SUPERFAMILY 1.75 HMM library and genome assignments server

Domain assignment for YFL039C from Saccharomyces cerevisiae SGD

Domain architecture


Domain assignment details

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Strong hits

Sequence:  YFL039C
Domain Number 1 Region: 147-375
Classification Level Classification E-value
Superfamily Actin-like ATPase domain 8.64e-99
Family Actin/HSP70 0.00000000109
Further Details:      
 
Domain Number 2 Region: 4-153
Classification Level Classification E-value
Superfamily Actin-like ATPase domain 4.32e-67
Family Actin/HSP70 0.0000000969
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
actin filament 2.159 18.28
cation channel complex 2.046 15.96
SWI/SNF superfamily-type complex 2.178 14.87
endoplasmic reticulum part 1.431 14.34
chromosomal part 1.477 13.95
nuclear chromosome 1.73 13.95
chromatin 1.822 13.95
cilium 1.573 13.71
ciliary part 1.844 13.71
microtubule cytoskeleton 1.341 8.43

Protein sequence

External link(s) Locus: YFL039C   Protein: S000001855
Sequence length 375
Comment ACT1 SGDID:S000001855, Chr VI from 54695-54686,54377-53260, reverse complement, Verified ORF, "Actin, structural protein involved in cell polarization, endocytosis, and other cytoskeletal functions"
Sequence
MDSEVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGIMVGMGQKDSYVGDEAQS
KRGILTLRYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPMNPKSNREKMT
QIMFETFNVPAFYVSIQAVLSLYSSGRTTGIVLDSGDGVTHVVPIYAGFSLPHAILRIDL
AGRDLTDYLMKILSERGYSFSTTAEREIVRDIKEKLCYVALDFEQEMQTAAQSSSIEKSY
ELPDGQVITIGNERFRAPEALFHPSVLGLESAGIDQTTYNSIMKCDVDVRKELYGNIVMS
GGTTMFPGIAERMQKEITALAPSSMKVKIIAPPERKYSVWIGGSILASLTTFQQMWISKQ
EYDESGPSIVHHKCF
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Identical sequences A7A200 B3LUH2 C8Z7P3 G2WDA2 G8ZQZ4 N1PA17 P60009 P60010 P60011 W7PHN0 W7RKW5
YFL039C YFL039C YFL039C YFL039C YFL039C 1yag.A 4932.YFL039C gnl|GLV|CAGL0K12694g YFL039C YFL039C YFL039C YFL039C YFL039C 1yagA tr|A7A200|A7A200_YEAS7 YFL039C YFL039C SCRT_05509 YFL039C YFL039C YFL039C YFL039C

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