SUPERFAMILY 1.75 HMM library and genome assignments server

Domain assignment for YHR218W-A from Saccharomyces cerevisiae SGD

Domain architecture


Domain assignment details

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Strong hits

Sequence:  YHR218W-A
Domain Number 1 Region: 2-58
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 0.000000152
Family Tandem AAA-ATPase domain 0.011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
microtubule cytoskeleton 1.341 26.13
microtubule associated complex 1.998 25.22
chromosomal part 1.477 20.37
cilium 1.573 16.39
nucleoplasm part 1.496 15.57
endosome 1.323 14.1
extrinsic component of plasma membrane 1.992 13.97
extracellular organelle 1.606 12.21
SWI/SNF superfamily-type complex 2.178 9.4
lateral plasma membrane 1.933 9.04

Protein sequence

External link(s) Locus: YHR218W-A   Protein: S000028786
Sequence length 105
Comment YHR218W-A SGDID:S000028786, Chr VIII from 559932-560249, Dubious ORF, "Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data"
Sequence
MQVLIGTKLVTEGIDIKQLMMVIMLDNRLNIIELIQGVGRLRDGGLCYLLSRKNSWAARN
RKGELPPIKEGCITEQVREFYGLESKKGKKGPACWMLWLQDRPVC
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Identical sequences Q3E7Y4
YBL112C YHR218W-A 4932.YBL112C 4932.YHR218W-A YBL112C YHR218W-A YBL112C YHR218W-A

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