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Domain assignment for ENSRNOP00000056892 from Rattus norvegicus 76_5.0

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSRNOP00000056892
Domain Number 1 Region: 30-294
Classification Level Classification E-value
Superfamily Mitochondrial carrier 2.09e-44
Family Mitochondrial carrier 0.0016
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
mitochondrial envelope 1.593 71.85
organelle inner membrane 1.692 70.45
microtubule cytoskeleton 1.346 24.58
spindle 1.756 24.58
plastid 1.557 10.66
chloroplast part 1.842 10.66
plastid envelope 2.242 10.66
microbody 1.816 7.94
intracellular ribonucleoprotein complex 1.323 7.38
cytoplasmic ribonucleoprotein granule 1.909 7.38

Protein sequence

External link(s) Protein: ENSRNOP00000056892   Gene: ENSRNOG00000039278   Transcript: ENSRNOT00000060149
Sequence length 298
Comment pep:known chromosome:Rnor_5.0:5:65629577:65637295:-1 gene:ENSRNOG00000039278 transcript:ENSRNOT00000060149 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MMGSEAHDKRPPMLTSSNQDLSPHLADVGQIKHYFCGCCAAFNNVAITYPVQKILFRQQL
YGIKTRDAILQLRKDGFRNLYRGILPPLMQKTTTLALMFGLYEDLSRLLRKHVSNAPEFA
TRSVAALLAGTTEAILTPLERVQTLLQDHKHHDKFTNTYQAFRALRCHGVAEYYRGLVPI
LFRNGFSNILFFGLRGPIKEHLPTATTNSEHLVNDFICGGVLGAMLGFLSFPVNVVKARI
QSQIGGPFQSLPMVFKTIWIERDRKLINLFRGAHLNYHRSLISWGIINATYEFLLKIV
Download sequence
Identical sequences C0PBR3 Q52KK3
ENSRNOP00000056892 ENSRNOP00000065025 ENSRNOP00000056892 10116.ENSRNOP00000056892

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