SUPERFAMILY 1.75 HMM library and genome assignments server

Domain assignment for YLR191W from Saccharomyces cerevisiae SGD

Domain architecture


Domain assignment details

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Strong hits

Sequence:  YLR191W
Domain Number 1 Region: 298-375
Classification Level Classification E-value
Superfamily SH3-domain 5.78e-20
Family SH3-domain 0.0000107
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
cell leading edge 1.449 36.33
adherens junction 1.365 31.34
cell cortex 1.627 27.69
apicolateral plasma membrane 2.218 24.17
cell-cell junction 1.378 23.67
filtration diaphragm 2.218 23.67
cation channel complex 2.046 21.62
synapse part 1.451 20.01
transferase complex 1.423 15.85
cytosol 1.301 15.85

Protein sequence

External link(s) Locus: YLR191W   Protein: S000004181
Sequence length 386
Comment PEX13 SGDID:S000004181, Chr XII from 537274-538434, Verified ORF, "Integral peroxisomal membrane required for the translocation of peroxisomal matrix proteins, interacts with the PTS1 signal recognition factor Pex5p and the PTS2 signal recognition factor Pex7p, forms a complex with Pex14p and Pex17p"
Sequence
MSSTAVPRPKPWETSASLEEPQRNAQSLSAMMTSNQQDSRPTEESNNSNSASESAPEVLP
RPAALNSSGTYGESNTIPGIYGNSNYGIPYDNNPYSMNSIYGNSIGRYGYGGSYYGNNYG
SFYGGGYGAGAGYGMNNGSGLGESTKATFQLIESLIGAVTGFAQMLESTYMATHNSFFTM
ISVAEQFGNLKEMLGSFFGIFAIMKFLKKILYRATKGRLGIPPKNFAESEGSKNKLIEDF
QKFNDSGTINSNEKATRRKISWKPLLFFLMAVFGFPYLLNKFITKLQTSGTIRASQGNGS
EPIDPSKLEFARALYDFVPENPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIG
YIPYNYIEIIKRRKKIEHVDDETRTH
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Identical sequences B5VNB0 C7GIX8 N1P6S5 P80667 W7PPL1
4932.YLR191W YLR191W YLR191W YLR191W YLR191W YLR191W YLR191W YLR191W YLR191W

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