SUPERFAMILY 1.75 HMM library and genome assignments server

Domain assignment for YJR065C from Saccharomyces cerevisiae SGD

Domain architecture

Domain assignment details

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Strong hits

Sequence:  YJR065C
Domain Number 1 Region: 201-443
Classification Level Classification E-value
Superfamily Actin-like ATPase domain 5.02e-71
Family Actin/HSP70 0.0000000673
Further Details:      
Domain Number 2 Region: 5-39,80-193
Classification Level Classification E-value
Superfamily Actin-like ATPase domain 2.98e-43
Family Actin/HSP70 0.00000588
Further Details:      

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
actin filament 2.158 18.3
cation channel complex 2.038 15.97
SWI/SNF superfamily-type complex 2.177 14.97
endoplasmic reticulum part 1.429 14.05
chromatin 1.906 13.94
nuclear chromosome 1.723 13.94
chromosomal part 1.478 13.94
cilium part 1.917 13.72
cilium 1.61 13.72
microtubule cytoskeleton 1.333 8.5

Protein sequence

External link(s) Locus: YJR065C   Protein: S000003826
Sequence length 449
Comment ARP3 SGDID:S000003826, Chr X from 559151-557802, reverse complement, Verified ORF, "Essential component of the Arp2/3 complex, which is a highly conserved actin nucleation center required for the motility and integrity of actin patches; involved in endocytosis and membrane growth and polarity"
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Identical sequences P47117
YJR065C YJR065C YJR065C YJR065C 4932.YJR065C

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