SUPERFAMILY 1.75 HMM library and genome assignments server

Domain assignment for YAR008W from Saccharomyces cerevisiae SGD

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  YAR008W
Domain Number 1 Region: 182-265
Classification Level Classification E-value
Superfamily tRNA-intron endonuclease catalytic domain-like 2.62e-22
Family tRNA-intron endonuclease catalytic domain-like 0.0055
Further Details:      
 

Protein sequence

External link(s) Locus: YAR008W   Protein: S000000066
Sequence length 275
Comment SEN34 SGDID:S000000066, Chr I from 158967-159794, Verified ORF, "Subunit of the tRNA splicing endonuclease, which is composed of Sen2p, Sen15p, Sen34p, and Sen54p; Sen34p contains the active site for tRNA 3' splice site cleavage and has similarity to Sen2p and to Archaeal tRNA splicing endonuclease"
Sequence
MPPLVFDIDHIKLLRKWGICGVLSGTLPTAAQQNVFLSVPLRLMLEDVLWLHLNNLADVK
LIRQEGDEIMEGITLERGAKLSKIVNDRLNKSFEYQRKFKKDEHIAKLKKIGRINDKTTA
EELQRLDKSSNNDQLIESSLFIDIANTSMILRDIRSDSDSLSRDDISDLLFKQYRQAGKM
QTYFLYKALRDQGYVLSPGGRFGGKFIAYPGDPLRFHSHLTIQDAIDYHNEPIDLISMIS
GARLGTTVKKLWVIGGVAEETKETHFFSIEWAGFG
Download sequence
Identical sequences A7A0H1 G2W8N4 P39707
YAR008W 4932.YAR008W YAR008W YAR008W YAR008W YAR008W tr|A7A0H1|A7A0H1_YEAS7 355181 YAR008W YAR008W

Jump to [ Top of page · Domain architecture · Domain assignment details ]