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Domain assignment for YML001W from Saccharomyces cerevisiae SGD

Domain architecture


Domain assignment details

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Strong hits

Sequence:  YML001W
Domain Number 1 Region: 5-181
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 3.14e-54
Family G proteins 0.0000000545
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
actin cytoskeleton 1.332 27.17
transporter complex 1.655 21.75
cilium 1.616 21.53
chromosomal part 1.456 20.39
ciliary part 1.785 20.28
midbody 2.192 17.88
side of membrane 1.587 15.98
protein-DNA complex 1.891 15.71
endosome 1.317 12.57
plasma membrane protein complex 1.484 10.85

Protein sequence

External link(s) Locus: YML001W   Protein: S000004460
Sequence length 208
Comment YPT7 SGDID:S000004460, Chr XIII from 267174-267800, Verified ORF, "GTPase; GTP-binding protein of the rab family; required for homotypic fusion event in vacuole inheritance, for endosome-endosome fusion, similar to mammalian Rab7"
Sequence
MSSRKKNILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATM
QVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFP
FVILGNKIDAEESKKIVSEKSAQELAKSLGDIPLFLTSAKNAINVDTAFEEIARSALQQN
QADTEAFEDDYNDAINIRLDGENNSCSC
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Identical sequences A6ZM61 B3LLQ0 C7GLB9 C8ZEK6 E7LY88 E7QJ26 G2WK51 H0GLW6 P32939 W7PXU7 W7R6W6
ORFP:17339 tr|A6ZM61|A6ZM61_YEAS7 YML001W SCRT_01894 YML001W YML001W YML001W YML001W YML001W YML001W YML001w___KOG0394 YML001W YML001W YML001W 4932.YML001W YML001W YML001W YML001W YML001W YML001W YML001W YML001W YML001W

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