SUPERFAMILY 1.75 HMM library and genome assignments server

Domain assignment for ENSRNOP00000000635 from Rattus norvegicus 76_5.0

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000000635
Domain Number 1 Region: 88-381
Classification Level Classification E-value
Superfamily Mitochondrial carrier 1.96e-33
Family Mitochondrial carrier 0.0082
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
organelle inner membrane 1.669 61.59
mitochondrial envelope 1.573 58.57
microtubule cytoskeleton 1.341 20.14
spindle 1.789 20.14
plastid 1.6 10.23
chloroplast part 1.896 10.23
ribonucleoprotein complex 1.414 6.87
cytoplasmic ribonucleoprotein granule 1.98 6.87
lipid particle 1.469 4.97
intrinsic component of organelle membrane 2.09 4.87

Protein sequence

External link(s) Protein: ENSRNOP00000000635   Gene: ENSRNOG00000000527   Transcript: ENSRNOT00000000635
Sequence length 389
Comment pep:known chromosome:Rnor_5.0:20:9177064:9200859:-1 gene:ENSRNOG00000000527 transcript:ENSRNOT00000000635 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MGASDPEVAPWAPGRAAGMAGAGAGAGARGGAPAGVEARARDPPPAHRAHPRHPRPAAQP
SARRMDGGAGVPGSGDNAPTTEALFVALGAGVTALSHPLLYVKLLIQVGHEPMPPTLGTN
VLGRKVLYLPSFFTYAKYIVQVDGKIGLFRGLSPRLMSNALSTVTRGSMKKVFPPDEIEQ
VSNKDDMKTSLKKVVKETSYEMMMQCVSRMLAHPLHVISMRCMVQFVGREAKYSGVLSSI
GKIFKEEGLLGFFVGLIPHLLGDVVFLWGCNLLAHFINAYLVDDSVSDTPGGLGNDQNPG
SQFSQALAIRSYTKFAMGIAVSMLTYPFLLVGDLMAVNNCGLQAGLPPYSPVFKSWIHCW
KYLSVQGQLFRGSSLLFRRVSSGSCFALE
Download sequence
Identical sequences B0BN30
ENSRNOP00000000635 10116.ENSRNOP00000000635 ENSRNOP00000000635

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