SUPERFAMILY 1.75 HMM library and genome assignments server

Domain assignment for YBR089C-A from Saccharomyces cerevisiae SGD

Domain architecture

Domain assignment details

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Strong hits

Sequence:  YBR089C-A
Domain Number 1 Region: 12-96
Classification Level Classification E-value
Superfamily HMG-box 7.39e-29
Family HMG-box 0.00000568
Further Details:      

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
transcription factor complex 1.881 22.75
ribonucleoprotein complex 1.415 22.43
outer membrane 2.239 20.05
mitochondrial membrane part 1.917 20.05
mitochondrial envelope 1.57 20.05
SWI/SNF superfamily-type complex 2.177 8.26
perinuclear region of cytoplasm 1.467 7.99
mitochondrial matrix 1.716 7.36
ribonucleoprotein granule 1.998 6.49
nucleoplasm part 1.419 5.49

Protein sequence

External link(s) Locus: YBR089C-A   Protein: S000002157
Sequence length 99
Comment NHP6B SGDID:S000002157, Chr II from 426483-426184, reverse complement, Verified ORF, "High-mobility group non-histone chromatin protein, functionally redundant with Nhp6Ap; homologous to mammalian high mobility group proteins 1 and 2; acts to recruit transcription factor Rcs1p to certain promoters"
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Identical sequences 4932.YBR089C-A YBR089C-A

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