SUPERFAMILY 1.75 HMM library and genome assignments server

Domain assignment for YLR105C from Saccharomyces cerevisiae SGD

Domain architecture


Domain assignment details

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Strong hits

Sequence:  YLR105C
Domain Number 1 Region: 258-336
Classification Level Classification E-value
Superfamily tRNA-intron endonuclease catalytic domain-like 2.09e-25
Family tRNA-intron endonuclease catalytic domain-like 0.0025
Further Details:      
 

Protein sequence

External link(s) Locus: YLR105C   Protein: S000004095
Sequence length 377
Comment SEN2 SGDID:S000004095, Chr XII from 348181-347048, reverse complement, Verified ORF, "Subunit of the tRNA splicing endonuclease, which is composed of Sen2p, Sen15p, Sen34p, and Sen54p; Sen2p contains the active site for tRNA 5' splice site cleavage and has similarity to Sen34p and to Archaeal tRNA splicing endonuclease"
Sequence
MSKGRVNQKRYKYPLPIHPVDDLPELILHNPLSWLYWAYRYYKSTNALNDKVHVDFIGDT
TLHITVQDDKQMLYLWNNGFFGTGQFSRSEPTWKARTEARLGLNDTPLHNRGGTKSNTET
EMTLEKVTQQRRLQRLEFKKERAKLERELLELRKKGGHIDEENILLEKQRESLRKFKLKQ
TEDVGIVAQQQDISESNLRDEDNNLLDENGDLLPLESLELMPVEAMFLTFALPVLDISPA
CLAGKLFQFDAKYKDIHSFVRSYVIYHHYRSHGWCVRSGIKFGCDYLLYKRGPPFQHAEF
CVMGLDHDVSKDYTWYSSIARVVGGAKKTFVLCYVERLISEQEAIALWKSNNFTKLFNSF
QVGEVLYKRWVPGRNRD
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Identical sequences A7A109 B3LT73 C7GQS8 C8ZD76 E7KRN4 G2WIU8 H0GK70 P16658
YLR105C YLR105C YLR105C YLR105C YLR105C CX00052 YLR105C 4932.YLR105C YLR105C SCRT_05090 YLR105C YLR105C tr|A7A109|A7A109_YEAS7 YLR105C YLR105C YLR105C YLR105C

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