SUPERFAMILY 1.75 HMM library and genome assignments server

Domain assignment for YJR064W from Saccharomyces cerevisiae SGD

Domain architecture


Domain assignment details

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Strong hits

Sequence:  YJR064W
Domain Number 1 Region: 38-168,437-556
Classification Level Classification E-value
Superfamily GroEL equatorial domain-like 1.83e-79
Family Group II chaperonin (CCT, TRIC), ATPase domain 0.0022
Further Details:      
 
Domain Number 2 Region: 236-410
Classification Level Classification E-value
Superfamily GroEL apical domain-like 2.09e-47
Family Group II chaperonin (CCT, TRIC), apical domain 0.00042
Further Details:      
 
Domain Number 3 Region: 174-240,401-436
Classification Level Classification E-value
Superfamily GroEL-intermediate domain like 2.38e-29
Family Group II chaperonin (CCT, TRIC), intermediate domain 0.0037
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
cell body 1.498 31.75
cytosol 1.301 29.13
secretory granule 1.818 10.97
sperm part 2.197 10.95
plastid 1.6 6.47
chloroplast part 1.896 6.47
plastid stroma 2.025 5.04
endocytic vesicle 1.433 4.57
organelle inner membrane 1.669 4.45
mitochondrial envelope 1.573 4.45
Molecular Function IC (bits) H-Score
unfolded protein binding 2.182 65.12
ATPase activity 1.445 5.07
purine ribonucleoside triphosphate binding 1.455 4.36
purine ribonucleoside binding 1.422 4.36
adenyl ribonucleotide binding 1.481 4.05
Biological Process IC (bits) H-Score
toxin transport 2.227 103.72
protein folding 1.901 58.83
fertilization 2.034 56.09
muscle contraction 1.392 29.1
circulatory system process 1.653 29.1
phosphatidylinositol metabolic process 2.061 26.3
response to cytokine 1.504 25.11
cellular response to hormone stimulus 1.612 25.11
cytokine-mediated signaling pathway 1.951 25.11
mitotic cell cycle process 1.491 17.43

Protein sequence

External link(s) Locus: YJR064W   Protein: S000003825
Sequence length 562
Comment CCT5 SGDID:S000003825, Chr X from 555907-557595, Verified ORF, "Subunit of the cytosolic chaperonin Cct ring complex, related to Tcp1p, required for the assembly of actin and tubulins in vivo"
Sequence
MAARPQQPPMEMPDLSNAIVAQDEMGRPFIIVKDQGNKKRQHGLEAKKSHILAARSVASI
IKTSLGPRGLDKILISPDGEITITNDGATILSQMELDNEIAKLLVQLSKSQDDEIGDGTT
GVVVLASALLDQALELIQKGIHPIKIANGFDEAAKLAISKLEETCDDISASNDELFRDFL
LRAAKTSLGSKIVSKDHDRFAEMAVEAVINVMDKDRKDVDFDLIKMQGRVGGSISDSKLI
NGVILDKDFSHPQMPKCVLPKEGSDGVKLAILTCPFEPPKPKTKHKLDISSVEEYQKLQT
YEQDKFKEMIDDVKKAGADVVICQWGFDDEANHLLLQNDLPAVRWVGGQELEHIAISTNG
RIVPRFQDLSKDKLGTCSRIYEQEFGTTKDRMLIIEQSKETKTVTCFVRGSNKMIVDEAE
RALHDSLCVVRNLVKDSRVVYGGGAAEVTMSLAVSEEADKQRGIDQYAFRGFAQALDTIP
MTLAENSGLDPIGTLSTLKSKQLKEKISNIGVDCLGYGSNDMKELFVVDPFIGKKQQILL
ATQLCRMILKIDNVIISGKDEY
Download sequence
Identical sequences A6ZQ23 B3LQF2 B5VLL7 C8ZBL2 E7KEG6 E7KQJ6 E7QGT7 G2WH69 H0GIR9 N1P3H3 P40413 W7PPZ5 W7RCI3
YJR064W YJR064W YJR064W SCRT_03717 YJR064W tr|A6ZQ23|A6ZQ23_YEAS7 YJR064W YJR064W YJR064w___KOG0357 YJR064W YJR064W YJR064W YJR064W YJR064W 3p9d.E 3p9d.M 3p9e.e 3p9e.m 4aol.E 4aol.e 4apk.E 4apk.e 4d8q.E 4d8q.M 4d8r.e 4d8r.m YJR064W 4932.YJR064W

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