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Domain assignment for YGR118W from Saccharomyces cerevisiae SGD

Domain architecture


Domain assignment details

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Strong hits

Sequence:  YGR118W
Domain Number 1 Region: 22-143
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 8.14e-35
Family Cold shock DNA-binding domain-like 0.0018
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Locus: YGR118W   Protein: S000003350
Sequence length 145
Comment RPS23A SGDID:S000003350, Chr VII from 726978-727042,727363-727735, Verified ORF, "Ribosomal protein 28 (rp28) of the small (40S) ribosomal subunit, required for translational accuracy; nearly identical to Rps23Bp and similar to E. coli S12 and rat S23 ribosomal proteins; deletion of both RPS23A and RPS23B is lethal"
Sequence
MGKGKPRGLNSARKLRVHRRNNRWAENNYKKRLLGTAFKSSPFGGSSHAKGIVLEKLGIE
SKQPNSAIRKCVRVQLIKNGKKVTAFVPNDGCLNFVDENDEVLLAGFGRKGKAKGDIPGV
RFKVVKVSGVSLLALWKEKKEKPRS
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Identical sequences A0A0L8RJG3 A0A0L8VQ55 A0A0W0DA40 A0A250WCI4 A6ZUD1 B3LIB1 C8ZJF4 G2WEK0 G8ZX19 H2ANL8 N1P5W3 P0CX29 P0CX30 P0CY39 P0CY40 Q6FLA8 Q6YIA3
YPR132W YGR118W YPR132W YGR118W YPR132W YPR132W YGR118W YPR132W YGR118W YPR132W YPR132W 4932.YGR118W 4932.YPR132W YGR118W YGR118W YPR132W SCRT_00901 SCRT_02607 gnl|GLV|CAGL0L04840g YGR118W YPR132W YGR118W YPR132W YGR118W YPR132W YGR118W YPR132W YGR118W YPR132W YGR118W YPR132W YGR118W YPR132W YPR132W YPR132W NP_011633.3.97178 NP_015457.1.97178 XP_003674109.1.18554 XP_003676523.1.18554 XP_003682374.1.64532 XP_003955103.1.94514 XP_003956360.1.94514 XP_018219136.1.77003 XP_018222326.1.77003 XP_448986.1.27851 YGR118W YPR132W YGR118W YPR132W YGR118W YPR132W YGR118W YPR132W YGR118W YPR132W YGR118W YPR132W YGR118W tr|A6ZUD1|A6ZUD1_YEAS7 3j6x.23 3j6y.23 3j77.23 3j78.23 4v6i.AL 4v7r.AP 4v7r.CP 4v88.AX 4v88.CX 4v8y.AX 4v8z.AX 5juo.UB 5jup.UB 5jus.UB 5jut.UB 5juu.UB 5ll6.c 5mc6.c 5tzs.r 5wyj.SY 5wyk.SY 000141484|e3izbL1|2.1.1.373|L:1-145 001436100|e4v6iAL1|2.1.1.373|AL:1-145

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