SUPERFAMILY 1.75 HMM library and genome assignments server

Domain assignment for ENSBTAP00000006029 from Bos taurus 76_3.1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSBTAP00000006029
Domain Number 1 Region: 97-262
Classification Level Classification E-value
Superfamily Metalloproteases ("zincins"), catalytic domain 5.68e-57
Family Matrix metalloproteases, catalytic domain 0.000000413
Further Details:      
 
Domain Number 2 Region: 25-92
Classification Level Classification E-value
Superfamily PGBD-like 5.69e-16
Family MMP N-terminal domain 0.002
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
endopeptidase activity 1.536 148.91
metalloendopeptidase activity 2.043 148.91
zinc ion binding 1.65 43.49
integrin binding 1.779 17.72
growth factor receptor binding 1.998 15.09
cytokine receptor binding 2.036 15.09
enzyme activator activity 1.376 14.48
amide binding 1.716 13.08
cell adhesion molecule binding 1.514 11.59
collagen binding 1.844 5.54
Cellular Component IC (bits) H-Score
brush border 1.477 22.56
secretory granule 1.818 10.6
neuron projection terminus 2.132 10.38
lysosomal membrane 1.986 8.14
trans-Golgi network 1.793 7.96
lytic vacuole 1.571 7.43
vacuolar part 1.621 7.24
dendrite 1.585 7.21
transferase complex 1.423 5.58
nucleoplasm part 1.496 5.58

Protein sequence

External link(s) Protein: ENSBTAP00000006029   Gene: ENSBTAG00000004594   Transcript: ENSBTAT00000006029
Sequence length 267
Comment pep:known chromosome:UMD3.1:15:6390160:6400322:1 gene:ENSBTAG00000004594 transcript:ENSBTAT00000006029 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MRLVLLCAACLLPGSPALPLGPGPGGEGDPRWQLAQDYLKRFYSSDSKIKNANSLEVRLK
RMEGFFHLPITGILSPRIIEIMEKPRCGVPDVAEFSLFPNHPKWTSKVVTYRIMSYTSDL
PHITVNQLVAKAFKIWSEAIPLTFKRLRWGTADIMIGFARRAHGDPYPFDGPGATLAHAF
APGPGLGGDAHFDEDERWTDGIGIGVNFLYVATHELGHSLGLSHSSDPNAVMYPTYSKED
SKNFKLSQDDINGIQLLYGKRNDSRKK
Download sequence
Identical sequences F1MU56
9913.ENSBTAP00000006029 ENSBTAP00000006029 ENSBTAP00000006029

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