SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for ENSSTOP00000007704 from Ictidomys tridecemlineatus 76_2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSSTOP00000007704
Domain Number 1 Region: 287-479
Classification Level Classification E-value
Superfamily Hemopexin-like domain 1.7e-63
Family Hemopexin-like domain 0.00000339
Further Details:      
 
Domain Number 2 Region: 110-274
Classification Level Classification E-value
Superfamily Metalloproteases ("zincins"), catalytic domain 7.1e-56
Family Matrix metalloproteases, catalytic domain 0.000001
Further Details:      
 
Domain Number 3 Region: 38-105
Classification Level Classification E-value
Superfamily PGBD-like 1.51e-19
Family MMP N-terminal domain 0.0009
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
metallopeptidase activity 2.041 167.45
endopeptidase activity 1.576 149.51
zinc ion binding 1.567 42.55
growth factor receptor binding 2.175 16
cytokine receptor binding 1.96 16
enzyme activator activity 1.426 14.68
integrin binding 1.558 12.31
fibronectin binding 2.151 10.88
serine hydrolase activity 1.585 10.2
peptide transporter activity 1.652 9.95
Cellular Component IC (bits) H-Score
Golgi lumen 2.204 18.78
brush border 1.374 15.66
neuron projection terminus 2.128 10.01
exocytic vesicle 1.966 9.77
Golgi membrane 1.599 9.32
trans-Golgi network 1.734 9.32
vacuolar part 1.526 6.31
host intracellular part 1.994 5.4
dendrite 1.581 5.09
lysosomal membrane 1.908 5.02

Protein sequence

External link(s) Protein: ENSSTOP00000007704   Gene: ENSSTOG00000008600   Transcript: ENSSTOT00000008596
Sequence length 479
Comment pep:known_by_projection scaffold:spetri2:JH393361.1:5106285:5117843:1 gene:ENSSTOG00000008600 transcript:ENSSTOT00000008596 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
LFWREKLTMKLLLLILVLWVTELGAASQAKVISPTEMDEEFAEMYLNHFYGLTETIPMTK
MKISRDSLKEKIQEMQKFFGLNVTGQLDTSTLEVMHKPRCGVPDVHHYSTFQGRPVWKKH
EITYRINNYTPDMKKEDVDYAIQKAFQVWSDVTPLKFRRVHAGEADIMISFANGEKAHGD
FNPFDGKDGILAHAYEPGPGIGGDAHFDEAETWSKNQQGRNLFLVAVHELGHSLGLGHSN
DRKAIMYPNYGYLDPNTFHLSSDDIRGIQSLYGGPEKHQPMPNPDRPKPAVCDPNLSFDA
VTTLGDKIIFFKDGVFWWKFPETSKTGISSISSLWPTLPSGIQAAYEIEARKQVFLFKDD
KYWLLSNLRLQPNYPKSIYSLGFPKYVKKIDGAVFNPLLYKTYFFVNSWYWRYDERNQRM
DPGYPRQITKNFPGIGPKIDAVFYFKRNYYFFQGSTQLQYDVMLHRVTKRLRSSNWFGC
Download sequence
Identical sequences I3MBX4
ENSSTOP00000007704 ENSSTOP00000007704

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]