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Domain assignment for jgi|Lacbi1|321555|fgenesh3_pg.C_scaffold_2000089 from Laccaria bicolor S238N-H82

Domain architecture


Domain assignment details

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Strong hits

Sequence:  jgi|Lacbi1|321555|fgenesh3_pg.C_scaffold_2000089
Domain Number 1 Region: 5-156
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 3.51e-20
Family G proteins 0.029
Further Details:      
 
Weak hits

Sequence:  jgi|Lacbi1|321555|fgenesh3_pg.C_scaffold_2000089
Domain Number - Region: 6-88,219-255,315-336,366-444
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 0.000505
Family G proteins 0.064
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
actin cytoskeleton 1.332 27.17
transporter complex 1.655 21.75
cilium 1.616 21.53
chromosomal part 1.456 20.39
ciliary part 1.785 20.28
midbody 2.192 17.88
side of membrane 1.587 15.98
protein-DNA complex 1.891 15.71
endosome 1.317 12.57
plasma membrane protein complex 1.484 10.85

Protein sequence

External link(s) jgi|Lacbi1|321555|fgenesh3_pg.C_scaffold_2000089
Sequence length 780
Sequence
MKPAALIAIMGGTGCGKSTFINTIVGKDVTDVGHGLESQTAEVKEYEFLIPNGIPVTLAD
TPGFNDYNESGGKSDLVILREIGGYLKAKYDKKRKFSGILYLHNIADPKVGGSSQRNIAM
FKKLCGPDPLKNVVVVTTFWDEVNMTQGVKNEAELKTKDKFFKELVDGKCRFARFGKYSP
EKSPKGPEFPPPISIVSDLLALNPVFVEMQRELAEGKTVEKTSAGVVLYKELQELNRQQE
KDISDLNQKIAELKSINTSDKVAREALEDECIALKAQLEELVTKQRNLDQEVHSDGSELV
SAIPPPRREREVLAKQRELDLDNIRHIELQHELELLKTQHAKEILQSQLQIRSLLDGNSH
DAYQRSQLERLCEDLTATVSDLSQSLIKLRETKEQDVLARTAELAQECAQLRATVTTHSK
TLAHLELQLKLSQEAQEKMASELSGKSDNHTSSSTPSPDGKGGADPASKDEKSTKNTGPD
YVYYRLYTRLGAFESNHPLYKNDRFIGRIPTKSFSPPHTVASIKLSLCRLEGLSEPDKAL
LFTPLSSPAPKADSARLSLEGPSGPGLSEQDPIALVVESEMRTEEVAAQLEKLPKRSDDT
KVHYGKSCRRLLLIWCTHQLNSGKGDEKAKTSFDKSDISLGRINTLFITPPHTAGSLKAC
IAKVEGLRVTQGHALYKDKDILMSDTDVITFQDKTYPGSDEGNPVALATDSKFTKRAQLT
STYTFPPADYKVLFSPTWLSTNKDEIVHTDGVIVTDGYLVINSKGEKGFVHKAKITLIDR
Download sequence
Identical sequences B0CTC6
jgi|Lacbi1|321555|fgenesh3_pg.C_scaffold_2000089 29883.JGI321555

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