SUPERFAMILY 1.75 HMM library and genome assignments server

Domain assignment for YEL034W from Saccharomyces cerevisiae SGD

Domain architecture


Domain assignment details

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Strong hits

Sequence:  YEL034W
Domain Number 1 Region: 14-92
Classification Level Classification E-value
Superfamily Translation proteins SH3-like domain 4.01e-29
Family eIF5a N-terminal domain-like 0.00015
Further Details:      
 
Domain Number 2 Region: 85-153
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 4.68e-24
Family Cold shock DNA-binding domain-like 0.00097
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
exosome (RNase complex) 2.218 55.21
nucleoplasm part 1.419 33.74
replication fork 2.197 33.6
nuclear chromosome 1.723 24.38
chromosomal part 1.478 22.67
ribonucleoprotein complex 1.415 20.38
ribosomal subunit 2.011 19.53
DNA-directed RNA polymerase complex 2.004 12.27
ribonucleoprotein granule 1.998 10.37
cytosol 1.305 7.61
Biological Process IC (bits) H-Score
DNA-dependent DNA replication 2.082 68.79
DNA duplex unwinding 1.979 46.97
double-strand break repair 1.882 44.57
tRNA aminoacylation 2.003 38.45
translation 1.522 35.24
telomere organization 2.104 26.38
RNA processing 1.457 21.41
mRNA metabolic process 1.625 21.41
RNA 3'-end processing 2.028 21.41
regulation of DNA replication 2.144 20.27

Protein sequence

External link(s) Locus: YEL034W   Protein: S000000760
Sequence length 157
Comment HYP2 SGDID:S000000760, Chr V from 85676-86149, Verified ORF, "Translation initiation factor eIF-5A, promotes formation of the first peptide bond; similar to and functionally redundant with Anb1p; possible role in translation elongation; undergoes an essential hypusination modification"
Sequence
MSDEEHTFETADAGSSATYPMQCSALRKNGFVVIKSRPCKIVDMSTSKTGKHGHAKVHLV
AIDIFTGKKLEDLSPSTHNMEVPVVKRNEYQLLDIDDGFLSLMNMDGDTKDDVKAPEGEL
GDSLQTAFDEGKDLMVTIISAMGEEAAISFKEAARTD
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Identical sequences A6ZQR6 B3LRY3 C8Z6W1 E7KBK6 E7KMG8 E7LTL9 E7NGS5 E7Q360 E7QDP3 H0GFD5 N1P3S8 P23301 W7PVK9
YEL034W YEL034W YEL034W YEL034W YEL034W YEL034W YEL034W YEL034W YEL034W YEL034W 4932.YEL034W YEL034W SCRT_04437 YEL034W YEL034W tr|A6ZQR6|A6ZQR6_YEAS7 YEL034W YEL034W YEL034W YEL034W YEL034w___KOG3271 YEL034W

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