SUPERFAMILY 1.75 HMM library and genome assignments server

Domain assignment for ENSBTAP00000021843 from Bos taurus 76_3.1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSBTAP00000021843
Domain Number 1 Region: 335-530
Classification Level Classification E-value
Superfamily Hemopexin-like domain 2.88e-55
Family Hemopexin-like domain 0.0000167
Further Details:      
 
Domain Number 2 Region: 77-296
Classification Level Classification E-value
Superfamily Metalloproteases ("zincins"), catalytic domain 1.75e-48
Family Matrix metalloproteases, catalytic domain 0.0000192
Further Details:      
 
Domain Number 3 Region: 37-112
Classification Level Classification E-value
Superfamily PGBD-like 6.75e-19
Family MMP N-terminal domain 0.003
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
brush border 1.477 22.56
Golgi lumen 2.24 12.25
secretory granule 1.818 10.6
neuron projection terminus 2.132 10.38
lysosomal membrane 1.986 8.14
trans-Golgi network 1.793 7.96
lytic vacuole 1.571 7.43
vacuolar part 1.621 7.24
dendrite 1.585 7.21
transferase complex 1.423 5.58
Molecular Function IC (bits) H-Score
endopeptidase activity 1.536 148.91
metalloendopeptidase activity 2.043 148.91
zinc ion binding 1.65 43.49
integrin binding 1.779 17.72
growth factor receptor binding 1.998 15.09
cytokine receptor binding 2.036 15.09
enzyme activator activity 1.376 14.48
amide binding 1.716 13.08
cell adhesion molecule binding 1.514 11.59
collagen binding 1.844 5.54

Protein sequence

External link(s) Protein: ENSBTAP00000021843   Gene: ENSBTAG00000016424   Transcript: ENSBTAT00000021843
Sequence length 582
Comment pep:known_by_projection chromosome:UMD3.1:25:2478689:2488857:1 gene:ENSBTAG00000016424 transcript:ENSBTAT00000021843 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
RRPRARGSPSSPSPPRPRPAPPGLLALLLPLLQPPARAREPSAQDVSLGVDWLTRYGYLP
PPHPAQAQLQSPAKLRDAIKVMQRFAGLPETGVLDPLTVATMHKPRCSLPDVLGAAGLVR
RRRRYALSGSVWKKRTLTWRVNSFPQGSGLSQETVRTLMHHALTTWGAESDLRFQEVGSQ
GPTEPDILIDFARAYHQDSYPFDGQGGTLAHAFFPGEHPISGDTHFDDEETWTFGSKDGE
GTDLFAVAVHEFGHALGLGHSSAPDSIMRPFYQGPVGNPAEYRLSQDDREGLQQLYGTAG
GRAPQTPYDKPTRKPLAPPPPPPALPPDSTPQPLPDRCDGNFDAIANIRGETFFFKGPWF
WRLQPSGQLVSPRPARLHRFWEGLPTQVKVIQAAYARHPDGRILLFSGPQFWSFQDRLLE
GAARPLTELGLPPGTEVDAVFSWPLNGKTYLIRGRQYWRYDEAAARPDPGYPRDLSLWEG
APSAPDDVTVSNTGDTYFFKGLHYWRFPKGSIKAEPDSPQPMGPKFLDCPAPTVGPRAPR
PPRATLKAGDCDCQCGISRAAGRPSVLLLPLLSLLVGGLASP
Download sequence
Identical sequences F1N1F5
ENSBTAP00000021843 ENSBTAP00000021843

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