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Domain assignment for YLR186W from Saccharomyces cerevisiae SGD

Domain architecture


Domain assignment details

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Strong hits

Sequence:  YLR186W
Domain Number 1 Region: 29-251
Classification Level Classification E-value
Superfamily alpha/beta knot 1.16e-82
Family EMG1/NEP1-like 0.00000000118
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
RNA modification 2.218 39.36
ribosome biogenesis 1.853 21.36
ribonucleoprotein complex biogenesis 1.7 9.26
ncRNA processing 1.837 6.34
RNA processing 1.499 6
rRNA metabolic process 2.071 5.85
ncRNA metabolic process 1.491 5.46

Protein sequence

External link(s) Locus: YLR186W   Protein: S000004176
Sequence length 252
Comment EMG1 SGDID:S000004176, Chr XII from 523634-524392, Verified ORF, "Member of the alpha/beta knot fold methyltransferase superfamily; required for maturation of 18S rRNA and for 40S ribosome production; interacts with RNA and with S-adenosylmethionine; associates with spindle/microtubules; forms homodimers"
Sequence
MVEDSRVRDALKGGDQKALPASLVPQAPPVLTSKDKITKRMIVVLAMASLETHKISSNGP
GGDKYVLLNCDDHQGLLKKMGRDISEARPDITHQCLLTLLDSPINKAGKLQVYIQTSRGI
LIEVNPTVRIPRTFKRFSGLMVQLLHKLSIRSVNSEEKLLKVIKNPITDHLPTKCRKVTL
SFDAPVIRVQDYIEKLDDDESICVFVGAMARGKDNFADEYVDEKVGLSNYPLSASVACSK
FCHGAEDAWNIL
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Identical sequences A7A176 B3RH77 B5VNA4 C7GIX3 C8ZDF7 E7KG20 E7LXN5 E7Q6X8 G2WJ18 N1P6S0 Q06287
YLR186W YLR186W YLR186W tr|A7A176|A7A176_YEAS7 YLR186W YLR186W YLR186W YLR186W YLR186W YLR186W SCRT_04146 YLR186W YLR186W YLR186W YLR186W YLR186W YLR186W YLR186W 4932.YLR186W YLR186W YLR186W YLR186W YLR186W 355476 YR105 YLR186W YLR186W 5jpq.e 5jpq.f 5tzs.j 5tzs.k 5wyj.E1 5wyj.E2 5wyk.E1 5wyk.E2

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