SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for YGL136C from Saccharomyces cerevisiae SGD

Domain architecture

Domain assignment details

show help)
Strong hits

Sequence:  YGL136C
Domain Number 1 Region: 14-121,196-310
Classification Level Classification E-value
Superfamily S-adenosyl-L-methionine-dependent methyltransferases 4.94e-26
Family RNA methyltransferase FtsJ 0.0014
Further Details:      

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
protein methylation 2.111 81.26
RNA modification 2.2 65.25
mRNA metabolic process 1.675 34.63
mRNA processing 1.844 34.63
ncRNA processing 1.829 34.29
RNA processing 1.496 31.16
ncRNA metabolic process 1.489 29.84
DNA modification 1.942 26.81
peptidyl-amino acid modification 1.43 26.74
posttranscriptional regulation of gene expression 1.566 20.89
Cellular Component IC (bits) H-Score
transferase complex 1.334 15.89
host intracellular part 1.994 15.89
methyltransferase complex 2.1 11.75
nuclear transcription factor complex 1.972 8.73
nucleolus 1.723 8.28
mitochondrial envelope 1.596 7.19
organelle inner membrane 1.689 7.19
chromosomal part 1.456 6.99
chromatin 1.848 6.99
trans-Golgi network 1.734 6.13

Protein sequence

External link(s) Locus: YGL136C   Protein: S000003104
Sequence length 320
Comment MRM2 SGDID:S000003104, Chr VII from 253864-252902, reverse complement, Verified ORF, "Mitochondrial 2' O-ribose methyltransferase, required for methylation of U(2791) in 21S rRNA; MRM2 deletion confers thermosensitive respiration and loss of mitochondrial DNA; has similarity to Spb1p and Trm7p, and to E. coli FtsJ/RrmJ"
Download sequence
Identical sequences B3LHJ4 C7GPR6 C8Z8B4 E7KCE1 E7KNB2 E7LU84 E7NHJ2 E7QEL2 H0GFU4 N1P3D6 P53123 W7Q458 W7QYY6
YGL136C YGL136C YGL136C YGL136C YGL136C YGL136C SCRT_01130 YGL136C YGL136C YGL136C YGL136C YGL136C YGL136C YGL136C 4932.YGL136C YGL136C YGL136C

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]