SUPERFAMILY 1.75 HMM library and genome assignments server

Domain assignment for ENSAMEP00000017353 from Ailuropoda melanoleuca 76_1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSAMEP00000017353
Domain Number 1 Region: 21-88
Classification Level Classification E-value
Superfamily PGBD-like 3.77e-21
Family MMP N-terminal domain 0.0000671
Further Details:      
 
Domain Number 2 Region: 92-154
Classification Level Classification E-value
Superfamily Metalloproteases ("zincins"), catalytic domain 2.36e-16
Family Matrix metalloproteases, catalytic domain 0.0000283
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
endopeptidase activity 1.536 148.91
metalloendopeptidase activity 2.043 148.91
zinc ion binding 1.65 43.49
integrin binding 1.779 17.72
growth factor receptor binding 1.998 15.09
cytokine receptor binding 2.036 15.09
enzyme activator activity 1.376 14.48
amide binding 1.716 13.08
cell adhesion molecule binding 1.514 11.59
collagen binding 1.844 5.54
Cellular Component IC (bits) H-Score
brush border 1.477 22.56
secretory granule 1.818 10.6
neuron projection terminus 2.132 10.38
lysosomal membrane 1.986 8.14
trans-Golgi network 1.793 7.96
lytic vacuole 1.571 7.43
vacuolar part 1.621 7.24
dendrite 1.585 7.21
transferase complex 1.423 5.58
nucleoplasm part 1.496 5.58

Protein sequence

External link(s) Protein: ENSAMEP00000017353   Gene: ENSAMEG00000016417   Transcript: ENSAMET00000018063
Sequence length 155
Comment pep:known_by_projection scaffold:ailMel1:GL192338.1:1985608:1987594:1 gene:ENSAMEG00000016417 transcript:ENSAMET00000018063 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
WILETSAVFTSFSPILAQGLTHSGSQKIFVEQQYLNTFYGCPKESCNLFVLKDALKKMQK
FFGLPQTGELDQSTIETMRKPRCGNPDVANYNFFPRKPKWDKNQITYRIIGYTPDLDPET
VDDAFARAFQVWSDVTPLRFSRIHDGEADIMINFG
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Identical sequences G1MDC5
ENSAMEP00000017353

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