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Domain assignment for YLR136C from Saccharomyces cerevisiae SGD

Domain architecture

Domain assignment details

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Strong hits

Sequence:  YLR136C
Domain Number 1 Region: 169-200
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.000000000563
Family CCCH zinc finger 0.00087
Further Details:      
Domain Number 2 Region: 206-235
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.000000804
Family CCCH zinc finger 0.0028
Further Details:      

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
cytoplasmic ribonucleoprotein granule 1.929 18.28
intracellular ribonucleoprotein complex 1.368 15.09
exosome (RNase complex) 2.182 8.87
spliceosomal complex 1.952 6.38
chromosomal part 1.512 4.9
chromatin 1.876 4.9
nucleoplasm part 1.369 4.81

Protein sequence

External link(s) Locus: YLR136C   Protein: S000004126
Sequence length 285
Comment TIS11 SGDID:S000004126, Chr XII from 416659-415802, reverse complement, Verified ORF, "mRNA-binding protein expressed during iron starvation; binds to a sequence element in the 3'-untranslated regions of specific mRNAs to mediate their degradation; involved in iron homeostasis"
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Identical sequences A7A135 B3LT97 C7GMI8 C8ZDA5 E7KFK4 E7KRQ1 G2WIX5 H0GK93 N1NZQ0 P47977
YLR136C YLR136C 4932.YLR136C YLR136C YLR136C YLR136C SCRT_05116 YLR136C YLR136C YLR136C YLR136C YLR136C YLR136C YLR136C YLR136C YLR136C YLR136C tr|A7A135|A7A135_YEAS7 YLR136C YLR136C

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