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Domain assignment for PITA_000086163-RA from Pinus taeda

Domain architecture


Domain assignment details

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Strong hits

Sequence:  PITA_000086163-RA
Domain Number 1 Region: 208-421,454-485
Classification Level Classification E-value
Superfamily Phospholipase D/nuclease 3.45e-29
Family Nuclease 0.05
Further Details:      
 
Domain Number 2 Region: 552-661,709-808
Classification Level Classification E-value
Superfamily Phospholipase D/nuclease 3.73e-26
Family Nuclease 0.074
Further Details:      
 
Domain Number 3 Region: 88-196
Classification Level Classification E-value
Superfamily C2 domain (Calcium/lipid-binding domain, CaLB) 2.38e-17
Family PLC-like (P variant) 0.074
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) PITA_000086163-RA
Sequence length 879
Comment protein AED:0.02 eAED:0.02 QI:0|1|0.5|1|1|1|2|205|879
Sequence
MAQQVLHGTMDVTICEADSVNDTPRGVIGSTPMIFRKVNETIISNSNSCSALHPNLEFTI
VFVYVMCTQMINSAQAAVGVGGGGGFGFGSGKGWSDLYATIDLERARVGRTRVLVQNSMN
PKWNESFHIYCAHVASNVVVSVKSDNAIGATLIGRAKVPALDILQGRLIDRWVPLCNENG
HALRGGARVHVKLQFWRIIPSLLSLTPEFEGVPYTFFKQSKGCRVTLYHDAHVPASFNPT
LGPQVYRQHRYWEDLFDCISKAKHLVYITGWSVYTGIRLIRDPAQYRKSGGELQRQSTLG
ELLKRKANEGVSVLLLVWDDRTSNSFVRKKGVMATHDQETYDYFANTKVRCRLCPRNPDD
GMSLVQGITTDTMFTHHQKTVVVDVDPVPSNSNSNSWERRRPIVAFVGGIDLCDGRYDTP
SHSLFRTLQHGSEHSDDFHQPNFPGACIDKGGPREPWHDIHSKLEGPVAWDVLSNFEQRW
KKQGEANQNVLEGSEKEKYICPPTPVTSENDVESWNVQVFRSIDGGAAFGFPEKPEEAAK
AGLVSGKGVIVDRSIQDAYINAIRRANNFIYIENQYFLGSSFCWKPDGPHMDLADIGALH
LIPKELSLKIVSKIQAGERFSVYIVVPMWPEGIPDSASVQAILHWQRKTMEMMYLDIACA
LRAKQMDDVNPRDYLTFFCLANREKKLGGEYVPPQSPDDDDTYYRRAQNKRRFMIYVHSK
MMIVDDEYIIVGSANINQRSMDGGRDSEIAMGAYQPHYLGTAGKAARGQIGTAGKAARGQ
IHCFRMSLWYEHMGMLDKLFLQPQTLDCIRKVNAIAQKTWESYASEELYEDLPAHLLTYP
VLVTNDGNVGELPAFPNFPDTTAPVLGRPSERLPPILTT
Download sequence
Identical sequences PITA_000086163-RA

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