SUPERFAMILY 1.75 HMM library and genome assignments server

Domain assignment for ENSBTAP00000006029 from Bos taurus 76_3.1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSBTAP00000006029
Domain Number 1 Region: 97-262
Classification Level Classification E-value
Superfamily Metalloproteases ("zincins"), catalytic domain 5.68e-57
Family Matrix metalloproteases, catalytic domain 4.13e-07
Further Details:      
 
Domain Number 2 Region: 25-92
Classification Level Classification E-value
Superfamily PGBD-like 5.69e-16
Family MMP N-terminal domain 0.002
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
metallopeptidase activity 1.956 173.69
endopeptidase activity 1.539 149.07
zinc ion binding 1.658 43.61
integrin binding 1.752 17.74
cytokine receptor binding 2.034 15.08
growth factor receptor binding 1.996 15.08
enzyme activator activity 1.402 14.46
amide binding 1.71 13.19
collagen binding 1.837 10.43
protein complex binding 1.49 8.1
Cellular Component IC (bits) H-Score
brush border 1.481 22.53
secretory granule 1.827 10.56
neuron projection terminus 2.132 9.5
lysosomal membrane 2.005 8.2
trans-Golgi network 1.798 8.02
coated vesicle 1.745 7.82
clathrin-coated vesicle 1.877 7.82
dendrite 1.548 7.12
synapse part 1.513 5.74
nucleoplasm part 1.418 5.58

Protein sequence

External link(s) Protein: ENSBTAP00000006029   Gene: ENSBTAG00000004594   Transcript: ENSBTAT00000006029
Sequence length 267
Comment pep:known chromosome:UMD3.1:15:6390160:6400322:1 gene:ENSBTAG00000004594 transcript:ENSBTAT00000006029 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MRLVLLCAACLLPGSPALPLGPGPGGEGDPRWQLAQDYLKRFYSSDSKIKNANSLEVRLK
RMEGFFHLPITGILSPRIIEIMEKPRCGVPDVAEFSLFPNHPKWTSKVVTYRIMSYTSDL
PHITVNQLVAKAFKIWSEAIPLTFKRLRWGTADIMIGFARRAHGDPYPFDGPGATLAHAF
APGPGLGGDAHFDEDERWTDGIGIGVNFLYVATHELGHSLGLSHSSDPNAVMYPTYSKED
SKNFKLSQDDINGIQLLYGKRNDSRKK
Download sequence
Identical sequences F1MU56
ENSBTAP00000006029 ENSBTAP00000006029 9913.ENSBTAP00000006029

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