SUPERFAMILY 1.75 HMM library and genome assignments server

Domain assignment for ENSAMEP00000017353 from Ailuropoda melanoleuca 76_1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSAMEP00000017353
Domain Number 1 Region: 21-88
Classification Level Classification E-value
Superfamily PGBD-like 3.77e-21
Family MMP N-terminal domain 6.71e-05
Further Details:      
 
Domain Number 2 Region: 92-154
Classification Level Classification E-value
Superfamily Metalloproteases ("zincins"), catalytic domain 2.36e-16
Family Matrix metalloproteases, catalytic domain 2.83e-05
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
metallopeptidase activity 1.956 173.69
endopeptidase activity 1.539 149.07
zinc ion binding 1.658 43.61
integrin binding 1.752 17.74
cytokine receptor binding 2.034 15.08
growth factor receptor binding 1.996 15.08
enzyme activator activity 1.402 14.46
amide binding 1.71 13.19
collagen binding 1.837 10.43
protein complex binding 1.49 8.1
Cellular Component IC (bits) H-Score
brush border 1.481 22.53
secretory granule 1.827 10.56
neuron projection terminus 2.132 9.5
lysosomal membrane 2.005 8.2
trans-Golgi network 1.798 8.02
coated vesicle 1.745 7.82
clathrin-coated vesicle 1.877 7.82
dendrite 1.548 7.12
synapse part 1.513 5.74
nucleoplasm part 1.418 5.58

Protein sequence

External link(s) Protein: ENSAMEP00000017353   Gene: ENSAMEG00000016417   Transcript: ENSAMET00000018063
Sequence length 155
Comment pep:known_by_projection scaffold:ailMel1:GL192338.1:1985608:1987594:1 gene:ENSAMEG00000016417 transcript:ENSAMET00000018063 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
WILETSAVFTSFSPILAQGLTHSGSQKIFVEQQYLNTFYGCPKESCNLFVLKDALKKMQK
FFGLPQTGELDQSTIETMRKPRCGNPDVANYNFFPRKPKWDKNQITYRIIGYTPDLDPET
VDDAFARAFQVWSDVTPLRFSRIHDGEADIMINFG
Download sequence
Identical sequences G1MDC5
ENSAMEP00000017353

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