SUPERFAMILY 1.75 HMM library and genome assignments server

Domain assignment for ENSSTOP00000007704 from Ictidomys tridecemlineatus 76_2

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSSTOP00000007704
Domain Number 1 Region: 287-479
Classification Level Classification E-value
Superfamily Hemopexin-like domain 1.7e-63
Family Hemopexin-like domain 3.39e-06
Further Details:      
 
Domain Number 2 Region: 110-274
Classification Level Classification E-value
Superfamily Metalloproteases ("zincins"), catalytic domain 7.1e-56
Family Matrix metalloproteases, catalytic domain 1e-06
Further Details:      
 
Domain Number 3 Region: 38-105
Classification Level Classification E-value
Superfamily PGBD-like 1.51e-19
Family MMP N-terminal domain 0.0009
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
metallopeptidase activity 1.956 173.69
endopeptidase activity 1.539 149.07
zinc ion binding 1.658 43.61
integrin binding 1.752 17.74
growth factor receptor binding 1.996 15.08
cytokine receptor binding 2.034 15.08
enzyme activator activity 1.402 14.46
amide binding 1.71 13.19
collagen binding 1.837 10.43
protein complex binding 1.49 8.1
Cellular Component IC (bits) H-Score
brush border 1.481 22.53
Golgi lumen 2.24 12.28
secretory granule 1.827 10.56
neuron projection terminus 2.132 9.5
lysosomal membrane 2.005 8.2
trans-Golgi network 1.798 8.02
clathrin-coated vesicle 1.877 7.82
coated vesicle 1.745 7.82
dendrite 1.548 7.12
synapse part 1.513 5.74

Protein sequence

External link(s) Protein: ENSSTOP00000007704   Gene: ENSSTOG00000008600   Transcript: ENSSTOT00000008596
Sequence length 479
Comment pep:known_by_projection scaffold:spetri2:JH393361.1:5106285:5117843:1 gene:ENSSTOG00000008600 transcript:ENSSTOT00000008596 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
LFWREKLTMKLLLLILVLWVTELGAASQAKVISPTEMDEEFAEMYLNHFYGLTETIPMTK
MKISRDSLKEKIQEMQKFFGLNVTGQLDTSTLEVMHKPRCGVPDVHHYSTFQGRPVWKKH
EITYRINNYTPDMKKEDVDYAIQKAFQVWSDVTPLKFRRVHAGEADIMISFANGEKAHGD
FNPFDGKDGILAHAYEPGPGIGGDAHFDEAETWSKNQQGRNLFLVAVHELGHSLGLGHSN
DRKAIMYPNYGYLDPNTFHLSSDDIRGIQSLYGGPEKHQPMPNPDRPKPAVCDPNLSFDA
VTTLGDKIIFFKDGVFWWKFPETSKTGISSISSLWPTLPSGIQAAYEIEARKQVFLFKDD
KYWLLSNLRLQPNYPKSIYSLGFPKYVKKIDGAVFNPLLYKTYFFVNSWYWRYDERNQRM
DPGYPRQITKNFPGIGPKIDAVFYFKRNYYFFQGSTQLQYDVMLHRVTKRLRSSNWFGC
Download sequence
Identical sequences I3MBX4
ENSSTOP00000007704 ENSSTOP00000007704

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