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Domain assignment for ENSRNOP00000037549 from Rattus norvegicus 76_5.0

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000037549
Domain Number 1 Region: 334-528
Classification Level Classification E-value
Superfamily Hemopexin-like domain 7.85e-63
Family Hemopexin-like domain 0.00000533
Further Details:      
 
Domain Number 2 Region: 101-293
Classification Level Classification E-value
Superfamily Metalloproteases ("zincins"), catalytic domain 2.45e-44
Family Matrix metalloproteases, catalytic domain 0.0000495
Further Details:      
 
Domain Number 3 Region: 41-114
Classification Level Classification E-value
Superfamily PGBD-like 4.71e-17
Family MMP N-terminal domain 0.0037
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Golgi lumen 2.192 19.32
brush border 1.358 15.67
cell surface 1.26 11.29
neuron projection terminus 2.098 10.13
exocytic vesicle 2.005 10.08
organelle subcompartment 1.51 9.21
Golgi membrane 1.579 9.21
trans-Golgi network 2.053 9.21
lytic vacuole 1.528 8.74
vacuolar part 1.508 7.04

Protein sequence

External link(s) Protein: ENSRNOP00000037549   Gene: ENSRNOG00000023643   Transcript: ENSRNOT00000035881
Sequence length 587
Comment pep:known chromosome:Rnor_5.0:12:32636907:32663678:-1 gene:ENSRNOG00000023643 transcript:ENSRNOT00000035881 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MGRRPRGPGSPRGPGPPRPGPGLPPLLLMLALAAHGGCAAPAPRAEDLSLGVEWLSKFGY
LPPADPATGQLQTQEELSKAITAMQQFGGLETTGILDEATLALMKTPRCSLPDLPLGAQS
RRRRQTPLPTKWSKRNLSWRVRTFPRDSPLGRDTVRALMYYALKVWSDITPLNFHEVAGN
MADIQIDFSKADHNDGYPFDGPGGTVAHAFFPGDHHTAGDTHFDDDEAWTFRSSDAHGMD
LFAVAVHEFGHAIGLSHVAAPSSIMQPYYQGPVGDPLRYGLPYEDRVRVWQLYGVRESVS
PTAQLDTPEPEEPPLLPEPPNNRSSTPPQKDVPHRCTAHFDAVAQIRGEAFFFKGKYFWR
LTRDRHLVSLQPAQMHRFWRGLPLHLDSVDAVYERTSDHKIVFFKGDRYWVFKDNNVEEG
YPRPVSDFSLPPGGIDAVFSWAHNDRTYFFKDQLYWRYDDHTRRMDPGYPAQGPLWRGVP
SVLDDAMRWSDGASYFFRGQEYWKVLDGELEAAPGYPQSTARDWLVCGEQLADAEDVGPG
PQGRSGAQDGLAVCSCTSDAHRSALPPLLLLPPLLWGLWTSVSSTAS
Download sequence
Identical sequences D3ZXJ0
ENSRNOP00000037549 ENSRNOP00000037549 10116.ENSRNOP00000037549

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