SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for R0010W from Saccharomyces cerevisiae SGD

Domain architecture

Domain assignment details

show help)
Strong hits

Sequence:  R0010W
Domain Number 1 Region: 136-422
Classification Level Classification E-value
Superfamily DNA breaking-rejoining enzymes 7.53e-121
Family Lambda integrase-like, catalytic core 0.0000000000381
Further Details:      
Domain Number 2 Region: 2-129
Classification Level Classification E-value
Superfamily lambda integrase-like, N-terminal domain 2.35e-83
Family lambda integrase-like, N-terminal domain 0.000000213
Further Details:      

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Locus: R0010W   Protein: S000029654
Sequence length 423
Comment FLP1 SGDID:S000029654, 2-micron plasmid from 252-1523, Verified ORF, "Site-specific recombinase encoded on the 2-micron plasmid, required for 2-micron plasmid propagation as part of a plasmid amplification system that compensates for any copy number decreases caused by missegregation events"
Download sequence
Identical sequences P03870
4932.R0010W gi|11466068|ref|NP_040488.1|NC_001398 R0010W

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]