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Pandoraea sp. RB-44 superfamily assignments

Taxonomy
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Fasta format sequences
Domain assignments


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Assignment statistics

Sequences: 4781 total
3487 (73 %) with assignment
320 average length
68 % amino acid coverage
Domains: 5037 total
765 unique superfamilies
676 unique families
299 average length
6.6 average superfamily size
85 % formed by duplication
Domain combinations: 488 domain pairs
1243 unique architectures

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Superfamily assignments

Domains

Proteins

Architectures

Families

SCOP link

Superfamilies

279 250 72 9 SCOP 52540 P-loop containing nucleoside triphosphate hydrolases
274 270 23 2 SCOP 46785 "Winged helix" DNA-binding domain
195 195 8 1 SCOP 53850 Periplasmic binding protein-like II
142 142 25 10 SCOP 51735 NAD(P)-binding Rossmann-fold domains
129 129 5 0 SCOP 103473 MFS general substrate transporter
91 78 28 0 SCOP 46689 Homeodomain-like
76 70 3 1 SCOP 161098 MetI-like
66 61 24 5 SCOP 51905 FAD/NAD(P)-binding domain
61 60 10 5 SCOP 52833 Thioredoxin-like
60 60 5 4 SCOP 53383 PLP-dependent transferases
58 57 6 9 SCOP 53474 alpha/beta-Hydrolases
51 50 13 12 SCOP 53335 S-adenosyl-L-methionine-dependent methyltransferases
50 50 17 1 SCOP 52172 CheY-like
46 45 8 9 SCOP 51182 RmlC-like cupins
45 26 5 1 SCOP 103481 Multidrug resistance efflux transporter EmrE
41 33 22 4 SCOP 50249 Nucleic acid-binding proteins
40 40 22 3 SCOP 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
37 37 3 2 SCOP 56935 Porins
37 37 12 0 SCOP 55781 GAF domain-like
34 34 3 2 SCOP 53720 ALDH-like
34 28 13 1 SCOP 48452 TPR-like
33 30 7 4 SCOP 52096 ClpP/crotonase
32 16 7 4 SCOP 52518 Thiamin diphosphate-binding fold (THDP-binding)
30 27 10 4 SCOP 52402 Adenine nucleotide alpha hydrolases-like
30 30 2 0 SCOP 48008 GntR ligand-binding domain-like
29 29 8 3 SCOP 55729 Acyl-CoA N-acyltransferases (Nat)
29 29 17 1 SCOP 55073 Nucleotide cyclase
29 29 8 1 SCOP 46894 C-terminal effector domain of the bipartite response regulators
28 28 4 1 SCOP 53822 Periplasmic binding protein-like I
28 24 20 0 SCOP 55785 PYP-like sensor domain (PAS domain)
27 25 9 0 SCOP 47413 lambda repressor-like DNA-binding domains
26 26 11 2 SCOP 54292 2Fe-2S ferredoxin-like
26 26 2 1 SCOP 56801 Acetyl-CoA synthetase-like
26 26 12 0 SCOP 47384 Homodimeric domain of signal transducing histidine kinase
25 25 9 10 SCOP 51556 Metallo-dependent hydrolases
25 17 10 0 SCOP 46626 Cytochrome c
25 13 3 2 SCOP 53901 Thiolase-like
25 8 5 1 SCOP 82693 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
24 24 5 4 SCOP 53187 Zn-dependent exopeptidases
24 21 5 2 SCOP 48179 6-phosphogluconate dehydrogenase C-terminal domain-like
23 23 3 3 SCOP 54593 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
22 12 5 4 SCOP 53067 Actin-like ATPase domain
22 21 12 2 SCOP 63380 Riboflavin synthase domain-like
21 21 8 3 SCOP 53448 Nucleotide-diphospho-sugar transferases
21 21 6 2 SCOP 56784 HAD-like
21 21 6 4 SCOP 53098 Ribonuclease H-like
21 18 15 9 SCOP 54211 Ribosomal protein S5 domain 2-like
21 21 3 2 SCOP 54909 Dimeric alpha+beta barrel
20 12 6 1 SCOP 52821 Rhodanese/Cell cycle control phosphatase
20 20 2 4 SCOP 53756 UDP-Glycosyltransferase/glycogen phosphorylase
20 17 7 1 SCOP 51338 Composite domain of metallo-dependent hydrolases
20 20 2 1 SCOP 47616 GST C-terminal domain-like
20 11 7 1 SCOP 82866 Multidrug efflux transporter AcrB transmembrane domain
19 19 6 6 SCOP 51569 Aldolase
19 18 2 1 SCOP 54637 Thioesterase/thiol ester dehydrase-isomerase
19 14 4 1 SCOP 111369 HlyD-like secretion proteins
19 19 4 1 SCOP 56645 Acyl-CoA dehydrogenase NM domain-like
19 19 10 2 SCOP 52343 Ferredoxin reductase-like, C-terminal NADP-linked domain
18 18 5 5 SCOP 56235 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
18 18 4 1 SCOP 54427 NTF2-like
18 18 3 1 SCOP 56529 FAH
18 18 3 1 SCOP 47203 Acyl-CoA dehydrogenase C-terminal domain-like
17 16 10 3 SCOP 56059 Glutathione synthetase ATP-binding domain-like
17 17 10 3 SCOP 52317 Class I glutamine amidotransferase-like
17 17 11 3 SCOP 52374 Nucleotidylyl transferase
17 17 3 2 SCOP 47240 Ferritin-like
17 16 6 3 SCOP 100950 NagB/RpiA/CoA transferase-like
17 17 4 2 SCOP 50475 FMN-binding split barrel
17 14 5 0 SCOP 88659 Sigma3 and sigma4 domains of RNA polymerase sigma factors
17 17 7 2 SCOP 54373 FAD-linked reductases, C-terminal domain
16 15 2 2 SCOP 69118 AhpD-like
16 16 2 0 SCOP 48498 Tetracyclin repressor-like, C-terminal domain
16 16 7 2 SCOP 56176 FAD-binding/transporter-associated domain-like
16 16 9 1 SCOP 58104 Methyl-accepting chemotaxis protein (MCP) signaling domain
16 3 3 0 SCOP 101967 Adhesin YadA, collagen-binding domain
16 8 5 1 SCOP 82714 Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
15 14 3 1 SCOP 50129 GroES-like
15 14 10 1 SCOP 54534 FKBP-like
15 15 8 1 SCOP 54631 CBS-domain pair
15 15 6 2 SCOP 56601 beta-lactamase/transpeptidase-like
15 15 3 1 SCOP 56954 Outer membrane efflux proteins (OEP)
15 14 3 0 SCOP 50331 MOP-like
14 13 9 2 SCOP 50447 Translation proteins
14 14 10 0 SCOP 141868 EAL domain-like
14 14 8 3 SCOP 53955 Lysozyme-like
14 13 3 1 SCOP 89796 CoA-transferase family III (CaiB/BaiF)
14 10 9 1 SCOP 55021 ACT-like
13 13 5 3 SCOP 53697 SIS domain
13 13 9 2 SCOP 54862 4Fe-4S ferredoxins
13 13 11 2 SCOP 55681 Class II aaRS and biotin synthetases
13 13 6 5 SCOP 51621 Phosphoenolpyruvate/pyruvate domain
13 13 4 3 SCOP 56281 Metallo-hydrolase/oxidoreductase
13 13 4 3 SCOP 102114 Radical SAM enzymes
13 13 1 0 SCOP 55298 YjgF-like
13 12 3 2 SCOP 55961 Bet v1-like
13 13 5 1 SCOP 46955 Putative DNA-binding domain
13 13 4 1 SCOP 88946 Sigma2 domain of RNA polymerase sigma factors
13 13 1 1 SCOP 55031 Bacterial exopeptidase dimerisation domain
12 12 5 1 SCOP 51395 FMN-linked oxidoreductases
12 12 2 3 SCOP 52283 Formate/glycerate dehydrogenase catalytic domain-like
12 12 3 1 SCOP 50022 ISP domain
12 12 4 3 SCOP 52467 DHS-like NAD/FAD-binding domain
12 12 3 3 SCOP 55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
11 10 4 2 SCOP 53271 PRTase-like
11 11 3 5 SCOP 53659 Isocitrate/Isopropylmalate dehydrogenase-like
11 11 3 1 SCOP 53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes
11 11 5 1 SCOP 55811 Nudix
11 11 5 2 SCOP 52016 LeuD/IlvD-like
11 10 5 0 SCOP 54523 Pili subunits
11 6 6 1 SCOP 56024 Phospholipase D/nuclease
11 10 5 2 SCOP 52440 PreATP-grasp domain
10 10 4 3 SCOP 52218 Flavoproteins
10 10 6 1 SCOP 55174 Alpha-L RNA-binding motif
10 10 8 1 SCOP 109604 HD-domain/PDEase-like
10 10 6 1 SCOP 56349 DNA breaking-rejoining enzymes
10 10 6 0 SCOP 103515 Autotransporter
10 10 7 1 SCOP 53706 Formate dehydrogenase/DMSO reductase, domains 1-3
10 10 4 0 SCOP 55103 FAD-linked oxidases, C-terminal domain
9 7 4 2 SCOP 54506 Diaminopimelate epimerase-like
9 9 6 1 SCOP 51126 Pectin lyase-like
9 9 2 3 SCOP 51197 Clavaminate synthase-like
9 8 5 1 SCOP 49503 Cupredoxins
9 8 7 3 SCOP 81301 Nucleotidyltransferase
9 9 6 2 SCOP 50692 ADC-like
9 6 5 0 SCOP 50156 PDZ domain-like
9 5 3 1 SCOP 54980 EF-G C-terminal domain-like
8 8 2 3 SCOP 53613 Ribokinase-like
8 8 1 3 SCOP 51366 Ribulose-phoshate binding barrel
8 8 5 3 SCOP 55120 Pseudouridine synthase
8 8 4 1 SCOP 56300 Metallo-dependent phosphatases
8 8 5 5 SCOP 51161 Trimeric LpxA-like enzymes
8 8 2 2 SCOP 81342 Transmembrane di-heme cytochromes
8 8 4 0 SCOP 47598 Ribbon-helix-helix
8 6 5 0 SCOP 50341 CheW-like
8 7 6 1 SCOP 51230 Single hybrid motif
8 8 4 1 SCOP 53244 MurD-like peptide ligases, peptide-binding domain
8 8 4 2 SCOP 53623 MurD-like peptide ligases, catalytic domain
7 7 3 1 SCOP 56112 Protein kinase-like (PK-like)
7 7 6 2 SCOP 55486 Metalloproteases ("zincins"), catalytic domain
7 7 1 2 SCOP 56796 Dehydroquinate synthase-like
7 7 5 0 SCOP 50182 Sm-like ribonucleoproteins
7 7 3 1 SCOP 81296 E set domains
7 7 2 1 SCOP 52151 FabD/lysophospholipase-like
7 7 3 1 SCOP 56524 Oxidoreductase molybdopterin-binding domain
7 7 3 0 SCOP 103088 OmpA-like
7 6 6 2 SCOP 47781 RuvA domain 2-like
7 7 7 1 SCOP 46548 alpha-helical ferredoxin
7 7 6 1 SCOP 47323 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
7 7 3 4 SCOP 53223 Aminoacid dehydrogenase-like, N-terminal domain
7 7 4 0 SCOP 81665 Calcium ATPase, transmembrane domain M
7 7 4 0 SCOP 81653 Calcium ATPase, transduction domain A
6 6 1 1 SCOP 75304 Amidase signature (AS) enzymes
6 6 4 3 SCOP 75217 alpha/beta knot
6 6 4 2 SCOP 52980 Restriction endonuclease-like
6 6 5 1 SCOP 109998 Triger factor/SurA peptide-binding domain-like
6 6 1 2 SCOP 82784 OsmC-like
6 6 1 2 SCOP 48557 L-aspartase-like
6 6 1 2 SCOP 53254 Phosphoglycerate mutase-like
6 6 1 1 SCOP 81452 Cytochrome c oxidase subunit III-like
6 6 5 1 SCOP 51419 PLP-binding barrel
6 6 1 1 SCOP 51430 NAD(P)-linked oxidoreductase
6 6 3 1 SCOP 54001 Cysteine proteinases
6 6 1 0 SCOP 53639 AraD/HMP-PK domain-like
6 6 3 0 SCOP 110849 ParB/Sulfiredoxin
6 5 4 1 SCOP 55008 HMA, heavy metal-associated domain
6 6 4 1 SCOP 53732 Aconitase iron-sulfur domain
6 6 5 2 SCOP 88697 PUA domain-like
6 6 2 1 SCOP 64288 Chorismate lyase-like
6 6 5 1 SCOP 55424 FAD/NAD-linked reductases, dimerisation (C-terminal) domain
6 4 3 1 SCOP 56003 Molybdenum cofactor-binding domain
6 6 2 1 SCOP 51246 Rudiment single hybrid motif
6 6 3 1 SCOP 52922 TK C-terminal domain-like
6 3 2 1 SCOP 53681 Aspartate/glutamate racemase
6 2 1 1 SCOP 53738 Phosphoglucomutase, first 3 domains
5 5 4 2 SCOP 50104 Translation proteins SH3-like domain
5 5 4 1 SCOP 57716 Glucocorticoid receptor-like (DNA-binding domain)
5 5 2 1 SCOP 55920 Creatinase/aminopeptidase
5 5 2 1 SCOP 47729 IHF-like DNA-binding proteins
5 5 4 2 SCOP 53633 Carbamate kinase-like
5 5 4 3 SCOP 48150 DNA-glycosylase
5 5 2 1 SCOP 51412 Inosine monophosphate dehydrogenase (IMPDH)
5 5 1 1 SCOP 48576 Terpenoid synthases
5 4 3 0 SCOP 55469 FMN-dependent nitroreductase-like
5 5 5 1 SCOP 47226 Histidine-containing phosphotransfer domain, HPT domain
5 3 2 2 SCOP 51726 UROD/MetE-like
5 5 3 1 SCOP 88723 PIN domain-like
5 4 4 0 SCOP 48403 Ankyrin repeat
5 5 4 1 SCOP 51445 (Trans)glycosidases
5 5 3 1 SCOP 56317 Carbon-nitrogen hydrolase
5 5 2 1 SCOP 81442 Cytochrome c oxidase subunit I-like
5 5 2 1 SCOP 55620 Tetrahydrobiopterin biosynthesis enzymes-like
5 5 3 1 SCOP 102405 MCP/YpsA-like
5 5 1 0 SCOP 55331 Tautomerase/MIF
5 5 3 0 SCOP 82689 Mechanosensitive channel protein MscS (YggB), C-terminal domain
5 4 4 0 SCOP 141371 PilZ domain-like
5 5 2 0 SCOP 109709 KorB DNA-binding domain-like
5 3 3 1 SCOP 56014 Nitrite and sulphite reductase 4Fe-4S domain-like
5 5 5 0 SCOP 103190 Sensory domain-like
5 5 3 1 SCOP 81464 Cytochrome c oxidase subunit II-like, transmembrane region
5 4 2 1 SCOP 56042 PurM C-terminal domain-like
5 5 3 1 SCOP 56425 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
5 4 2 1 SCOP 55326 PurM N-terminal domain-like
5 3 3 0 SCOP 55124 Nitrite/Sulfite reductase N-terminal domain-like
5 5 1 1 SCOP 143975 IlvD/EDD N-terminal domain-like
4 4 2 1 SCOP 53790 Tetrapyrrole methylase
4 4 1 1 SCOP 51658 Xylose isomerase-like
4 4 2 1 SCOP 51316 Mss4-like
4 3 2 1 SCOP 64518 Phase 1 flagellin
4 4 1 1 SCOP 48256 Citrate synthase
4 4 3 2 SCOP 50891 Cyclophilin-like
4 4 1 0 SCOP 48317 Acid phosphatase/Vanadium-dependent haloperoxidase
4 4 3 1 SCOP 53328 Formyltransferase
4 4 2 1 SCOP 53649 Alkaline phosphatase-like
4 2 1 1 SCOP 49785 Galactose-binding domain-like
4 4 2 1 SCOP 56752 D-aminoacid aminotransferase-like PLP-dependent enzymes
4 4 3 1 SCOP 51306 LexA/Signal peptidase
4 4 1 2 SCOP 88713 Glycoside hydrolase/deacetylase
4 4 1 2 SCOP 52768 Arginase/deacetylase
4 4 4 4 SCOP 55931 Glutamine synthetase/guanido kinase
4 4 4 0 SCOP 89550 PHP domain-like
4 4 3 1 SCOP 81340 Clc chloride channel
4 4 3 2 SCOP 53218 Molybdenum cofactor biosynthesis proteins
4 4 2 1 SCOP 56219 DNase I-like
4 4 2 1 SCOP 53213 LigB-like
4 2 1 0 SCOP 63411 LuxS/MPP-like metallohydrolase
4 3 3 1 SCOP 54814 Prokaryotic type KH domain (KH-domain type II)
4 4 2 1 SCOP 56925 OMPA-like
4 4 2 2 SCOP 51604 Enolase C-terminal domain-like
4 4 1 0 SCOP 74653 TolA/TonB C-terminal domain
4 4 2 1 SCOP 50465 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
4 4 2 1 SCOP 90123 ABC transporter transmembrane region
4 4 2 1 SCOP 160544 EscU C-terminal domain-like
4 4 3 1 SCOP 56719 Type II DNA topoisomerase
4 4 3 0 SCOP 158472 HAMP domain-like
4 3 3 1 SCOP 52210 Succinyl-CoA synthetase domains
4 3 3 0 SCOP 116726 TrkA C-terminal domain-like
4 4 1 0 SCOP 51215 Regulatory protein AraC
4 4 2 1 SCOP 53671 Aspartate/ornithine carbamoyltransferase
4 4 2 0 SCOP 82861 Mechanosensitive channel protein MscS (YggB), transmembrane region
4 4 2 0 SCOP 47741 CO dehydrogenase ISP C-domain like
4 4 4 1 SCOP 81271 TGS-like
3 3 3 1 SCOP 53167 Purine and uridine phosphorylases
3 3 2 2 SCOP 53927 Cytidine deaminase-like
3 3 2 2 SCOP 52141 Uracil-DNA glycosylase-like
3 3 1 1 SCOP 56420 Peptide deformylase
3 3 2 0 SCOP 69593 Glycerol-3-phosphate (1)-acyltransferase
3 3 1 1 SCOP 75620 Release factor
3 3 2 1 SCOP 109755 PhoU-like
3 3 1 0 SCOP 54285 MoaD/ThiS
3 3 1 1 SCOP 56655 Carbohydrate phosphatase
3 3 1 1 SCOP 55205 EPT/RTPC-like
3 3 1 1 SCOP 81345 ABC transporter involved in vitamin B12 uptake, BtuC
3 3 2 1 SCOP 117143 Flagellar hook protein flgE
3 3 2 0 SCOP 54060 His-Me finger endonucleases
3 3 1 0 SCOP 143744 GlcG-like
3 3 3 2 SCOP 56672 DNA/RNA polymerases
3 3 1 1 SCOP 56634 Heme-dependent catalase-like
3 3 1 1 SCOP 52499 Isochorismatase-like hydrolases
3 3 2 1 SCOP 74650 Galactose mutarotase-like
3 3 1 2 SCOP 52972 ITPase-like
3 3 2 1 SCOP 48208 Six-hairpin glycosidases
3 3 2 1 SCOP 46458 Globin-like
3 3 3 1 SCOP 52954 Class II aaRS ABD-related
3 3 3 0 SCOP 102712 JAB1/MPN domain
3 3 1 1 SCOP 64438 CNF1/YfiH-like putative cysteine hydrolases
3 3 2 1 SCOP 50494 Trypsin-like serine proteases
3 2 2 2 SCOP 56266 DmpA/ArgJ-like
3 3 1 1 SCOP 49482 Aromatic compound dioxygenase
3 3 3 0 SCOP 82771 GIY-YIG endonuclease
3 3 1 1 SCOP 53807 "Helical backbone" metal receptor
3 3 1 0 SCOP 51679 Bacterial luciferase-like
3 3 2 0 SCOP 51206 cAMP-binding domain-like
3 3 1 1 SCOP 54913 GlnB-like
3 2 2 0 SCOP 116734 DNA methylase specificity domain
3 3 1 0 SCOP 117396 TM1631-like
3 3 1 0 SCOP 54975 Acylphosphatase/BLUF domain-like
3 3 2 0 SCOP 55826 YbaK/ProRS associated domain
3 3 3 1 SCOP 103025 Folate-binding domain
3 3 3 2 SCOP 52335 Methylglyoxal synthase-like
3 3 2 0 SCOP 57802 Rubredoxin-like
3 3 1 1 SCOP 50814 Lipocalins
3 3 2 1 SCOP 101801 Surface presentation of antigens (SPOA)
3 3 1 0 SCOP 53041 Resolvase-like
3 3 3 1 SCOP 141130 Acetamidase/Formamidase-like
3 2 2 1 SCOP 81593 Nucleotidyltransferase substrate binding subunit/domain
3 3 3 1 SCOP 55186 ThrRS/AlaRS common domain
3 3 2 0 SCOP 46589 tRNA-binding arm
3 3 1 1 SCOP 143865 CorA soluble domain-like
3 1 1 0 SCOP 55979 DNA clamp
3 3 1 0 SCOP 160272 Shew3726-like
3 3 2 1 SCOP 48019 post-AAA+ oligomerization domain-like
3 1 1 1 SCOP 55973 S-adenosylmethionine synthetase
3 2 2 0 SCOP 51971 Nucleotide-binding domain
3 3 2 1 SCOP 52418 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
3 3 2 0 SCOP 142984 Nqo1 middle domain-like
3 3 1 1 SCOP 54826 Enolase N-terminal domain-like
3 3 1 0 SCOP 81660 Metal cation-transporting ATPase, ATP-binding domain N
3 3 1 0 SCOP 144083 Magnesium transport protein CorA, transmembrane region
3 3 2 0 SCOP 47648 Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
3 3 1 1 SCOP 51984 MurCD N-terminal domain
3 3 2 0 SCOP 117892 Band 7/SPFH domain
3 3 2 1 SCOP 50677 ValRS/IleRS/LeuRS editing domain
3 3 2 0 SCOP 140490 Nqo1C-terminal domain-like
3 3 2 1 SCOP 142019 Nqo1 FMN-binding domain-like
3 2 2 1 SCOP 55666 Ribonuclease PH domain 2-like
3 3 2 0 SCOP 89000 post-HMGL domain-like
3 3 2 0 SCOP 56519 Penicillin binding protein dimerisation domain
2 2 2 0 SCOP 48013 NusB-like
2 2 1 0 SCOP 57829 Zn-binding ribosomal proteins
2 2 1 1 SCOP 54197 HIT-like
2 2 1 1 SCOP 53137 Translational machinery components
2 2 2 1 SCOP 46946 S13-like H2TH domain
2 2 1 0 SCOP 89447 AbrB/MazE/MraZ-like
2 2 1 1 SCOP 53597 Dihydrofolate reductase-like
2 2 1 1 SCOP 143800 L28p-like
2 2 1 1 SCOP 51695 PLC-like phosphodiesterases
2 2 1 1 SCOP 55068 Peptide methionine sulfoxide reductase
2 2 2 2 SCOP 51730 FAD-linked oxidoreductase
2 2 1 2 SCOP 55821 YrdC/RibB
2 2 2 0 SCOP 51261 Duplicated hybrid motif
2 2 1 1 SCOP 111283 Putative modulator of DNA gyrase, PmbA/TldD
2 2 1 1 SCOP 51283 dUTPase-like
2 2 1 1 SCOP 89360 HesB-like domain
2 2 2 1 SCOP 50715 Ribosomal protein L25-like
2 2 1 0 SCOP 82657 BolA-like
2 2 2 1 SCOP 50685 Barwin-like endoglucanases
2 2 2 1 SCOP 52949 Macro domain-like
2 2 1 0 SCOP 55315 L30e-like
2 2 2 0 SCOP 48613 Heme oxygenase-like
2 2 2 1 SCOP 56322 ADC synthase
2 1 1 1 SCOP 48239 Terpenoid cyclases/Protein prenyltransferases
2 2 1 1 SCOP 69572 Activating enzymes of the ubiquitin-like proteins
2 2 1 1 SCOP 53774 Glutaminase/Asparaginase
2 2 1 1 SCOP 51645 Malate synthase G
2 2 1 0 SCOP 81343 Fumarate reductase respiratory complex transmembrane subunits
2 2 1 0 SCOP 49777 PEBP-like
2 2 1 1 SCOP 53056 beta-carbonic anhydrase, cab
2 2 2 0 SCOP 52266 SGNH hydrolase
2 2 1 1 SCOP 103378 2-methylcitrate dehydratase PrpD
2 2 1 2 SCOP 55909 Pentein
2 2 1 1 SCOP 52788 Phosphotyrosine protein phosphatases I
2 2 1 1 SCOP 53800 Chelatase
2 1 1 1 SCOP 144020 FdhE-like
2 2 2 0 SCOP 81324 Voltage-gated potassium channels
2 2 2 0 SCOP 52091 SpoIIaa-like
2 2 2 0 SCOP 69635 Type III secretory system chaperone-like
2 2 2 2 SCOP 53795 PEP carboxykinase-like
2 2 2 1 SCOP 51998 PFL-like glycyl radical enzymes
2 1 1 0 SCOP 141571 Pentapeptide repeat-like
2 2 2 1 SCOP 48264 Cytochrome P450
2 2 2 1 SCOP 111352 Ammonium transporter
2 2 2 1 SCOP 57783 Zinc beta-ribbon
2 2 1 0 SCOP 143100 TTHA1013/TTHA0281-like
2 2 2 0 SCOP 117916 Fe-S cluster assembly (FSCA) domain-like
2 2 2 1 SCOP 46767 Methylated DNA-protein cysteine methyltransferase, C-terminal domain
2 2 2 0 SCOP 81901 HCP-like
2 2 1 0 SCOP 53300 vWA-like
2 2 2 0 SCOP 110857 Gamma-glutamyl cyclotransferase-like
2 2 2 1 SCOP 52507 Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
2 2 1 1 SCOP 109854 DinB/YfiT-like putative metalloenzymes
2 2 2 1 SCOP 54736 ClpS-like
2 2 1 0 SCOP 117856 AF0104/ALDC/Ptd012-like
2 2 2 0 SCOP 51391 Thiamin phosphate synthase
2 2 2 1 SCOP 48173 Cryptochrome/photolyase FAD-binding domain
2 2 2 1 SCOP 89095 GatB/YqeY motif
2 2 2 0 SCOP 48600 Chorismate mutase II
2 2 1 0 SCOP 89392 Prokaryotic lipoproteins and lipoprotein localization factors
2 2 1 1 SCOP 118215 Proton glutamate symport protein
2 2 1 0 SCOP 159594 XCC0632-like
2 2 1 0 SCOP 101386 all-alpha NTP pyrophosphatases
2 2 2 1 SCOP 48295 TrpR-like
2 2 2 0 SCOP 53323 Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
2 2 2 0 SCOP 50037 C-terminal domain of transcriptional repressors
2 2 1 0 SCOP 50486 FMT C-terminal domain-like
2 2 1 0 SCOP 82199 SET domain
2 2 1 0 SCOP 142764 YgbK-like
2 1 1 0 SCOP 89963 YajQ-like
2 2 1 0 SCOP 103247 TT1751-like
2 2 2 1 SCOP 103501 Respiratory nitrate reductase 1 gamma chain
2 2 1 0 SCOP 50974 Nitrous oxide reductase, N-terminal domain
2 2 1 0 SCOP 89807 Dodecin-like
2 2 1 1 SCOP 56029 Monooxygenase (hydroxylase) regulatory protein
2 2 1 1 SCOP 52738 Methylesterase CheB, C-terminal domain
2 2 2 1 SCOP 56091 DNA ligase/mRNA capping enzyme, catalytic domain
2 2 2 1 SCOP 46565 Chaperone J-domain
2 2 2 0 SCOP 50346 PRC-barrel domain
2 2 2 1 SCOP 52777 CoA-dependent acyltransferases
2 2 1 0 SCOP 63867 MoeA C-terminal domain-like
2 2 1 1 SCOP 53092 Creatinase/prolidase N-terminal domain
2 1 1 0 SCOP 160113 YegP-like
2 2 1 2 SCOP 51690 Nicotinate/Quinolinate PRTase C-terminal domain-like
2 2 2 1 SCOP 81923 Double Clp-N motif
2 2 2 0 SCOP 47170 Aspartate receptor, ligand-binding domain
2 2 2 0 SCOP 54106 LysM domain
2 2 2 0 SCOP 52009 Phosphohistidine domain
2 2 1 1 SCOP 51344 Epsilon subunit of F1F0-ATP synthase N-terminal domain
2 1 1 0 SCOP 49265 Fibronectin type III
2 1 1 1 SCOP 48029 FliG
2 2 2 1 SCOP 56037 PheT/TilS domain
2 2 2 1 SCOP 57884 Ada DNA repair protein, N-terminal domain (N-Ada 10)
2 2 1 0 SCOP 140129 MxiH-like
2 2 2 2 SCOP 50621 Alanine racemase C-terminal domain-like
2 2 2 0 SCOP 52964 TolB, N-terminal domain
2 2 2 1 SCOP 54665 CO dehydrogenase molybdoprotein N-domain-like
2 2 1 0 SCOP 81891 Poly A polymerase C-terminal region-like
2 2 1 1 SCOP 101904 GyrA/ParC C-terminal domain-like
2 2 2 1 SCOP 46977 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
2 2 1 1 SCOP 100920 Heat shock protein 70kD (HSP70), peptide-binding domain
2 2 2 0 SCOP 46600 C-terminal UvrC-binding domain of UvrB
2 2 2 0 SCOP 110997 Sporulation related repeat
2 2 1 0 SCOP 90002 Hypothetical protein YjiA, C-terminal domain
2 2 1 0 SCOP 46604 Epsilon subunit of F1F0-ATP synthase C-terminal domain
2 2 1 0 SCOP 63418 MurE/MurF N-terminal domain
2 2 2 0 SCOP 110921 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
2 2 2 0 SCOP 47823 lambda integrase-like, N-terminal domain
2 2 2 0 SCOP 54423 DsbC/DsbG N-terminal domain-like
2 2 1 1 SCOP 63882 MoeA N-terminal region -like
2 2 2 0 SCOP 54768 dsRNA-binding domain-like
2 1 1 0 SCOP 47794 Rad51 N-terminal domain-like
2 2 2 0 SCOP 53155 Methylated DNA-protein cysteine methyltransferase domain
2 2 1 0 SCOP 75516 Pheromone-binding domain of LuxR-like quorum-sensing transcription factors
2 1 1 1 SCOP 56053 Ribosomal protein L6
2 2 1 1 SCOP 100934 Heat shock protein 70kD (HSP70), C-terminal subdomain
2 2 1 0 SCOP 55957 Phosphoglucomutase, C-terminal domain
2 2 2 0 SCOP 140591 Type III secretion system domain
2 2 1 1 SCOP 46557 GreA transcript cleavage protein, N-terminal domain
2 2 1 0 SCOP 54675 Nicotinate/Quinolinate PRTase N-terminal domain-like
2 2 1 0 SCOP 50615 N-terminal domain of alpha and beta subunits of F1 ATP synthase
2 2 1 0 SCOP 47757 Chemotaxis receptor methyltransferase CheR, N-terminal domain
2 1 1 0 SCOP 49493 HSP40/DnaJ peptide-binding domain
2 1 1 1 SCOP 54713 Elongation factor Ts (EF-Ts), dimerisation domain
2 2 1 1 SCOP 47917 C-terminal domain of alpha and beta subunits of F1 ATP synthase
2 2 2 0 SCOP 47005 Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
2 2 2 0 SCOP 101790 Aminomethyltransferase beta-barrel domain
2 2 1 0 SCOP 160996 HI0933 insert domain-like
1 1 1 1 SCOP 56731 DNA primase core
1 1 1 0 SCOP 55594 HPr-like
1 1 1 1 SCOP 74982 Small protein B (SmpB)
1 1 1 1 SCOP 56808 Ribosomal protein L1
1 1 1 1 SCOP 53178 Peptidyl-tRNA hydrolase-like
1 1 1 1 SCOP 47973 Ribosomal protein S7
1 1 1 0 SCOP 46911 Ribosomal protein S18
1 1 1 0 SCOP 81606 PP2C-like
1 1 1 1 SCOP 142433 CinA-like
1 1 1 1 SCOP 111331 NAD kinase/diacylglycerol kinase-like
1 1 1 1 SCOP 82607 YbaB-like
1 1 1 0 SCOP 89919 Ribosome-binding factor A, RbfA
1 1 1 1 SCOP 54999 Ribosomal protein S10
1 1 1 1 SCOP 52166 Ribosomal protein L4
1 1 1 0 SCOP 54189 Ribosomal proteins S24e, L23 and L15e
1 1 1 1 SCOP 54570 Ribosomal protein S19
1 1 1 1 SCOP 54843 Ribosomal protein L22
1 1 1 1 SCOP 54686 Ribosomal protein L16p/L10e
1 1 1 1 SCOP 50193 Ribosomal protein L14
1 1 1 1 SCOP 55282 RL5-like
1 1 1 1 SCOP 56047 Ribosomal protein S8
1 1 1 1 SCOP 52080 Ribosomal proteins L15p and L18e
1 1 1 0 SCOP 103491 Preprotein translocase SecY subunit
1 1 1 0 SCOP 57840 Ribosomal protein L36
1 1 1 1 SCOP 64263 Prokaryotic ribosomal protein L17
1 1 1 1 SCOP 64182 DHH phosphoesterases
1 1 1 0 SCOP 143034 L35p-like
1 1 1 1 SCOP 74731 Ribosomal protein L20
1 1 1 0 SCOP 56214 4'-phosphopantetheinyl transferase
1 1 1 1 SCOP 55831 Thymidylate synthase/dCMP hydroxymethylase
1 1 1 1 SCOP 141091 L21p-like
1 1 1 1 SCOP 110324 Ribosomal L27 protein-like
1 1 1 0 SCOP 47336 ACP-like
1 1 1 1 SCOP 53748 Phosphoglycerate kinase
1 1 1 1 SCOP 75625 YebC-like
1 1 1 1 SCOP 82649 SufE/NifU
1 1 1 1 SCOP 50324 Inorganic pyrophosphatase
1 1 1 0 SCOP 160369 Ribosomal protein L10-like
1 1 1 0 SCOP 46992 Ribosomal protein S20
1 1 1 1 SCOP 52943 ATP synthase (F1-ATPase), gamma subunit
1 1 1 0 SCOP 81333 F1F0 ATP synthase subunit C
1 1 1 1 SCOP 52161 Ribosomal protein L13
1 1 1 1 SCOP 47060 S15/NS1 RNA-binding domain
1 1 1 1 SCOP 51351 Triosephosphate isomerase (TIM)
1 1 1 1 SCOP 55194 Ribosome recycling factor, RRF
1 1 1 1 SCOP 54565 Ribosomal protein S16
1 1 1 1 SCOP 69765 IpsF-like
1 1 1 1 SCOP 64484 beta and beta-prime subunits of DNA dependent RNA-polymerase
1 1 1 1 SCOP 54611 SecB-like
1 1 1 1 SCOP 103263 Chorismate synthase, AroC
1 1 1 1 SCOP 111337 QueA-like
1 1 1 1 SCOP 51713 tRNA-guanine transglycosylase
1 1 1 1 SCOP 56770 HydA/Nqo6-like
1 1 1 1 SCOP 52313 Ribosomal protein S2
1 1 1 1 SCOP 64005 Undecaprenyl diphosphate synthase
1 1 1 1 SCOP 142695 RibA-like
1 1 1 1 SCOP 102705 NIF3 (NGG1p interacting factor 3)-like
1 1 1 0 SCOP 55229 Cell division protein MinE topological specificity domain
1 1 1 0 SCOP 140566 FlgN-like
1 1 1 0 SCOP 64307 SirA-like
1 1 1 1 SCOP 52121 Lumazine synthase
1 1 1 0 SCOP 117991 YbeD/HP0495-like
1 1 1 0 SCOP 55129 Ribosomal protein L30p/L7e
1 1 1 0 SCOP 46561 Ribosomal protein L29 (L29p)
1 1 1 0 SCOP 75169 DsrEFH-like
1 1 1 0 SCOP 111148 YggX-like
1 1 1 1 SCOP 54995 Ribosomal protein S6
1 1 1 0 SCOP 49764 HSP20-like chaperones
1 1 1 1 SCOP 55387 Frataxin/Nqo15-like
1 1 1 1 SCOP 56104 SAICAR synthase-like
1 1 1 0 SCOP 63829 Calcium-dependent phosphotriesterase
1 1 1 0 SCOP 47473 EF-hand
1 1 1 0 SCOP 110296 Oligoxyloglucan reducing end-specific cellobiohydrolase
1 1 1 1 SCOP 69500 DTD-like
1 1 1 0 SCOP 52799 (Phosphotyrosine protein) phosphatases II
1 1 1 1 SCOP 102886 Coproporphyrinogen III oxidase
1 1 1 0 SCOP 47027 Acyl-CoA binding protein
1 1 1 0 SCOP 55144 LigT-like
1 1 1 1 SCOP 55248 PCD-like
1 1 1 0 SCOP 47819 HRDC-like
1 1 1 1 SCOP 140959 Indolic compounds 2,3-dioxygenase-like
1 1 1 1 SCOP 54919 Nucleoside diphosphate kinase, NDK
1 1 1 0 SCOP 111126 Ligand-binding domain in the NO signalling and Golgi transport
1 1 1 1 SCOP 82282 Homocysteine S-methyltransferase
1 1 1 0 SCOP 55257 RBP11-like subunits of RNA polymerase
1 1 1 0 SCOP 64153 YjeF N-terminal domain-like
1 1 1 0 SCOP 58113 Apolipoprotein A-I
1 1 1 0 SCOP 52058 L domain-like
1 1 1 0 SCOP 63562 RPB6/omega subunit-like
1 1 1 1 SCOP 141734 HisI-like
1 1 1 0 SCOP 81648 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 0 SCOP 144091 Rhomboid-like
1 1 1 1 SCOP 55040 Molybdenum cofactor biosynthesis protein C, MoaC
1 1 1 1 SCOP 143243 Nqo5-like
1 1 1 0 SCOP 143422 Transposase IS200-like
1 1 1 0 SCOP 51717 Dihydropteroate synthetase-like
1 1 1 1 SCOP 52255 N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
1 1 1 1 SCOP 142754 NadA-like
1 1 1 1 SCOP 82697 PurS-like
1 1 1 0 SCOP 160246 EspE N-terminal domain-like
1 1 1 1 SCOP 55083 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
1 1 1 1 SCOP 89733 L-sulfolactate dehydrogenase-like
1 1 1 1 SCOP 64167 SurE-like
1 1 1 1 SCOP 63892 Pyridoxine 5'-phosphate synthase
1 1 1 0 SCOP 55154 CYTH-like phosphatases
1 1 1 0 SCOP 161111 Cation efflux protein transmembrane domain-like
1 1 1 1 SCOP 54690 Molybdopterin synthase subunit MoaE
1 1 1 0 SCOP 141000 Glu-tRNAGln amidotransferase C subunit
1 1 1 1 SCOP 56762 HydB/Nqo4-like
1 1 1 0 SCOP 116842 XseB-like
1 1 1 1 SCOP 111304 Recombination protein RecR
1 1 1 0 SCOP 50800 PK beta-barrel domain-like
1 1 1 0 SCOP 54786 YcfA/nrd intein domain
1 1 1 0 SCOP 49879 SMAD/FHA domain
1 1 1 0 SCOP 69047 Hypothetical protein YjbJ
1 1 1 1 SCOP 54111 Urease, gamma-subunit
1 1 1 1 SCOP 51278 Urease, beta-subunit
1 1 1 1 SCOP 52733 Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT)
1 1 1 0 SCOP 69065 RNase III domain-like
1 1 1 1 SCOP 55200 Translation initiation factor IF3, C-terminal domain
1 1 1 0 SCOP 50952 Soluble quinoprotein glucose dehydrogenase
1 1 1 0 SCOP 82153 FAS1 domain
1 1 1 0 SCOP 158997 Trm112p-like
1 1 1 0 SCOP 158442 DsbB-like
1 1 1 0 SCOP 102829 Cell division protein ZapA-like
1 1 1 1 SCOP 143456 VC0467-like
1 1 1 0 SCOP 144052 Thermophilic metalloprotease-like
1 1 1 0 SCOP 140804 YidB-like
1 1 1 1 SCOP 52425 Cryptochrome/photolyase, N-terminal domain
1 1 1 0 SCOP 50969 YVTN repeat-like/Quinoprotein amine dehydrogenase
1 1 1 0 SCOP 50998 Quinoprotein alcohol dehydrogenase-like
1 1 1 1 SCOP 89028 Cobalamin adenosyltransferase-like
1 1 1 0 SCOP 102400 DNA polymerase III chi subunit
1 1 1 0 SCOP 81330 Gated mechanosensitive channel
1 1 1 0 SCOP 109910 YgfY-like
1 1 1 0 SCOP 101307 YutG-like
1 1 1 0 SCOP 110087 DR1885-like metal-binding protein
1 1 1 0 SCOP 49472 Transthyretin (synonym: prealbumin)
1 1 1 1 SCOP 158694 UraD-Like
1 1 1 0 SCOP 102588 LmbE-like
1 1 1 1 SCOP 110069 ApaG-like
1 1 1 0 SCOP 159888 YdhG-like
1 1 1 1 SCOP 140478 LemA-like
1 1 1 0 SCOP 55804 Phoshotransferase/anion transport protein
1 1 1 1 SCOP 117457 FumA C-terminal domain-like
1 1 1 0 SCOP 111384 OmpH-like
1 1 1 1 SCOP 161070 SNF-like
1 1 1 0 SCOP 75138 HprK N-terminal domain-like
1 1 1 1 SCOP 56507 Methionine synthase activation domain-like
1 1 1 0 SCOP 101116 Flagellar export chaperone FliS
1 1 1 1 SCOP 52242 Cobalamin (vitamin B12)-binding domain
1 1 1 1 SCOP 110738 Glycerate kinase I
1 1 1 0 SCOP 53062 PTS system fructose IIA component-like
1 1 1 1 SCOP 111326 Urocanase
1 1 1 0 SCOP 75011 3-carboxy-cis,cis-mucoante lactonizing enzyme
1 1 1 1 SCOP 160950 YacF-like
1 1 1 1 SCOP 101738 SspB-like
1 1 1 0 SCOP 64076 MTH938-like
1 1 1 0 SCOP 140319 IscX-like
1 1 1 0 SCOP 89155 TorD-like
1 1 1 1 SCOP 159709 PhnH-like
1 1 1 1 SCOP 55846 N-acetylmuramoyl-L-alanine amidase-like
1 1 1 0 SCOP 75471 YhbY-like
1 1 1 0 SCOP 69754 Ribosome binding protein Y (YfiA homologue)
1 1 1 0 SCOP 74863 Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha)
1 1 1 0 SCOP 101498 Anti-sigma factor FlgM
1 1 1 0 SCOP 103039 CheC-like
1 1 1 1 SCOP 159238 SO1590-like
1 1 1 1 SCOP 56534 Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
1 1 1 0 SCOP 100939 SPOC domain-like
1 1 1 0 SCOP 49452 Starch-binding domain-like
1 1 1 1 SCOP 47175 Cytochromes
1 1 1 1 SCOP 158710 PSPTO4464-like
1 1 1 0 SCOP 89562 RraA-like
1 1 1 0 SCOP 52206 Hypothetical protein MTH538
1 1 1 1 SCOP 63592 Flagellar transcriptional activator FlhD
1 1 1 1 SCOP 160930 FlhC-like
1 1 1 1 SCOP 75708 Chemotaxis phosphatase CheZ
1 1 1 0 SCOP 53933 Microbial ribonucleases
1 1 1 0 SCOP 102198 Putative cyclase
1 1 1 1 SCOP 63992 Dipeptide transport protein
1 1 1 0 SCOP 52038 Barstar-related
1 1 1 1 SCOP 160920 PSTPO5379-like
1 1 1 1 SCOP 160519 BB2672-like
1 1 1 1 SCOP 52490 Tubulin nucleotide-binding domain-like
1 1 1 0 SCOP 101756 Hypothetical protein YgiW
1 1 1 0 SCOP 56563 Major capsid protein gp5
1 1 1 1 SCOP 69864 Argininosuccinate synthetase, C-terminal domain
1 1 1 1 SCOP 48024 N-terminal domain of DnaB helicase
1 1 1 1 SCOP 158832 Tex N-terminal region-like
1 1 1 1 SCOP 48592 GroEL equatorial domain-like
1 1 1 1 SCOP 69336 Alpha subunit of glutamate synthase, C-terminal domain
1 1 1 1 SCOP 56712 Prokaryotic type I DNA topoisomerase
1 1 1 1 SCOP 57938 DnaJ/Hsp40 cysteine-rich domain
1 1 1 1 SCOP 144064 Heme iron utilization protein-like
1 1 1 0 SCOP 141488 YdhA-like
1 1 1 0 SCOP 89872 Inhibitor of vertebrate lysozyme, Ivy
1 1 1 0 SCOP 82114 Riboflavin kinase-like
1 1 1 0 SCOP 46906 Ribosomal protein L11, C-terminal domain
1 1 1 0 SCOP 160443 SMR domain-like
1 1 1 0 SCOP 69304 Tricorn protease N-terminal domain
1 1 1 0 SCOP 82057 Prokaryotic SH3-related domain
1 1 1 1 SCOP 102645 CoaB-like
1 1 1 0 SCOP 118352 HSP33 redox switch-like
1 1 1 1 SCOP 56931 Outer membrane phospholipase A (OMPLA)
1 1 1 0 SCOP 81273 H-NS histone-like proteins
1 1 1 0 SCOP 159941 MM3350-like
1 1 1 1 SCOP 54821 Ribosomal protein S3 C-terminal domain
1 1 1 0 SCOP 81573 F1F0 ATP synthase subunit B, membrane domain
1 1 1 0 SCOP 63848 Cell-division inhibitor MinC, C-terminal domain
1 1 1 1 SCOP 140376 ChaB-like
1 1 1 0 SCOP 52935 PK C-terminal domain-like
1 1 1 0 SCOP 109635 DnaK suppressor protein DksA, alpha-hairpin domain
1 1 1 0 SCOP 81995 beta-sandwich domain of Sec23/24
1 1 1 1 SCOP 81935 N-terminal domain of bifunctional PutA protein
1 1 1 0 SCOP 118116 DNA mismatch repair protein MutL
1 1 1 1 SCOP 81336 F1F0 ATP synthase subunit A
1 1 1 1 SCOP 47789 C-terminal domain of RNA polymerase alpha subunit
1 1 1 0 SCOP 158560 BH3980-like
1 1 1 0 SCOP 48076 LigA subunit of an aromatic-ring-opening dioxygenase LigAB
1 1 1 0 SCOP 49464 Carboxypeptidase regulatory domain-like
1 1 1 0 SCOP 55658 L9 N-domain-like
1 1 1 0 SCOP 55816 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
1 1 1 1 SCOP 68923 PEP carboxykinase N-terminal domain
1 1 1 1 SCOP 82679 N-utilization substance G protein NusG, N-terminal domain
1 1 1 0 SCOP 56436 C-type lectin-like
1 1 1 0 SCOP 55190 Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
1 1 1 0 SCOP 49373 Invasin/intimin cell-adhesion fragments
1 1 1 1 SCOP 48334 DNA repair protein MutS, domain III
1 1 1 0 SCOP 58014 Coiled-coil domain of nucleotide exchange factor GrpE
1 1 1 0 SCOP 110814 TmoB-like
1 1 1 1 SCOP 55307 Tubulin C-terminal domain-like
1 1 1 1 SCOP 140990 FtsH protease domain-like
1 1 1 0 SCOP 51294 Hedgehog/intein (Hint) domain
1 1 1 1 SCOP 54719 Fe,Mn superoxide dismutase (SOD), C-terminal domain
1 1 1 0 SCOP 48163 An anticodon-binding domain of class I aminoacyl-tRNA synthetases
1 1 1 0 SCOP 110111 Ctag/Cox11
1 1 1 1 SCOP 140693 IpaD-like
1 1 1 1 SCOP 143968 UbiD C-terminal domain-like
1 1 1 1 SCOP 52021 Carbamoyl phosphate synthetase, small subunit N-terminal domain
1 1 1 0 SCOP 54791 Eukaryotic type KH-domain (KH-domain type I)
1 1 1 1 SCOP 52029 GroEL apical domain-like
1 1 1 0 SCOP 55060 GHMP Kinase, C-terminal domain
1 1 1 0 SCOP 116927 EspA/CesA-like
1 1 1 0 SCOP 68912 Rho N-terminal domain-like
1 1 1 1 SCOP 54810 GMP synthetase C-terminal dimerisation domain
1 1 1 0 SCOP 57863 ArfGap/RecO-like zinc finger
1 1 1 1 SCOP 143548 Serine metabolism enzymes domain
1 1 1 0 SCOP 52279 Beta-D-glucan exohydrolase, C-terminal domain
1 1 1 0 SCOP 47364 Domain of the SRP/SRP receptor G-proteins
1 1 1 0 SCOP 48300 Ribosomal protein L7/12, oligomerisation (N-terminal) domain
1 1 1 0 SCOP 63737 Leukotriene A4 hydrolase N-terminal domain
1 1 1 1 SCOP 55447 CO dehydrogenase flavoprotein C-terminal domain-like
1 1 1 0 SCOP 49354 PapD-like
1 1 1 0 SCOP 47144 HSC20 (HSCB), C-terminal oligomerisation domain
1 1 1 0 SCOP 46934 UBA-like
1 1 1 0 SCOP 160240 Cation efflux protein cytoplasmic domain-like
1 1 1 1 SCOP 56327 LDH C-terminal domain-like
1 1 1 0 SCOP 100879 Lesion bypass DNA polymerase (Y-family), little finger domain
1 1 1 0 SCOP 69075 Glutamyl tRNA-reductase dimerization domain
1 1 1 0 SCOP 55945 TATA-box binding protein-like
1 1 1 0 SCOP 52113 BRCT domain
1 1 1 1 SCOP 141259 CarD-like
1 1 1 0 SCOP 47831 Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
1 1 1 0 SCOP 74942 YhbC-like, C-terminal domain
1 1 1 0 SCOP 89069 N-terminal, cytoplasmic domain of anti-sigmaE factor RseA
1 1 1 0 SCOP 48435 Bacterial muramidases
1 1 1 0 SCOP 52413 UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
1 1 1 0 SCOP 75420 YhbC-like, N-terminal domain
1 1 1 1 SCOP 81624 N-terminal domain of MutM-like DNA repair proteins
1 1 1 0 SCOP 54752 RecA protein, C-terminal domain
1 1 1 0 SCOP 54782 Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
1 1 1 0 SCOP 102735 Trigger factor ribosome-binding domain
1 1 1 0 SCOP 54680 Pyrimidine nucleoside phosphorylase C-terminal domain
1 1 1 0 SCOP 55904 Ornithine decarboxylase C-terminal domain
1 1 1 0 SCOP 47807 5' to 3' exonuclease, C-terminal subdomain
1 1 1 1 SCOP 47446 Signal peptide-binding domain
1 1 1 1 SCOP 64397 Hsp33 domain
1 1 1 0 SCOP 54991 Anticodon-binding domain of PheRS
1 1 1 0 SCOP 141986 LD-carboxypeptidase A C-terminal domain-like
1 1 1 1 SCOP 55271 DNA repair protein MutS, domain I
1 1 1 0 SCOP 55048 Probable ACP-binding domain of malonyl-CoA ACP transacylase
1 1 1 0 SCOP 69287 Urease metallochaperone UreE, N-terminal domain
1 1 1 0 SCOP 47928 N-terminal domain of the delta subunit of the F1F0-ATP synthase
1 1 1 1 SCOP 48108 Carbamoyl phosphate synthetase, large subunit connection domain
1 1 1 1 SCOP 82051 Obg GTP-binding protein N-terminal domain
1 1 1 0 SCOP 143724 PHP14-like
1 1 1 1 SCOP 54368 Glutamine synthetase, N-terminal domain
1 1 1 1 SCOP 55261 GAD domain-like
1 1 1 0 SCOP 51269 AFP III-like domain
1 1 1 1 SCOP 110942 HSP90 C-terminal domain
1 1 1 1 SCOP 51649 RuBisCo, C-terminal domain
1 1 1 0 SCOP 54966 RuBisCO, large subunit, small (N-terminal) domain
1 1 1 1 SCOP 54747 Ribosomal L11/L12e N-terminal domain
1 1 1 1 SCOP 46609 Fe,Mn superoxide dismutase (SOD), N-terminal domain
1 1 1 0 SCOP 161234 E7 C-terminal domain-like
1 1 1 0 SCOP 69742 Glutamyl tRNA-reductase catalytic, N-terminal domain
1 1 1 0 SCOP 75553 Smc hinge domain
1 1 1 1 SCOP 159800 PrpR receptor domain-like
1 1 1 0 SCOP 48168 R1 subunit of ribonucleotide reductase, N-terminal domain
1 1 1 1 SCOP 81886 Helical scaffold and wing domains of SecA
1 1 1 0 SCOP 54849 GroEL-intermediate domain like
1 1 1 1 SCOP 56194 Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
1 1 1 0 SCOP 52156 Initiation factor IF2/eIF5b, domain 3
1 1 1 0 SCOP 116878 TrmE connector domain
1 1 1 0 SCOP 51064 Head domain of nucleotide exchange factor GrpE
1 1 1 0 SCOP 55653 Ribosomal protein L9 C-domain
1 1 1 1 SCOP 75445 D-ribose-5-phosphate isomerase (RpiA), lid domain
1 1 1 1 SCOP 143517 TRCF domain-like
1 1 1 1 SCOP 101353 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
1 1 1 1 SCOP 56553 Insert subdomain of RNA polymerase alpha subunit
1 1 1 1 SCOP 74778 Aconitase B, N-terminal domain
1 1 1 0 SCOP 64383 Cell-division protein ZipA, C-terminal domain
1 1 1 1 SCOP 63433 Fumarylacetoacetate hydrolase, FAH, N-terminal domain
1 1 1 1 SCOP 47644 Methionine synthase domain
1 1 1 0 SCOP 46929 DNA helicase RuvA subunit, C-terminal domain
1 1 1 0 SCOP 160467 PH0987 N-terminal domain-like
1 1 1 0 SCOP 54364 Translation initiation factor IF3, N-terminal domain
1 1 1 0 SCOP 69705 Transcription factor NusA, N-terminal domain
1 1 1 0 SCOP 53150 DNA repair protein MutS, domain II
1 1 1 1 SCOP 81767 Pre-protein crosslinking domain of SecA
1 1 1 0 SCOP 140356 PPK N-terminal domain-like
1 1 1 0 SCOP 47802 DNA polymerase beta, N-terminal domain-like
1 1 1 0 SCOP 81799 Putative methyltransferase TM0872, insert domain
1 1 1 0 SCOP 69737 Urease metallochaperone UreE, C-terminal domain
1 1 1 0 SCOP 82829 MesJ substrate recognition domain-like
1 1 1 0 SCOP 55052 CheY-binding domain of CheA
1 1 1 0 SCOP 46915 Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
1 1 1 0 SCOP 109736 FGAM synthase PurL, linker domain
1 1 1 0 SCOP 57770 Methionyl-tRNA synthetase (MetRS), Zn-domain

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The following superfamilies have one or more weak hits:

SCOP superfamily Myosin rod fragments
SCOP superfamily Positive stranded ssRNA viruses
SCOP superfamily Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
SCOP superfamily Bacterial photosystem II reaction centre, L and M subunits
SCOP superfamily Family A G protein-coupled receptor-like
SCOP superfamily Membrane penetration protein mu1
SCOP superfamily DsrC, the gamma subunit of dissimilatory sulfite reductase
SCOP superfamily Integrin beta tail domain
SCOP superfamily Cloacin translocation domain
SCOP superfamily Integrin alpha N-terminal domain
SCOP superfamily Arp2/3 complex 21 kDa subunit ARPC3
SCOP superfamily Head-to-tail joining protein W, gpW
SCOP superfamily Bacterial hemolysins
SCOP superfamily Tropomyosin
SCOP superfamily Leucine zipper domain
SCOP superfamily FYVE/PHD zinc finger
SCOP superfamily Cysteine-rich domain
SCOP superfamily Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain
SCOP superfamily Aerolisin/ETX pore-forming domain
SCOP superfamily Bcl-2 inhibitors of programmed cell death
SCOP superfamily Prim-pol domain
SCOP superfamily SCP-like
SCOP superfamily Probable bacterial effector-binding domain
SCOP superfamily Chitinase insertion domain
SCOP superfamily B12-dependent dehydatase associated subunit
SCOP superfamily Toll/Interleukin receptor TIR domain
SCOP superfamily PA domain
SCOP superfamily WD40 repeat-like
SCOP superfamily Sialidases
SCOP superfamily Ricin B-like lectins
SCOP superfamily Cytokine
SCOP superfamily Soluble secreted chemokine inhibitor, VCCI
SCOP superfamily TRAF domain-like
SCOP superfamily Cna protein B-type domain
SCOP superfamily Superoxide reductase-like
SCOP superfamily beta-Galactosidase/glucuronidase domain
SCOP superfamily Multiheme cytochromes
SCOP superfamily ARM repeat
SCOP superfamily Apolipophorin-III
SCOP superfamily Cytochrome c oxidase subunit h
SCOP superfamily Mitochondrial import receptor subunit Tom20
SCOP superfamily HMG-box
SCOP superfamily T4 endonuclease V
SCOP superfamily Spectrin repeat
SCOP superfamily PspA lactotransferrin-binding region
SCOP superfamily CHY zinc finger-like
SCOP superfamily YfgJ-like
SCOP superfamily AF1531-like
SCOP superfamily MalF N-terminal region-like
SCOP superfamily Jann2411-like
SCOP superfamily V-type ATPase subunit E-like
SCOP superfamily BRK domain-like
SCOP superfamily YgaC/TfoX-N like
SCOP superfamily EreA/ChaN-like
SCOP superfamily AttH-like
SCOP superfamily Lipase chaperone-like
SCOP superfamily LanC-like
SCOP superfamily HP0062-like
SCOP superfamily NOB1 zinc finger-like
SCOP superfamily NAP-like
SCOP superfamily RelE-like
SCOP superfamily Fic-like
SCOP superfamily EsxAB dimer-like
SCOP superfamily CbiD-like
SCOP superfamily Hypothetical protein SAV1430
SCOP superfamily ThiG-like
SCOP superfamily Virulence-associated V antigen
SCOP superfamily NinB
SCOP superfamily General secretion pathway protein M, EpsM
SCOP superfamily Alpha-2,3/8-sialyltransferase CstII
SCOP superfamily F420-dependent methylenetetrahydromethanopterin dehydrogenase (MTD)
SCOP superfamily DNA-binding pseudobarrel domain
SCOP superfamily NHL repeat
SCOP superfamily ADP-ribosylglycohydrolase
SCOP superfamily Formin homology 2 domain (FH2 domain)
SCOP superfamily Invasion protein A (SipA) , C-terminal actin binding domain
SCOP superfamily Methenyltetrahydrofolate cyclohydrolase-like
SCOP superfamily Docking domain A of the erythromycin polyketide synthase (DEBS)

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