SUPERFAMILY 1.75 HMM library and genome assignments server

Domain assignment for YKR034W from Saccharomyces cerevisiae SGD

Domain architecture


Domain assignment details

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Strong hits

Sequence:  YKR034W
Domain Number 1 Region: 27-87
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 1.52e-17
Family Erythroid transcription factor GATA-1 0.00044
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
cell-substrate junction 1.6 32
adherens junction 1.365 23.87
actin filament bundle 1.974 18.4
integral component of plasma membrane 1.462 13.46
receptor complex 1.511 13.46
chromatin 1.822 8.6
cell-cell junction 1.378 8.46
synapse part 1.451 7.05
neuronal postsynaptic density 2.046 7.05
nuclear chromosome 1.73 6.61

Protein sequence

External link(s) Locus: YKR034W   Protein: S000001742
Sequence length 269
Comment DAL80 SGDID:S000001742, Chr XI from 506540-507349, Verified ORF, "Negative regulator of genes in multiple nitrogen degradation pathways; expression is regulated by nitrogen levels and by Gln3p; member of the GATA-binding family, forms homodimers and heterodimers with Deh1p"
Sequence
MVLSDSLKLPSPTLSAAAGVDDCDGEDHPTCQNCFTVKTPLWRRDEHGTVLCNACGLFLK
LHGEPRPISLKTDTIKSRNRKKLNNNNVNTNANTHSNDPNKIFKRKKRLLTTGGGSLPTN
NPKVSILEKFMVSGSIKPLLKPKETVPNTKECSTQRGKFSLDPCEPSGKNYLYQINGSDI
YTSNIELTRLPNLSTLLEPSPFSDSAVPEIELTWKLHNEEEVIKLKTKISELELVTDLYK
KHIFQLNEKCKQLEVELHSRASVQSHPQH
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Identical sequences B3LRB5 B5VMI1 C8ZCJ8 E7KR64 E7LX02 E7QHF9 G2WI64 H0GJF3 N1P0H4 P26343 W7PDY2 W7R8W0
YKR034W CX00006 YKR034W YKR034W YKR034W YKR034W YKR034W 4932.YKR034W YKR034W YKR034W YKR034W YKR034W YKR034W SCRT_04052 YKR034W YKR034W YKR034W YKR034W YKR034W YKR034W

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