SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for YAR008W from Saccharomyces cerevisiae SGD

Domain architecture

Domain assignment details

show help)
Strong hits

Sequence:  YAR008W
Domain Number 1 Region: 182-265
Classification Level Classification E-value
Superfamily tRNA-intron endonuclease catalytic domain-like 2.62e-22
Family tRNA-intron endonuclease catalytic domain-like 0.0055
Further Details:      

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Locus: YAR008W   Protein: S000000066
Sequence length 275
Comment SEN34 SGDID:S000000066, Chr I from 158967-159794, Verified ORF, "Subunit of the tRNA splicing endonuclease, which is composed of Sen2p, Sen15p, Sen34p, and Sen54p; Sen34p contains the active site for tRNA 3' splice site cleavage and has similarity to Sen2p and to Archaeal tRNA splicing endonuclease"
Download sequence
Identical sequences A7A0H1 G2W8N4 P39707
NP_009405.1.97178 YAR008W 4932.YAR008W YAR008W YAR008W YAR008W YAR008W 355181 tr|A7A0H1|A7A0H1_YEAS7 YAR008W YAR008W

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]