SUPERFAMILY 1.75 HMM library and genome assignments server

Domain assignment for ENSDORP00000001415 from Dipodomys ordii 76_1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSDORP00000001415
Domain Number 1 Region: 63-226
Classification Level Classification E-value
Superfamily Metalloproteases ("zincins"), catalytic domain 2.37e-55
Family Matrix metalloproteases, catalytic domain 0.00000118
Further Details:      
 
Domain Number 2 Region: 1-56
Classification Level Classification E-value
Superfamily PGBD-like 4.12e-18
Family MMP N-terminal domain 0.00091
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
endopeptidase activity 1.536 148.91
metalloendopeptidase activity 2.043 148.91
zinc ion binding 1.65 43.49
integrin binding 1.779 17.72
growth factor receptor binding 1.998 15.09
cytokine receptor binding 2.036 15.09
enzyme activator activity 1.376 14.48
amide binding 1.716 13.08
cell adhesion molecule binding 1.514 11.59
collagen binding 1.844 5.54
Cellular Component IC (bits) H-Score
brush border 1.477 22.56
secretory granule 1.818 10.6
neuron projection terminus 2.132 10.38
lysosomal membrane 1.986 8.14
trans-Golgi network 1.793 7.96
lytic vacuole 1.571 7.43
vacuolar part 1.621 7.24
dendrite 1.585 7.21
transferase complex 1.423 5.58
nucleoplasm part 1.496 5.58

Protein sequence

External link(s) Protein: ENSDORP00000001415   Gene: ENSDORG00000001516   Transcript: ENSDORT00000001517
Sequence length 230
Comment pep:known_by_projection scaffold:dipOrd1:scaffold_35651:5060:9513:1 gene:ENSDORG00000001516 transcript:ENSDORT00000001517 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
NYLERFYVHNSKRKEANTFETKLKEMQRFFGLPVTGKLNSRVIEIMQKPRCGVPDVAEFS
LSPGPSKWPFNIISYRIVSYTSDLPQDVVDEIVAKALSLWSEKTPLKFYRVKSGIADIMI
SFARGVHGDFYPFDGPGNTLAHAFAPGLGLGGDAHFDKDEHWTDSSSSLGINFLYAATHE
LGHSLGLGHSSDFDAVMYPTYKTEEKQDFKLAPDDIKGIQKLYGKRDSSM
Download sequence
Identical sequences ENSDORP00000001415 ENSDORP00000001415

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