SUPERFAMILY 1.75 HMM library and genome assignments server

Please note: Superfamily is currently under maintenance and some functionality may be limited. Please bear with us as we fix these problems.

Domain assignment for YER082C from Saccharomyces cerevisiae SGD

Domain architecture

Domain assignment details

show help)
Strong hits

Sequence:  YER082C
Domain Number 1 Region: 109-342
Classification Level Classification E-value
Superfamily WD40 repeat-like 1.28e-35
Family WD40-repeat 0.0048
Further Details:      
Weak hits

Sequence:  YER082C
Domain Number - Region: 33-139
Classification Level Classification E-value
Superfamily 39 kda initiator binding protein, IBP39, C-terminal domains 0.00811
Family 39 kda initiator binding protein, IBP39, C-terminal domains 0.0032
Further Details:      

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
ubiquitin ligase complex 1.933 42.44
nucleolus 1.651 36.87
methyltransferase complex 2.218 18.64
cilium 1.61 16.6
nucleoplasm part 1.419 11.44
transcription factor complex 1.881 11.44
cytoplasmic vesicle part 1.737 10.36
cytoplasmic vesicle membrane 1.917 10.36
SWI/SNF superfamily-type complex 2.177 9.97
DNA-directed RNA polymerase complex 2.004 7.97

Protein sequence

External link(s) Locus: YER082C   Protein: S000000884
Sequence length 554
Comment UTP7 SGDID:S000000884, Chr V from 325932-324268, reverse complement, Verified ORF, "Nucleolar protein, component of the small subunit (SSU) processome containing the U3 snoRNA that is involved in processing of pre-18S rRNA"
Download sequence
Identical sequences B3LRK0 B5VHL0 C7GRR5 C8Z794 G2WCX3 H0GF65 N1P3G1 P40055 W7Q4X3 W7RFZ9
YER082C YER082C YER082C YER082C 355302 YER082C YER082C YER082C YER082C SCRT_04560 4932.YER082C YER082C YER082C YER082c___KOG1272 YER082C YER082C YER082C YER082C

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]