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Domain assignment for YDR062W from Saccharomyces cerevisiae SGD

Domain architecture

Domain assignment details

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Strong hits

Sequence:  YDR062W
Domain Number 1 Region: 105-524
Classification Level Classification E-value
Superfamily PLP-dependent transferases 5.32e-93
Family GABA-aminotransferase-like 0.00000917
Further Details:      

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
transferase complex 1.368 42.09
nuclear outer membrane-endoplasmic reticulum membrane network 1.526 42.09
endoplasmic reticulum subcompartment 1.588 42.09
oxidoreductase complex 1.855 11.49
mitochondrial matrix 1.61 10.78
microbody 1.855 5.16
organelle envelope 1.404 4.97

Protein sequence

External link(s) Locus: YDR062W   Protein: S000002469
Sequence length 561
Comment LCB2 SGDID:S000002469, Chr IV from 576472-578157, Verified ORF, "Component of serine palmitoyltransferase, responsible along with Lcb1p for the first committed step in sphingolipid synthesis, which is the condensation of serine with palmitoyl-CoA to form 3-ketosphinganine"
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Identical sequences A0A0L8VSU5 B3LGK8 B5VFW1 C7GVS4 C8Z4Y1 N1P676 P40970
NP_010347.1.97178 YDR062W YDR062W YDR062W 4932.YDR062W YDR062W YDR062W YDR062W SCRT_00453 YDR062W YDR062W YDR062W

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