SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for YER012W from Saccharomyces cerevisiae SGD

Domain architecture

Domain assignment details

show help)
Strong hits

Sequence:  YER012W
Domain Number 1 Region: 2-196
Classification Level Classification E-value
Superfamily N-terminal nucleophile aminohydrolases (Ntn hydrolases) 6.92e-52
Family Proteasome subunits 0.00000000495
Further Details:      

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
side of membrane 1.57 20.91
cell surface 1.26 20.91
intracellular ribonucleoprotein complex 1.323 8.35
cytoplasmic ribonucleoprotein granule 1.909 8.35
cytosolic part 1.678 8.33
external side of plasma membrane 1.863 5.65
extracellular organelle 1.618 5.42
extracellular exosome 1.982 4.48

Protein sequence

External link(s) Locus: YER012W   Protein: S000000814
Sequence length 198
Comment PRE1 SGDID:S000000814, Chr V from 177834-178430, Verified ORF, "Beta 4 subunit of the 20S proteasome; localizes to the nucleus throughout the cell cycle"
Download sequence
Identical sequences B3LS24 B5VHE3 C7GKJ0 C8Z712 E7KBN2 E7KMK1 E7LTQ2 E7NGZ9 E7QDS7 G2WCP3 H0GEZ9 N1PA82 P22141 W7Q4R5 W7QZD7
YER012W YER012W YER012W YER012W YER012W YER012W YER012W YER012W YER012w___KOG0177 YER012W YER012W YER012W 4932.YER012W SCRT_04480 YER012W 1rypK YER012W 1fnt.K 1fnt.Y 1g0u.J 1g0u.X 1g65.J 1g65.X 1jd2.J 1jd2.Q 1ryp.K 1ryp.Y 1vsy.K 1vsy.Y 1z7q.K 1z7q.Y 2f16.J 2f16.X 2fak.J 2fak.X 2fny.J 2fny.X 2gpl.J 2gpl.X 2zcy.J 2zcy.X 3bdm.J 3bdm.X 3d29.J 3d29.X 3dy3.J 3dy3.X 3dy4.J 3dy4.X 3e47.J 3e47.X 3gpj.J 3gpj.X 3gpt.J 3gpt.X 3gpw.J 3gpw.X 3hye.J 3hye.X 3l5q.1 3l5q.O 3mg0.J 3mg0.X 3mg4.J 3mg4.X 3mg6.J 3mg6.X 3mg7.J 3mg7.X 3mg8.J 3mg8.X 3nzj.J 3nzj.X 3nzw.J 3nzw.X 3nzx.J 3nzx.X 3oeu.J 3oeu.X 3oev.J 3oev.X 3okj.J 3okj.X 3sdi.J 3sdi.X 3sdk.J 3sdk.X 3shj.J 3shj.X 3tdd.J 3tdd.X 3un4.J 3un4.X 3un8.J 3un8.X 4b4t.4 4bgr.4 4c0v.4 4cr2.4 4cr3.4 4cr4.4 4eu2.K 4eu2.Y 4fzc.J 4fzc.X 4fzg.J 4fzg.X 4g4s.K 4gk7.J 4gk7.X 4hnp.J 4hnp.X 4hrc.J 4hrc.X 4hrd.J 4hrd.X 4inr.J 4inr.X 4int.J 4int.X 4inu.J 4inu.X 4j70.J 4j70.X 4jsq.J 4jsq.X 4jsu.J 4jsu.X 4jt0.J 4jt0.X 4lqi.J 4lqi.X 4ltc.J 4ltc.X 4nnn.J 4nnn.X 4nnw.J 4nnw.X 4no1.J 4no1.X 4no6.J 4no6.X 4no8.J 4no8.X 4no9.J 4no9.X 4q1s.J 4q1s.X 4qby.J 4qby.X 4qlq.J 4qlq.X 4qls.J 4qls.X 4qlt.J 4qlt.X 4qlu.J 4qlu.X 4qlv.J 4qlv.X 4r02.J 4r02.X YER012W YER012W YER012W YER012W YER012W YER012W

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]