SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|297564231|ref|YP_003683204.1| from Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|297564231|ref|YP_003683204.1|
Domain Number 1 Region: 197-373
Classification Level Classification E-value
Superfamily Trypsin-like serine proteases 6.53e-33
Family Prokaryotic proteases 0.0031
Further Details:      
 
Weak hits

Sequence:  gi|297564231|ref|YP_003683204.1|
Domain Number - Region: 15-92
Classification Level Classification E-value
Superfamily ABC transporter transmembrane region 0.0687
Family ABC transporter transmembrane region 0.027
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|297564231|ref|YP_003683204.1|
Sequence length 392
Comment peptidase S1 and S6 chymotrypsin/Hap [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111]
Sequence
MLDVILVVLLLLFAVTGYRQGFIVGVFSFAGFVGGGVLAALTAPAPIQAWVEDPGRQALL
AIAVVFLSAALGQFLLSYLGTFVRNKVTWDSARVLDAIGGALISGLSVLLVAWFIGSTVA
NSALPFVAGQVRDSRILHSVDTLMPEAAHSGFSTFRRIVDQSAFPQVFSGLGTGELAEVA
PPDPDVLTTPELIESSRSVVKVLGTAPSCQRRVEGTGFAYAEDRIMTNAHVVAGVTDDLR
VVTREGYQLDATLVLFDAQQDLAVLHVPGLDLEPLEFTYEAPQGGDAVVAGFPRNSGFTA
VPARVRARQTAQGPDFYHSQQVSREIYQVRAVVRPGNSGGPLLSPDGTVYGVVFAAATNE
PETGYVLTADEVAENAQSGLENDEQVSSQACD
Download sequence
Identical sequences D7B940
WP_013156305.1.70090 WP_013156305.1.87825 gi|297564231|ref|YP_003683204.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]