SUPERFAMILY 1.75 HMM library and genome assignments server

Domain assignment for ENSCJAP00000017339 from Callithrix jacchus 76_3.2.1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSCJAP00000017339
Domain Number 1 Region: 277-469
Classification Level Classification E-value
Superfamily Hemopexin-like domain 9.03e-66
Family Hemopexin-like domain 1.16e-06
Further Details:      
 
Domain Number 2 Region: 101-265
Classification Level Classification E-value
Superfamily Metalloproteases ("zincins"), catalytic domain 7.11e-57
Family Matrix metalloproteases, catalytic domain 3.59e-07
Further Details:      
 
Domain Number 3 Region: 22-97
Classification Level Classification E-value
Superfamily PGBD-like 8.48e-19
Family MMP N-terminal domain 0.00076
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
metallopeptidase activity 1.957 173.75
endopeptidase activity 1.54 149.12
zinc ion binding 1.659 43.58
integrin binding 1.753 17.75
cytokine receptor binding 2.035 15.08
growth factor receptor binding 1.997 15.08
enzyme activator activity 1.401 14.47
amide binding 1.711 13.09
collagen binding 1.838 10.43
protein complex binding 1.491 8.07
Cellular Component IC (bits) H-Score
brush border 1.48 22.54
Golgi lumen 2.239 12.24
secretory granule 1.826 10.6
neuron projection terminus 2.106 10.52
lysosomal membrane 1.998 8.25
trans-Golgi network 1.797 7.99
coated vesicle 1.74 7.78
clathrin-coated vesicle 1.876 7.78
lytic vacuole 1.57 7.42
vacuolar part 1.621 7.11

Protein sequence

External link(s) Protein: ENSCJAP00000017339   Gene: ENSCJAG00000009452   Transcript: ENSCJAT00000018341
Sequence length 469
Comment pep:known_by_projection chromosome:C_jacchus3.2.1:11:538535:550540:-1 gene:ENSCJAG00000009452 transcript:ENSCJAT00000018341 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MKFLLLLLLQATASGALPLNSSTSLEKDNELFGERYLEKFYGLEKNKLPVTKMKAVRTLL
EEKIQEMQHFLGLNVTGRLDTSTLEMMHTPRCGVPDVHHFTTMAGRPVWKKHYITYSIQN
YTPDMNRKDVDYVIQKAFQVWSHVTPLKFSKTNAGVADIVMFFASGAHGDYNAFDGRGGV
IAHAFGPGYGIGGDTHFDEDEFWTINSKGTNLFLVAVHEIGHALGLDHSSDPNAIMFPTY
KYVDVSTFRLSADDIRGIQSLYGRPKEYQPLPKPDNSKPAPCDPNLSFDAVTTMGDKIFF
FKDRFLLTTSPQRPKASVSLISSLWPTLPSSIEAAYEIEARNQVFLFKDDRYWLISNLRP
QPNYPKSIRSFGFPNFVKKIDAAVYNPRLHKTYFFIDNQYWRYDERRQSMDPGYPKLITK
NFPVTGHKIDAVFSKNRYYYFFQGANQFEYDFLSQRVTKRLKHNSWFGC
Download sequence
Identical sequences F7IH65
ENSCJAP00000017339 ENSCJAP00000017339

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