SUPERFAMILY 1.75 HMM library and genome assignments server

Domain assignment for YBR084C-A from Saccharomyces cerevisiae SGD

Domain architecture


Domain assignment details

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Strong hits

Sequence:  YBR084C-A
Domain Number 1 Region: 3-143
Classification Level Classification E-value
Superfamily Ribosomal protein L19 (L19e) 7.06e-57
Family Ribosomal protein L19 (L19e) 0.00014
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
translation 1.518 6.87
Molecular Function IC (bits) H-Score
structural constituent of ribosome 1.984 15.47
Cellular Component IC (bits) H-Score
cytosolic ribosome 2.218 40.58
ribosomal subunit 2.011 14.36
ribonucleoprotein complex 1.414 9.11
cytosol 1.301 3.94

Protein sequence

External link(s) Locus: YBR084C-A   Protein: S000002156
Sequence length 189
Comment RPL19A SGDID:S000002156, Chr II from 415255-415254,414747-414180, reverse complement, Verified ORF, "Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl19Bp and has similarity to rat L19 ribosomal protein; rpl19a and rpl19b single null mutations result in slow growth, while the double null mutation is lethal"
Sequence
MANLRTQKRLAASVVGVGKRKVWLDPNETSEIAQANSRNAIRKLVKNGTIVKKAVTVHSK
SRTRAHAQSKREGRHSGYGKRKGTREARLPSQVVWIRRLRVLRRLLAKYRDAGKIDKHLY
HVLYKESKGNAFKHKRALVEHIIQAKADAQREKALNEEAEARRLKNRAARDRRAQRVAEK
RDALLKEDA
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Identical sequences A6ZKS1 C8Z3W9 G2W991 P0CX82 P0CX83 W7PX96 W7R1D4
YBL027W YBR084C-A YBL027W YBL027W YBR084C-A tr|A6ZKS1|A6ZKS1_YEAS7 4932.YBL027W 4932.YBR084C-A YBL027W YBR084C-A YBR084C-A YBL027W YBR084C-A YBL027W YBR084C-A YBL027W YBR084C-A YBL027W YBR084C-A YBL027W YBR084C-A YBL027W YBR084C-A YBL027W YBR084C-A YBL027W YBR084C-A YBL027W YBR084C-A 1vw8.S 1vwu.S 1vxv.S 1vxy.S 2ww9.J 2wwa.J 2wwb.J 3izc.T 3izs.T 3j65.R 3o58.S 3o5h.S 3u5e.R 3u5i.R 4b6a.R 4cuw.R YBL027W YBR084C-A YBL027W YBR084C-A YBR084C-A YBL027W YBR084C-A YBL027W YBR084C-A

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