SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|297560455|ref|YP_003679429.1| from Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|297560455|ref|YP_003679429.1|
Domain Number 1 Region: 199-372
Classification Level Classification E-value
Superfamily Trypsin-like serine proteases 5.51e-30
Family Prokaryotic proteases 0.0000457
Further Details:      
 
Weak hits

Sequence:  gi|297560455|ref|YP_003679429.1|
Domain Number - Region: 138-182
Classification Level Classification E-value
Superfamily Alpha-lytic protease prodomain 0.000654
Family Alpha-lytic protease prodomain 0.0023
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|297560455|ref|YP_003679429.1|
Sequence length 381
Comment peptidase S1 and S6 chymotrypsin/Hap [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111]
Sequence
MRPSPAISAIGTGALAFGLAFSVTPGASAATVPAEPASEAQTMMEALQRDLGLTPLGAEE
LLSAQEEAIETDAEATEAAGASYGGSLFDTETLQLTVLVTDASAVEAVEATGAEATVVSH
GTEGLAEVVDALDETGGREGVVGWYPDVESDTVVVQVAEGASADGLIEAAGVDPSAVRVE
ETSETPRLYADIVGGEAYYMGGGRCSVGFAVTDGSGAGGFVTAGHCGTVGTGAESSDGSG
SGTFQESVFPGSDGAFVAATSNWNVTNLVSRYDSGSPQAVSGSSQAPEGSAVCRSGSTTG
WHCGTIEARGQTVSYPQGTVQDLTRTDVCAEPGDSGGSFIAGSQAQGVTSGGSGNCTSGG
TTYYQEVTPLLSSWGLSLVTG
Download sequence
Identical sequences D7B3J5
gi|297560455|ref|YP_003679429.1| WP_013152530.1.70090 WP_013152530.1.87825

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]