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Domain assignment for YAR008W from Saccharomyces cerevisiae SGD

Domain architecture


Domain assignment details

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Strong hits

Sequence:  YAR008W
Domain Number 1 Region: 182-265
Classification Level Classification E-value
Superfamily tRNA-intron endonuclease catalytic domain-like 2.62e-22
Family tRNA-intron endonuclease catalytic domain-like 0.0055
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
ncRNA processing 1.821 15.39
ncRNA metabolic process 1.499 12.16
RNA processing 1.497 10.39
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
endonuclease activity 1.995 156.47
nuclease activity 1.592 13.08

Protein sequence

External link(s) Locus: YAR008W   Protein: S000000066
Sequence length 275
Comment SEN34 SGDID:S000000066, Chr I from 158967-159794, Verified ORF, "Subunit of the tRNA splicing endonuclease, which is composed of Sen2p, Sen15p, Sen34p, and Sen54p; Sen34p contains the active site for tRNA 3' splice site cleavage and has similarity to Sen2p and to Archaeal tRNA splicing endonuclease"
Sequence
MPPLVFDIDHIKLLRKWGICGVLSGTLPTAAQQNVFLSVPLRLMLEDVLWLHLNNLADVK
LIRQEGDEIMEGITLERGAKLSKIVNDRLNKSFEYQRKFKKDEHIAKLKKIGRINDKTTA
EELQRLDKSSNNDQLIESSLFIDIANTSMILRDIRSDSDSLSRDDISDLLFKQYRQAGKM
QTYFLYKALRDQGYVLSPGGRFGGKFIAYPGDPLRFHSHLTIQDAIDYHNEPIDLISMIS
GARLGTTVKKLWVIGGVAEETKETHFFSIEWAGFG
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Identical sequences A7A0H1 G2W8N4 P39707
tr|A7A0H1|A7A0H1_YEAS7 YAR008W YAR008W YAR008W 4932.YAR008W YAR008W 355181 YAR008W YAR008W YAR008W

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