp18
SCOP superfamily ERP29 C domain-like
SCOP superfamily Transducin (alpha subunit), insertion domain
SCOP superfamily PAH2 domain
SCOP superfamily Chemotaxis receptor methyltransferase CheR, N-terminal domain
SCOP superfamily Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
SCOP superfamily Transferrin receptor-like dimerisation domain
SCOP superfamily STAT
SCOP superfamily Insect pheromone/odorant-binding proteins
SCOP superfamily HLH, helix-loop-helix DNA-binding domain
SCOP superfamily Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit
SCOP superfamily Homodimeric domain of signal transducing histidine kinase
SCOP superfamily 4-helical cytokines
SCOP superfamily TMV-like viral coat proteins
SCOP superfamily Hemerythrin-like
SCOP superfamily Apolipoprotein
SCOP superfamily Diol dehydratase, gamma subunit
SCOP superfamily Fertilization protein
SCOP superfamily RAP domain-like
SCOP superfamily Second domain of FERM
SCOP superfamily Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
SCOP superfamily Ribosomal protein S20
SCOP superfamily Spectrin repeat
SCOP superfamily C-terminal UvrC-binding domain of UvrB
SCOP superfamily Globin-like
SCOP superfamily PspA lactotransferrin-binding region
SCOP superfamily Zinc hairpin stack
SCOP superfamily YfgJ-like
SCOP superfamily MAPEG domain-like
SCOP superfamily ATP synthase D chain-like
SCOP superfamily Viral glycoprotein ectodomain-like
SCOP superfamily flu NP-like
SCOP superfamily SSO1389-like
SCOP superfamily Poly(A) polymerase catalytic subunit-like
SCOP superfamily PH0156-like
SCOP superfamily NE1680-like
SCOP superfamily YNR034W-A-like
SCOP superfamily FLJ32549 C-terminal domain-like
SCOP superfamily BT0923-like
SCOP superfamily YdfO-like
SCOP superfamily Bacterial polysaccharide co-polymerase-like
SCOP superfamily Rnp2-like
SCOP superfamily YcgL-like
SCOP superfamily Acetoacetate decarboxylase-like
SCOP superfamily PriA/YqbF domain
SCOP superfamily MM3350-like
SCOP superfamily PH1570-like
SCOP superfamily YdhG-like
SCOP superfamily CdCA1 repeat-like
SCOP superfamily YerB-like
SCOP superfamily XCC0632-like
SCOP superfamily EreA/ChaN-like
SCOP superfamily Plus3-like
SCOP superfamily WSSV envelope protein-like
SCOP superfamily Smr-associated domain-like
SCOP superfamily PMT central region-like
SCOP superfamily AGR C 984p-like
SCOP superfamily Tex N-terminal region-like
SCOP superfamily MgtE N-terminal domain-like
SCOP superfamily Sama2622-like
SCOP superfamily YheA/YmcA-like
SCOP superfamily BH3980-like
SCOP superfamily TAFH domain-like
SCOP superfamily FLJ32549 domain-like
SCOP superfamily GspK insert domain-like
SCOP superfamily Bacillus cereus metalloprotein-like
SCOP superfamily TM1646-like
SCOP superfamily YvfG-like
SCOP superfamily AF1782-like
SCOP superfamily YnzC-like
SCOP superfamily occludin/ELL-like
SCOP superfamily Sec2 N-terminal region
SCOP superfamily MPN010-like
SCOP superfamily ORC1-binding domain
SCOP superfamily YbiA-like
SCOP superfamily L,D-transpeptidase pre-catalytic domain-like
SCOP superfamily RGC domain-like
SCOP superfamily PF0523-like
SCOP superfamily CorA soluble domain-like
SCOP superfamily XisI-like
SCOP superfamily YwmB-like
SCOP superfamily PHP14-like
SCOP superfamily TM1622-like
SCOP superfamily WGR domain-like
SCOP superfamily YktB/PF0168-like
SCOP superfamily CAC2185-like
SCOP superfamily CofD-like
SCOP superfamily LD-carboxypeptidase A C-terminal domain-like
SCOP superfamily Bacteriophage trimeric proteins domain
SCOP superfamily Glu-tRNAGln amidotransferase C subunit
SCOP superfamily DNA terminal protein
SCOP superfamily PriB N-terminal domain-like
SCOP superfamily SipA N-terminal domain-like
SCOP superfamily AF0941-like
SCOP superfamily IpaD-like
SCOP superfamily YfmB-like
SCOP superfamily Hyaluronidase post-catalytic domain-like
SCOP superfamily EF2947-like
SCOP superfamily FlgN-like
SCOP superfamily BAS1536-like
SCOP superfamily MW0975(SA0943)-like
SCOP superfamily YppE-like
SCOP superfamily Endosomal sorting complex assembly domain
SCOP superfamily Calcyclin-binding protein-like
SCOP superfamily Vasodilator-stimulated phosphoprotein, VASP, tetramerisation domain
SCOP superfamily HSP33 redox switch-like
SCOP superfamily Variant surface glycoprotein MITAT 1.2, VSG 221, C-terminal domain
SCOP superfamily Proton glutamate symport protein
SCOP superfamily TM1457-like
SCOP superfamily Flagellar hook protein flgE
SCOP superfamily RNA-binding protein She2p
SCOP superfamily EspA/CesA-like
SCOP superfamily XseB-like
SCOP superfamily DNA methylase specificity domain
SCOP superfamily Fzo-like conserved region
SCOP superfamily Geminin coiled-coil domain
SCOP superfamily OmpH-like
SCOP superfamily VP4 membrane interaction domain
SCOP superfamily Rap/Ran-GAP
SCOP superfamily Recombination protein RecR
SCOP superfamily ParB/Sulfiredoxin
SCOP superfamily Her-1
SCOP superfamily Hypothetical protein MG354
SCOP superfamily DinB/YfiT-like putative metalloenzymes
SCOP superfamily Cag-Z
SCOP superfamily Bacteriocin immunity protein-like
SCOP superfamily Alpha-hemoglobin stabilizing protein AHSP
SCOP superfamily DEK C-terminal domain
SCOP superfamily Plexin repeat
SCOP superfamily Virulence-associated V antigen
SCOP superfamily OmpA-like
SCOP superfamily Hypothetical protein YwqG
SCOP superfamily mRNA decapping enzyme DcpS N-terminal domain
SCOP superfamily NIF3 (NGG1p interacting factor 3)-like
SCOP superfamily Alpha-2,3/8-sialyltransferase CstII
SCOP superfamily Sema domain
SCOP superfamily NHL repeat
SCOP superfamily PAZ domain
SCOP superfamily Smp-1-like
SCOP superfamily Supernatant protein factor (SPF), C-terminal domain
SCOP superfamily Fungal immunomodulatory protein, FIP
SCOP superfamily Stathmin
SCOP superfamily C-terminal domain of Ku80
SCOP superfamily Superantigen MAM
SCOP superfamily Invasion protein A (SipA) , C-terminal actin binding domain
SCOP superfamily Flagellar export chaperone FliS
SCOP superfamily Staphylocoagulase
SCOP superfamily Typo IV secretion system protein TraC
SCOP superfamily Chemosensory protein Csp2
SCOP superfamily IP3 receptor type 1 binding core, domain 2

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