SUPERFAMILY 1.75 HMM library and genome assignments server

Domain assignment for YER168C from Saccharomyces cerevisiae SGD

Domain architecture


Domain assignment details

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Strong hits

Sequence:  YER168C
Domain Number 1 Region: 203-319,390-542
Classification Level Classification E-value
Superfamily Poly A polymerase C-terminal region-like 5.36e-46
Family Poly A polymerase C-terminal region-like 0.0013
Further Details:      
 
Domain Number 2 Region: 44-201
Classification Level Classification E-value
Superfamily Nucleotidyltransferase 3.49e-30
Family Poly A polymerase head domain-like 0.0038
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
transferase complex 1.423 31.69
RNA polymerase complex 1.998 31.69
nucleoplasm part 1.496 24.4
nuclear body 1.907 8.96
nucleolus 1.641 7.37

Protein sequence

External link(s) Locus: YER168C   Protein: S000000970
Sequence length 546
Comment CCA1 SGDID:S000000970, Chr V from 522664-521024, reverse complement, Verified ORF, "ATP (CTP):tRNA-specific tRNA nucleotidyltransferase; different forms targeted to the nucleus, cytosol, and mitochondrion are generated via the use of multiple transcriptional and translational start sites"
Sequence
MLRSTISLLMNSAAQKTMTNSNFVLNAPKITLTKVEQNICNLLNDYTDLYNQKYHNKPEP
LTLRITGGWVRDKLLGQGSHDLDIAINVMSGEQFATGLNEYLQQHYAKYGAKPHNIHKID
KNPEKSKHLETATTKLFGVEVDFVNLRSEKYTELSRIPKVCFGTPEEDALRRDATLNALF
YNIHKGEVEDFTKRGLQDLKDGVLRTPLPAKQTFLDDPLRVLRLIRFASRFNFTIDPEVM
AEMGDPQINVAFNSKISRERVGVEMEKILVGPTPLLALQLIQRAHLENVIFFWHNDSSVV
KFNEENCQDMDKINHVYNDNILNSHLKSFIELYPMFLEKLPILREKIGRSPGFQQNFILS
AILSPMANLQIIGNPKKKINNLVSVTESIVKEGLKLSKNDAAVIAKTVDSICSYEEILAK
FADRSQLKKSEIGIFLRNFNGEWETAHFASLSDAFLKIPKLETKKIELLFQNYNEFYSYI
FDNNLNNCHELKPIVDGKQMAKLLQMKPGPWLGKINNEAIRWQFDNPTGTDQELITHLKA
ILPKYL
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Identical sequences A6ZRC4 B3LRS8 B5VHU6 C7GS42 G2WD54 P21269 W7Q538 W7RG56
YER168C YER168C 4932.YER168C YER168C YER168C YER168C YER168C YER168C YER168C YER168C tr|A6ZRC4|A6ZRC4_YEAS7 YER168C YER168C YER168C 355313 YER168C YER168C YER168C SCRT_04642 YER168C

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