SUPERFAMILY 1.75 HMM library and genome assignments server

Please note: Superfamily is currently under maintenance and some functionality may be limited. Please bear with us as we fix these problems.

Domain assignment for YDL244W from Saccharomyces cerevisiae SGD

Domain architecture

Domain assignment details

show help)
Strong hits

Sequence:  YDL244W
Domain Number 1 Region: 5-239
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like II 3.96e-33
Family Phosphate binding protein-like 0.03
Further Details:      

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
receptor complex 1.511 69.17
synaptic membrane 1.863 55.61
synapse part 1.513 41.87
neuron spine 2.168 39.06
postsynaptic density 1.822 36.95
integral to plasma membrane 1.469 33.31
dendrite 1.548 24.67
secretory granule 1.827 12.97
coated pit 2.132 9.26
external encapsulating structure 1.635 8.49

Protein sequence

External link(s) Locus: YDL244W   Protein: S000002403
Sequence length 340
Comment THI13 SGDID:S000002403, Chr IV from 16204-17226, Verified ORF, "Protein involved in synthesis of the thiamine precursor hydroxymethylpyrimidine (HMP); member of a subtelomeric gene family including THI5, THI11, THI12, and THI13"
Download sequence
Identical sequences A6ZQB4 B3LHB9 E7KE04 E7QM81 H0GIZ6 Q07748
YFL058W YJR156C YNL332W YDL244W YJR156C YNL332W YDL244W tr|A6ZQB4|A6ZQB4_YEAS7 YFL058W YFL058W YDL244W YJR156C YDL244W YDL244W YJR156C YDL244W YJR156C YNL332W 4932.YDL244W YJR156C YDL244W YJR156C SCRT_00731 SCRT_03455 YDL244W YNL332W

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]