SUPERFAMILY 1.75 HMM library and genome assignments server

Domain assignment for YBR278W from Saccharomyces cerevisiae SGD

Domain architecture


Domain assignment details

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Strong hits

Sequence:  YBR278W
Domain Number 1 Region: 12-91
Classification Level Classification E-value
Superfamily Histone-fold 0.00000000000184
Family TBP-associated factors, TAFs 0.0074
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
chromatin 1.822 34.19
transferase complex 1.423 33.36
chromosomal part 1.477 32.13
transcription factor complex 1.912 30.71
RNA polymerase complex 1.998 27.82
SWI/SNF superfamily-type complex 2.178 23.82
nuclear chromosome 1.73 10.8
replication fork 2.208 10.8
lipid particle 1.469 9.76
condensed chromosome 2.187 9.48

Protein sequence

External link(s) Locus: YBR278W   Protein: S000000482
Sequence length 201
Comment DPB3 SGDID:S000000482, Chr II from 760290-760895, Verified ORF, "Third-largest subunit of DNA polymerase II (DNA polymerase epsilon), required to maintain fidelity of chromosomal replication and also for inheritance of telomeric silencing; mRNA abundance peaks at the G1/S boundary of the cell cycle"
Sequence
MSNLVKEKAPVFPISKVKKIAKCDPEYVITSNVAISATAFAAELFVQNLVEESLVLAQLN
SKGKTSLRLSLNSIEECVEKRDNFRFLEDAIKQLKKNSALDKKRELNMQPGRSDQEVVIE
EPELHEDDGVEEEEEEDEVSEEEEPVHNEELLDDSKDQQNDKSTRSVASLLSRFQYKSAL
DVGEHSDSSDIEVDHTKSTDP
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Identical sequences A6ZLL6 B5VEM3 C7GMV4 D3UF25 E7K9M1 E7KKP0 E7LRS2 E7NF68 E7QBT4 G2W9T1 H0GCW9 N1P8N3 P27344 W7PLN1 W7R5T6
tr|A6ZLL6|A6ZLL6_YEAS7 YBR278W YBR278W YBR278W YBR278W YBR278W YBR278W 4932.YBR278W YBR278W YBR278W YBR278W YBR278W YBR278W YBR278W YBR278W YBR278W YBR278W YBR278W YBR278W YBR278W YBR278W YBR278W

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