SUPERFAMILY 1.75 HMM library and genome assignments server

Domain assignment for ENSOPRP00000003261 from Ochotona princeps 76

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSOPRP00000003261
Domain Number 1 Region: 109-273
Classification Level Classification E-value
Superfamily Metalloproteases ("zincins"), catalytic domain 2.52e-57
Family Matrix metalloproteases, catalytic domain 0.00000582
Further Details:      
 
Domain Number 2 Region: 292-483
Classification Level Classification E-value
Superfamily Hemopexin-like domain 1.26e-50
Family Hemopexin-like domain 0.0000117
Further Details:      
 
Domain Number 3 Region: 27-105
Classification Level Classification E-value
Superfamily PGBD-like 9.58e-19
Family MMP N-terminal domain 0.00068
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
brush border 1.477 22.56
Golgi lumen 2.24 12.25
secretory granule 1.818 10.6
neuron projection terminus 2.132 10.38
lysosomal membrane 1.986 8.14
trans-Golgi network 1.793 7.96
lytic vacuole 1.571 7.43
vacuolar part 1.621 7.24
dendrite 1.585 7.21
transferase complex 1.423 5.58
Molecular Function IC (bits) H-Score
endopeptidase activity 1.536 148.91
metalloendopeptidase activity 2.043 148.91
zinc ion binding 1.65 43.49
integrin binding 1.779 17.72
growth factor receptor binding 1.998 15.09
cytokine receptor binding 2.036 15.09
enzyme activator activity 1.376 14.48
amide binding 1.716 13.08
cell adhesion molecule binding 1.514 11.59
collagen binding 1.844 5.54

Protein sequence

External link(s) Protein: ENSOPRP00000003261   Gene: ENSOPRG00000003551   Transcript: ENSOPRT00000003549
Sequence length 483
Comment pep:known_by_projection genescaffold:pika:GeneScaffold_2354:271142:306279:-1 gene:ENSOPRG00000003551 transcript:ENSOPRT00000003549 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MKVLPASGLAVFLIMALKFSAAAPSLFTATPRTWRNNFHLAQAYLDKYYTKKGGTQVGEM
VARGGNAMVKKIKELQAFFGLQVTGKLDQNTMDVIKKPRCGVPDVANYRLFPGEPKWKKN
TLTYRVSKYTSSMAPVEVDKAVEMALRAWSSAVPLNFVRVNTGEADIMISFETGDHGDSY
PFDGPRGTLAHAFAPGEGLGGDTHFDNAEKWTMGTNGFNLFTVAAHEFGHALGLAHSTDP
TALMYPTYKYQNPYGFHLPKDDVRGIQALYGPRKPFLGKPTLPHIPPHKPILPDLCDSSS
SFDAVTMLGKELLFFRDRIFWRRQLHLPTGVQPSTITSSFPQLMSNVDAAYEVAERGTAY
FFKGPHYWVTRGFQMQGSPRTIYDXXXXXXXXXXXXXXXLKEPQKTLFFVGDEYYSFDEQ
KRKMEKDYPKSIEEEFSGVNGQIDAAVELNGYIYFFSGPKTYKYDTEKEDVVSVMKSNSW
IGC
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Identical sequences ENSOPRP00000003261 ENSOPRP00000003261

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