SUPERFAMILY 1.75 HMM library and genome assignments server

Domain assignment for YLR395C from Saccharomyces cerevisiae SGD

Domain architecture


Domain assignment details

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Strong hits

Sequence:  YLR395C
Domain Number 1 Region: 29-74
Classification Level Classification E-value
Superfamily Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) 3.27e-06
Family Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) 0.0038
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
mitochondrial inner membrane 1.751 22.19
mitochondrial envelope 1.57 18.81
respiratory chain 2.14 15.44
organelle inner membrane 1.672 15.1
Biological Process IC (bits) H-Score
cellular respiration 1.869 14.22
generation of precursor metabolites and energy 1.508 8.9
oxidation-reduction process 1.418 7.05

Protein sequence

External link(s) Locus: YLR395C   Protein: S000004387
Sequence length 78
Comment COX8 SGDID:S000004387, Chr XII from 909965-909729, reverse complement, Verified ORF, "Subunit VIII of cytochrome c oxidase, which is the terminal member of the mitochondrial inner membrane electron transport chain"
Sequence
MLCQQMIRTTAKRSSNIMTRPIIMKRSVHFKDGVYENIPFKVKGRKTPYALSHFGFFAIG
FAVPFVACYVQLKKSGAF
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Identical sequences A7A1S0 B3RHR0 C7GXJ9 G2WJL0 N1P060 P04039 W7PQ29
YLR395C YLR395C YLR395C YLR395C YLR395C YLR395C YLR395C YLR395C YLR395C YLR395C 4932.YLR395C YLR395C SCRT_04336 YLR395C YLR395C YLR395C tr|A7A1S0|A7A1S0_YEAS7 YLR395C YLR395C YLR395C YLR395C YLR395C YLR395C

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