SUPERFAMILY 1.75 HMM library and genome assignments server

Domain assignment for YER107C from Saccharomyces cerevisiae SGD

Domain architecture


Domain assignment details

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Strong hits

Sequence:  YER107C
Domain Number 1 Region: 35-332
Classification Level Classification E-value
Superfamily WD40 repeat-like 6.72e-50
Family Cell cycle arrest protein BUB3 0.0012
Further Details:      
 

Protein sequence

External link(s) Locus: YER107C   Protein: S000000909
Sequence length 365
Comment GLE2 SGDID:S000000909, Chr V from 374541-373444, reverse complement, Verified ORF, "Component of the nuclear pore complex required for polyadenylated RNA export but not for protein import, homologous to S. pombe Rae1p"
Sequence
MSFFNRSNTTSALGTSTAMANEKDLANDIVINSPAEDSISDIAFSPQQDFMFSASSWDGK
VRIWDVQNGVPQGRAQHESSSPVLCTRWSNDGTKVASGGCDNALKLYDIASGQTQQIGMH
SAPIKVLRFVQCGPSNTECIVTGSWDKTIKYWDMRQPQPVSTVMMPERVYSMDNKQSLLV
VATAERHIAIINLANPTTIFKATTSPLKWQTRCVACYNEADGYAIGSVEGRCSIRYIDDG
MQKKSGFSFKCHRQTNPNRAPGSNGQSLVYPVNSIAFHPLYGTFVTAGGDGTFNFWDKNQ
RHRLKGYPTLQASIPVCSFNRNGSVFAYALSYDWHQGHMGNRPDYPNVIRLHATTDEEVK
EKKKR
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Identical sequences A6ZR63 B3LRM4 C7GS78 C8Z7C5 E7KMR8 E7LTJ0 E7NGV7 E7QE02 G2WD16 P40066
YER107C YER107C YER107C YER107C YER107C YER107C YER107C YER107C YER107C YER107C 4932.YER107C YER107C SCRT_04585 YER107C YER107C YER107C tr|A6ZR63|A6ZR63_YEAS7 YER107C YER107C YER107C YER107C YER107C

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