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Domain assignment for YJR145C from Saccharomyces cerevisiae SGD

Domain architecture


Domain assignment details

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Strong hits

Sequence:  YJR145C
Domain Number 1 Region: 53-93
Classification Level Classification E-value
Superfamily Alpha-L RNA-binding motif 0.0000125
Family YbcJ-like 0.077
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Locus: YJR145C   Protein: S000003906
Sequence length 261
Comment RPS4A SGDID:S000003906, Chr X from 703059-703046,702789-702018, reverse complement, Verified ORF, "Protein component of the small (40S) ribosomal subunit; mutation affects 20S pre-rRNA processing; identical to Rps4Bp and has similarity to rat S4 ribosomal protein"
Sequence
MARGPKKHLKRLAAPHHWLLDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGRE
VKAILMQRHVKVDGKVRTDTTYPAGFMDVITLDATNENFRLVYDVKGRFAVHRITDEEAS
YKLGKVKKVQLGKKGVPYVVTHDGRTIRYPDPNIKVNDTVKIDLASGKITDFIKFDAGKL
VYVTGGRNLGRIGTIVHKERHDGGFDLVHIKDSLDNTFVTRLNNVFVIGEQGKPYISLPK
GKGIKLSIAEERDRRRAQQGL
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Identical sequences A0A0L8VQB1 A0A250WI69 A6ZQA2 B3LQM5 C8ZA04 G2WFS7 N1P4X8 P0CX35 P0CX36
YHR203C YJR145C YHR203C YHR203C YJR145C YHR203C SCRT_03797 SCRT_04917 3j6x.S4 3j6y.S4 3j77.S4 3j78.S4 4v6i.AD 4v88.AE 4v88.CE 4v8y.AE 4v8z.AE 5juo.BB 5jup.BB 5jus.BB 5jut.BB 5juu.BB 5ll6.S 5mc6.S 5tzs.5 5wyj.SF 5wyk.SF YHR203C YJR145C tr|A6ZQA2|A6ZQA2_YEAS7 4932.YHR203C 4932.YJR145C YHR203C YJR145C YHR203C YJR145C YR102 YJR145C YHR203C YJR145C YHR203C YJR145C YHR203C YJR145C YHR203C YJR145C YHR203C YJR145C YHR203C YJR145C YHR203C YJR145C YHR203C YJR145C YHR203C YJR145C NP_012073.1.97178 NP_012679.3.97178 YHR203C YHR203C YJR145C YHR203C YJR145C

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