SUPERFAMILY 1.75 HMM library and genome assignments server

Domain assignment for YKL186C from Saccharomyces cerevisiae SGD

Domain architecture

Domain assignment details

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Strong hits

Sequence:  YKL186C
Domain Number 1 Region: 14-178
Classification Level Classification E-value
Superfamily NTF2-like 4.82e-65
Family NTF2-like 0.0000000191
Further Details:      

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
nucleoplasm part 1.496 40.61
axon 1.505 23.61
microtubule cytoskeleton 1.341 20.02
sarcoplasmic reticulum 1.986 14.67
nuclear envelope 1.691 13.98
cell-cell junction 1.378 13.84
intercalated disc 1.962 13.84
main axon 2.046 13.09
organelle inner membrane 1.669 11.85
mitochondrial envelope 1.573 11.85

Protein sequence

External link(s) Locus: YKL186C   Protein: S000001669
Sequence length 184
Comment MTR2 SGDID:S000001669, Chr XI from 93303-92749, reverse complement, Verified ORF, "mRNA transport regulator, essential nuclear protein; Mex67p and Mtr2p form a mRNA export complex which binds to RNA"
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Identical sequences A6ZZD9 B3LQR9 C7GJ23 C8ZBZ0 E7KEP6 E7KQU8 E7LWN1 E7QH34 G2WHK6 H0GJJ6 N1NZM2 P34232 W7PGD5 W7QW84
YKL186C YKL186C YKL186C YKL186C YKL186C YKL186C tr|A6ZZD9|A6ZZD9_YEAS7 YKL186C SCRT_03843 YT82 YKL186C YKL186C YKL186C YKL186C YKL186C YKL186C YKL186C 4932.YKL186C YKL186C 1of5B YKL186C YKL186C YKL186C YKL186C 1of5.B YKL186C YKL186C YKL186C

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