SUPERFAMILY 1.75 HMM library and genome assignments server

Domain assignment for YBL002W from Saccharomyces cerevisiae SGD

Domain architecture

Domain assignment details

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Strong hits

Sequence:  YBL002W
Domain Number 1 Region: 13-128
Classification Level Classification E-value
Superfamily Histone-fold 1.6e-50
Family Nucleosome core histones 0.0000105
Further Details:      

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
nucleoplasm part 1.419 38.26
chromosomal part 1.478 32.11
transcription factor complex 1.881 31.3
DNA-directed RNA polymerase complex 2.004 27.86
SWI/SNF superfamily-type complex 2.177 23.8
lipid particle 1.519 21.32
nuclear chromosome 1.723 11.75
replication fork 2.197 11.75
condensed chromosome 2.187 9.51
methyltransferase complex 2.218 8.09

Protein sequence

External link(s) Locus: YBL002W   Protein: S000000098
Sequence length 131
Comment HTB2 SGDID:S000000098, Chr II from 236495-236890, Verified ORF, "One of two nearly identical (see HTB1) histone H2B subtypes required for chromatin assembly and chromosome function; Rad6p-Bre1p-Lge1p mediated ubiquitination regulates transcriptional activation, meiotic DSB formation and H3 methylation"
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Identical sequences A6ZKU6 B3LNE1 C7GM50 C8Z3Z6 E7K9N9 E7KK50 E7LR39 E7Q0U2 E7QBB9 G2W907 H0GC78 N1P9S0 P02294 W7PQ44 W7R182
YBL002W YBL002W YBL002W YBL002W YBL002W YBL002W YBL002W YBL002W YBL002W YBL002W SCRT_02965 YBL002W YBL002W YBL002W tr|A6ZKU6|A6ZKU6_YEAS7 YBL002W YBL002W YBL002W YBL002W 4932.YBL002W YBL002W YBL002W YBL002W

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